| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is coaX
Identifier: 197118700
GI number: 197118700
Start: 2692630
End: 2693394
Strand: Reverse
Name: coaX
Synonym: Gbem_2319
Alternate gene names: 197118700
Gene position: 2693394-2692630 (Counterclockwise)
Preceding gene: 197118701
Following gene: 197118699
Centisome position: 58.36
GC content: 59.87
Gene sequence:
>765_bases TTGCTTTTGGTTATCGACGTCGGGAACAGCAACATCGTTCTCGGGATATACGATGAAGAACGCCTGGTCCGGGACTGGAG GGTATCCACCGACAAGTCCAAGACTATCGACGAGTACGGCATCTTGTTCCACGACCTGTTCCGCCTGGCGGACATCGTCT TCACCGACGTGAAGGACATCATCATCTCCTCGGTGGTGCCGACCCTAACCGGCGTGCTGGAGAAGCTCTCCCGCCAGTAC TTCAAGATTTCGCCTTACGTGGTCGGCCCCGGCATCAAGACCGGCATGCCGATCCACTACGATAACCCCAAGGAAGTCGG GGCGGACCGCATCGTTAACGCCATCGCCGGGTTCGAGAAGTACCGCACGGCGCTCATCATCGTCGATTTCGGCACCGCCA CCACCTTCGACTACGTCAACAAGAAGGGTGAGTACTGCGGCGGCGCCATCGCACCGGGGCTCGCCATCTCCATGGAGGCC CTGTTCATGAAGGCGAGCAAGCTGCCGCGGGTCGATATCGCCCGCCCCCCCAGCATCATCGCCAAGAACACGGTGAACTC CATGCAGGCCGGGATCTTCTTCGGCTACGTGGGGCTTGTGGACGGGATCGTGCAACGGATGAAAGGGGAGGGGAAGGAGA ACCCCAAGGTAATCGCCACCGGGGGGCTCGCCTCCCTGATAGCGCCTGAGTCCGTCACCATCGAGGAGGTGGACGAGTTC CTCACCTTGGAGGGGCTGCGCATCATCTACCAGAGGAATAAATAA
Upstream 100 bases:
>100_bases TCACGCAAAGCCGCGAAGGCGCAAAGAAAGACGAAACTAAATGAGTAGGTCTCGAAGGTTTGCTTTGCGCCTTTGCGGCT TTGCGTGAGGAGGTTCGGGT
Downstream 100 bases:
>100_bases GTAACCAACGCCCTCAGGGCACAAGGAGGAGGTCCCCCCATCGAGATTCGTACCGCCGGGTAGTTTGTTGTTGGTTTCGT CTGCTTTACTCAAGTCAGAT
Product: pantothenate kinase
Products: NA
Alternate protein names: PanK-III; Pantothenic acid kinase
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MLLVIDVGNSNIVLGIYDEERLVRDWRVSTDKSKTIDEYGILFHDLFRLADIVFTDVKDIIISSVVPTLTGVLEKLSRQY FKISPYVVGPGIKTGMPIHYDNPKEVGADRIVNAIAGFEKYRTALIIVDFGTATTFDYVNKKGEYCGGAIAPGLAISMEA LFMKASKLPRVDIARPPSIIAKNTVNSMQAGIFFGYVGLVDGIVQRMKGEGKENPKVIATGGLASLIAPESVTIEEVDEF LTLEGLRIIYQRNK
Sequences:
>Translated_254_residues MLLVIDVGNSNIVLGIYDEERLVRDWRVSTDKSKTIDEYGILFHDLFRLADIVFTDVKDIIISSVVPTLTGVLEKLSRQY FKISPYVVGPGIKTGMPIHYDNPKEVGADRIVNAIAGFEKYRTALIIVDFGTATTFDYVNKKGEYCGGAIAPGLAISMEA LFMKASKLPRVDIARPPSIIAKNTVNSMQAGIFFGYVGLVDGIVQRMKGEGKENPKVIATGGLASLIAPESVTIEEVDEF LTLEGLRIIYQRNK >Mature_254_residues MLLVIDVGNSNIVLGIYDEERLVRDWRVSTDKSKTIDEYGILFHDLFRLADIVFTDVKDIIISSVVPTLTGVLEKLSRQY FKISPYVVGPGIKTGMPIHYDNPKEVGADRIVNAIAGFEKYRTALIIVDFGTATTFDYVNKKGEYCGGAIAPGLAISMEA LFMKASKLPRVDIARPPSIIAKNTVNSMQAGIFFGYVGLVDGIVQRMKGEGKENPKVIATGGLASLIAPESVTIEEVDEF LTLEGLRIIYQRNK
Specific function: Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
COG id: COG1521
COG function: function code K; Putative transcriptional regulator, homolog of Bvg accessory factor
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the type III pantothenate kinase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): COAX_GEOBB (B5EF22)
Other databases:
- EMBL: CP001124 - RefSeq: YP_002139127.1 - ProteinModelPortal: B5EF22 - GeneID: 6782315 - GenomeReviews: CP001124_GR - KEGG: gbm:Gbem_2319 - HOGENOM: HBG634537 - OMA: PAIVVDF - ProtClustDB: PRK13321 - GO: GO:0005737 - HAMAP: MF_01274 - InterPro: IPR004619 - TIGRFAMs: TIGR00671
Pfam domain/function: PF03309 Bvg_acc_factor
EC number: =2.7.1.33
Molecular weight: Translated: 27938; Mature: 27938
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: ACT_SITE 109-109 BINDING 100-100 BINDING 132-132 BINDING 184-184
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLVIDVGNSNIVLGIYDEERLVRDWRVSTDKSKTIDEYGILFHDLFRLADIVFTDVKDI CEEEEEECCCEEEEEEECCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IISSVVPTLTGVLEKLSRQYFKISPYVVGPGIKTGMPIHYDNPKEVGADRIVNAIAGFEK HHHHHHHHHHHHHHHHHHHHEEECCEEECCCCCCCCCEECCCHHHHHHHHHHHHHHHHHH YRTALIIVDFGTATTFDYVNKKGEYCGGAIAPGLAISMEALFMKASKLPRVDIARPPSII HCEEEEEEECCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHH AKNTVNSMQAGIFFGYVGLVDGIVQRMKGEGKENPKVIATGGLASLIAPESVTIEEVDEF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHCCCCCCHHHHHHH LTLEGLRIIYQRNK HHHHHEEEEEECCC >Mature Secondary Structure MLLVIDVGNSNIVLGIYDEERLVRDWRVSTDKSKTIDEYGILFHDLFRLADIVFTDVKDI CEEEEEECCCEEEEEEECCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IISSVVPTLTGVLEKLSRQYFKISPYVVGPGIKTGMPIHYDNPKEVGADRIVNAIAGFEK HHHHHHHHHHHHHHHHHHHHEEECCEEECCCCCCCCCEECCCHHHHHHHHHHHHHHHHHH YRTALIIVDFGTATTFDYVNKKGEYCGGAIAPGLAISMEALFMKASKLPRVDIARPPSII HCEEEEEEECCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHH AKNTVNSMQAGIFFGYVGLVDGIVQRMKGEGKENPKVIATGGLASLIAPESVTIEEVDEF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHCCCCCCHHHHHHH LTLEGLRIIYQRNK HHHHHEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA