| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is secG [H]
Identifier: 197118720
GI number: 197118720
Start: 2715377
End: 2715775
Strand: Direct
Name: secG [H]
Synonym: Gbem_2339
Alternate gene names: 197118720
Gene position: 2715377-2715775 (Clockwise)
Preceding gene: 197118719
Following gene: 197118721
Centisome position: 58.84
GC content: 61.4
Gene sequence:
>399_bases ATGACAATTCTACTGGTAACCCTGCATATCGTGGTATGTTTTGCCCTCATCGTCGTGGTCCTGCTGCAGTCCGGCAAGGG GGCCGAGATGGGTGCATCCTTTGGCGCCAGCGGCAGCCAGTCGGTTTTCGGCGCTGGCGGCGGCAGCACCTTCATGAGCA AACTGACCACAAGTGCAGCAATCATTTTCATGCTTACCTCCCTGGCACTGGCTTTTGCTTCCGGCAAAGGCGGCGGCTCT TCCATCATGTCGAAAGCCCCCAAGGCTAAGCCGGCACCGATGGGCGGCTTGCCGCTGCAGCAGCCGGTCGCACCGGCAGC ACCGGGTAAAACAGCAGCACCTGCAGCCCCCGCTGCTCCCGCAGTACCTACAGCACCCGCAGCACCGGCACAGAAGTAG
Upstream 100 bases:
>100_bases TCTTTTGCCTCAATCGTGCGTTACAGTGAATAAATTCTTGGTTATTTACATCAAATATGCTAGAAAGTCTCTTTGAACAC TCTCGGAGGTAAGGCTTTAA
Downstream 100 bases:
>100_bases CGTCGAACAGAGATTAACTGTTGACATCTCTGTCAGCAGATGATAGAAAGTTGGTTCTTCTTGCCGAAGTGGTGGAATTG GTAGACACACCATCTTGAGG
Product: preprotein translocase subunit SecG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MTILLVTLHIVVCFALIVVVLLQSGKGAEMGASFGASGSQSVFGAGGGSTFMSKLTTSAAIIFMLTSLALAFASGKGGGS SIMSKAPKAKPAPMGGLPLQQPVAPAAPGKTAAPAAPAAPAVPTAPAAPAQK
Sequences:
>Translated_132_residues MTILLVTLHIVVCFALIVVVLLQSGKGAEMGASFGASGSQSVFGAGGGSTFMSKLTTSAAIIFMLTSLALAFASGKGGGS SIMSKAPKAKPAPMGGLPLQQPVAPAAPGKTAAPAAPAAPAVPTAPAAPAQK >Mature_131_residues TILLVTLHIVVCFALIVVVLLQSGKGAEMGASFGASGSQSVFGAGGGSTFMSKLTTSAAIIFMLTSLALAFASGKGGGSS IMSKAPKAKPAPMGGLPLQQPVAPAAPGKTAAPAAPAAPAVPTAPAAPAQK
Specific function: Involved in protein export. Participates in an early event of protein translocation [H]
COG id: COG1314
COG function: function code U; Preprotein translocase subunit SecG
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the secG family [H]
Homologues:
Organism=Escherichia coli, GI1789565, Length=122, Percent_Identity=35.2459016393443, Blast_Score=64, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004692 [H]
Pfam domain/function: PF03840 SecG [H]
EC number: NA
Molecular weight: Translated: 12688; Mature: 12557
Theoretical pI: Translated: 11.02; Mature: 11.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTILLVTLHIVVCFALIVVVLLQSGKGAEMGASFGASGSQSVFGAGGGSTFMSKLTTSAA CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHH IIFMLTSLALAFASGKGGGSSIMSKAPKAKPAPMGGLPLQQPVAPAAPGKTAAPAAPAAP HHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AVPTAPAAPAQK CCCCCCCCCCCC >Mature Secondary Structure TILLVTLHIVVCFALIVVVLLQSGKGAEMGASFGASGSQSVFGAGGGSTFMSKLTTSAA CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHH IIFMLTSLALAFASGKGGGSSIMSKAPKAKPAPMGGLPLQQPVAPAAPGKTAAPAAPAAP HHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AVPTAPAAPAQK CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]