Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197118728

Identifier: 197118728

GI number: 197118728

Start: 2725670

End: 2726305

Strand: Reverse

Name: 197118728

Synonym: Gbem_2347

Alternate gene names: NA

Gene position: 2726305-2725670 (Counterclockwise)

Preceding gene: 197118729

Following gene: 197118727

Centisome position: 59.07

GC content: 59.59

Gene sequence:

>636_bases
ATGAGATCATCCGGCTACAAGCGCGCGAGCTATCTCGCCCTGTTCACTATTTTCTACAACGTCCTAGAAGGTCTCGTATC
CATGTGGATAGGGGCAGCCGACGAGACGCTGGCGCTCTTCGGCTTCGGGGCCGACTCGTTCATAGAGGTCATCTCCGCGG
TGGGCGTCTGGCACATGCTGCAGCGGATCAGGGCGAATGGTGGGGAGAGCCGCGACGAGTTCGAGCAGCGCGCCCTGAAG
ATCACCGGCGTCTCCTTCTACCTGCTGACGGCAGGGCTCGTGGCGACCGCTTTCCTCAACCTCTACCAGCACCATAAGCC
GGACACCACCTTTTGGGGCGTCGTCGTCTCCCTGGTCTCCGTCTCTTTCATGTGGTACCTCATCCGGCAGAAGACCGCCG
TGGGGATAGCGCTCAATTCGCCTGCGATTATGGCCGACGCCGCTTGTTCCCGCGCCTGCCTGTACTTCTCCCTGGCTTTG
TTGGTCTCCAGTGCAGGATACGAACTGACCGGTGTCGGAAGCCTGGATGCCATTGGAGCCATGCTCATCGGGTACCTGAG
TTTCAAGGAAGGAAGGGAGGCTTTTGCCAAAGCCAAGGGGATGTCATGTTCCTGCGGTTGCAGTTGCAGCCCATAG

Upstream 100 bases:

>100_bases
ATCCCTCTGTGCTGCAGGGGACAGATGAGGAAAAACTGTCCGCGATCCGCAGCATAAGGGACGCCATCAAAGAAAAGGTT
AAAACCTGGAGTGTCACGGT

Downstream 100 bases:

>100_bases
TTCATCCTTCAGTTGATCTGATTCTGCCGCGCCATGCTGTAGCAGCACTTCCCTTAGTTGCCACCCCTGTGGCGTTCCCC
GCAGTACCCCCCCCCTGAAG

Product: membrane protein

Products: NA

Alternate protein names: Integral Membrane Protein; Co/Zn/Cd Cation Transporter-Like Protein; Cation Efflux Family Protein; Co/Zn/Cd Cation Transporter; Co/Zn/Cd Cation Transporters-Like Protein

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MRSSGYKRASYLALFTIFYNVLEGLVSMWIGAADETLALFGFGADSFIEVISAVGVWHMLQRIRANGGESRDEFEQRALK
ITGVSFYLLTAGLVATAFLNLYQHHKPDTTFWGVVVSLVSVSFMWYLIRQKTAVGIALNSPAIMADAACSRACLYFSLAL
LVSSAGYELTGVGSLDAIGAMLIGYLSFKEGREAFAKAKGMSCSCGCSCSP

Sequences:

>Translated_211_residues
MRSSGYKRASYLALFTIFYNVLEGLVSMWIGAADETLALFGFGADSFIEVISAVGVWHMLQRIRANGGESRDEFEQRALK
ITGVSFYLLTAGLVATAFLNLYQHHKPDTTFWGVVVSLVSVSFMWYLIRQKTAVGIALNSPAIMADAACSRACLYFSLAL
LVSSAGYELTGVGSLDAIGAMLIGYLSFKEGREAFAKAKGMSCSCGCSCSP
>Mature_211_residues
MRSSGYKRASYLALFTIFYNVLEGLVSMWIGAADETLALFGFGADSFIEVISAVGVWHMLQRIRANGGESRDEFEQRALK
ITGVSFYLLTAGLVATAFLNLYQHHKPDTTFWGVVVSLVSVSFMWYLIRQKTAVGIALNSPAIMADAACSRACLYFSLAL
LVSSAGYELTGVGSLDAIGAMLIGYLSFKEGREAFAKAKGMSCSCGCSCSP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22772; Mature: 22772

Theoretical pI: Translated: 7.78; Mature: 7.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSSGYKRASYLALFTIFYNVLEGLVSMWIGAADETLALFGFGADSFIEVISAVGVWHML
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEECCHHHHHHHHHHHHHHHHH
QRIRANGGESRDEFEQRALKITGVSFYLLTAGLVATAFLNLYQHHKPDTTFWGVVVSLVS
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
VSFMWYLIRQKTAVGIALNSPAIMADAACSRACLYFSLALLVSSAGYELTGVGSLDAIGA
HHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHH
MLIGYLSFKEGREAFAKAKGMSCSCGCSCSP
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MRSSGYKRASYLALFTIFYNVLEGLVSMWIGAADETLALFGFGADSFIEVISAVGVWHML
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEECCHHHHHHHHHHHHHHHHH
QRIRANGGESRDEFEQRALKITGVSFYLLTAGLVATAFLNLYQHHKPDTTFWGVVVSLVS
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
VSFMWYLIRQKTAVGIALNSPAIMADAACSRACLYFSLALLVSSAGYELTGVGSLDAIGA
HHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHH
MLIGYLSFKEGREAFAKAKGMSCSCGCSCSP
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA