| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is apr [H]
Identifier: 197118735
GI number: 197118735
Start: 2731599
End: 2732291
Strand: Reverse
Name: apr [H]
Synonym: Gbem_2354
Alternate gene names: 197118735
Gene position: 2732291-2731599 (Counterclockwise)
Preceding gene: 197118736
Following gene: 197118734
Centisome position: 59.2
GC content: 61.47
Gene sequence:
>693_bases ATGAAATCTGTTCCTGAAGTCCCCTCGAACGCATCCCCGCAGGATATTCTTCGGCTCGGCTTGGAAGCCGCGGAAGGCCC GGTTAAACTGGCGTGCTCCTTTTCGTTGGAAGACGTCGCCATCATCGACCTGGCCAAAGCTGCCGGCCTGGAGATCGGCG TCTTCGCGCTGGATACCGGAAGGCTCAACGAGGAGACTTACGAGGTTGCCGACGCCATCTCGCAGCGCTTCGGCATCTCC ATCGACTGGTACTTCCCGCGGCATGAAGCGGTCGAAAAACTGGAAAGGGAAAAAGGGCTTTTCTCGTTCAGGGAATCGCT CGATAACCGCCACGAGTGCTGCCACATCAGAAAGGTGGAACCGCTGGGCCGGGCCCTTCAGGGACTCTCCGGGTGGATCA CCGGGATGCGCAGGGAGCACAACGTGACCCGCATCGACCTGAAATCGATCGAGCTCGACCAGTTGAACGGCGGCATCCTC AAGTTGAATCCGCTGCTGGACTGGAACGAGGAACAGCTTCTCGCGTACGTGCAGCAGCAGCGCCTGCCGCAGAACCGCCT TCTGAAAGAGGGTTACCGCTCCATCGGCTGCGCCCCCTGCACGCGCGCCGTGCAGCCGGGGGAGGACGCTCGGGCCGGCC GCTGGTGGTGGGAGAACCCGGAGCACAAAGAGTGCGGGTTGCACAGAAGATAG
Upstream 100 bases:
>100_bases TTTTCTTGACTGCTTTGGTTATATATTGTACAAGGTGGACAACGAAATTAATGGGTGTGGCGATCGCCGCTCCTGTAACG ACCTTGCAAAGGAAGCCGCT
Downstream 100 bases:
>100_bases GACGCTAACGACAGGGGGGATTGCCCGGTGGCAGCATCGGGCAGCCGTTACACAGCTTTGAAATGGGAACTCATATGACC ACACAATTGACCCATCTGCA
Product: adenosine 5'-phosphosulfate reductase
Products: NA
Alternate protein names: 3'-phosphoadenylylsulfate reductase; PAPS reductase, thioredoxin dependent; PAPS sulfotransferase; PAdoPS reductase [H]
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MKSVPEVPSNASPQDILRLGLEAAEGPVKLACSFSLEDVAIIDLAKAAGLEIGVFALDTGRLNEETYEVADAISQRFGIS IDWYFPRHEAVEKLEREKGLFSFRESLDNRHECCHIRKVEPLGRALQGLSGWITGMRREHNVTRIDLKSIELDQLNGGIL KLNPLLDWNEEQLLAYVQQQRLPQNRLLKEGYRSIGCAPCTRAVQPGEDARAGRWWWENPEHKECGLHRR
Sequences:
>Translated_230_residues MKSVPEVPSNASPQDILRLGLEAAEGPVKLACSFSLEDVAIIDLAKAAGLEIGVFALDTGRLNEETYEVADAISQRFGIS IDWYFPRHEAVEKLEREKGLFSFRESLDNRHECCHIRKVEPLGRALQGLSGWITGMRREHNVTRIDLKSIELDQLNGGIL KLNPLLDWNEEQLLAYVQQQRLPQNRLLKEGYRSIGCAPCTRAVQPGEDARAGRWWWENPEHKECGLHRR >Mature_230_residues MKSVPEVPSNASPQDILRLGLEAAEGPVKLACSFSLEDVAIIDLAKAAGLEIGVFALDTGRLNEETYEVADAISQRFGIS IDWYFPRHEAVEKLEREKGLFSFRESLDNRHECCHIRKVEPLGRALQGLSGWITGMRREHNVTRIDLKSIELDQLNGGIL KLNPLLDWNEEQLLAYVQQQRLPQNRLLKEGYRSIGCAPCTRAVQPGEDARAGRWWWENPEHKECGLHRR
Specific function: Reduction of activated sulfate into sulfite [H]
COG id: COG0175
COG function: function code EH; 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PAPS reductase family. CysH subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789121, Length=211, Percent_Identity=28.436018957346, Blast_Score=90, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6325425, Length=126, Percent_Identity=43.6507936507937, Blast_Score=96, Evalue=5e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011798 - InterPro: IPR004511 - InterPro: IPR002500 - InterPro: IPR014729 [H]
Pfam domain/function: PF01507 PAPS_reduct [H]
EC number: =1.8.4.8 [H]
Molecular weight: Translated: 26109; Mature: 26109
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSVPEVPSNASPQDILRLGLEAAEGPVKLACSFSLEDVAIIDLAKAAGLEIGVFALDTG CCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHCCCEEEEEEECCC RLNEETYEVADAISQRFGISIDWYFPRHEAVEKLEREKGLFSFRESLDNRHECCHIRKVE CCCHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHEHHCCCC PLGRALQGLSGWITGMRREHNVTRIDLKSIELDQLNGGILKLNPLLDWNEEQLLAYVQQQ HHHHHHHHHHHHHHHHHHCCCCEEEEECCEEHHHCCCCEEEECCCCCCCHHHHHHHHHHH RLPQNRLLKEGYRSIGCAPCTRAVQPGEDARAGRWWWENPEHKECGLHRR CCCHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKSVPEVPSNASPQDILRLGLEAAEGPVKLACSFSLEDVAIIDLAKAAGLEIGVFALDTG CCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHCCCEEEEEEECCC RLNEETYEVADAISQRFGISIDWYFPRHEAVEKLEREKGLFSFRESLDNRHECCHIRKVE CCCHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHEHHCCCC PLGRALQGLSGWITGMRREHNVTRIDLKSIELDQLNGGILKLNPLLDWNEEQLLAYVQQQ HHHHHHHHHHHHHHHHHHCCCCEEEEECCEEHHHCCCCEEEECCCCCCCHHHHHHHHHHH RLPQNRLLKEGYRSIGCAPCTRAVQPGEDARAGRWWWENPEHKECGLHRR CCCHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]