| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is fusA-1 [H]
Identifier: 197118699
GI number: 197118699
Start: 2690374
End: 2692479
Strand: Reverse
Name: fusA-1 [H]
Synonym: Gbem_2318
Alternate gene names: 197118699
Gene position: 2692479-2690374 (Counterclockwise)
Preceding gene: 197118700
Following gene: 197118698
Centisome position: 58.34
GC content: 61.92
Gene sequence:
>2106_bases ATGGGAAGGTATGAAACGGCAAAACTGCGGAACCTCGGAATTGTAGCCCACGGCGGTGCGGGCAAGACCTCGCTCGCCGA GGCCATCCTGTTCGACACAGGCATGATCGACCGACTGGGCCGCGTCGACGACGGCACCTCCACCATGGATTACGAGCCCG AGGAGGTCAAACGACGCATCTCCATCACCTCCTCCCTGGACCACTGCGAGTGGCACGGGTGCTCCATCCATCTGGTCGAC ACCCCGGGCTACGGCAACTTCATCGCCGACACCCGCGCCTGCATGAGAACCCTCGACTGCGCCGTCGTGATCCTCTCCGC CATCTCCGGCGTCAAGGTCCAGACCGAGGAGGTCTGGCAATGGGCCAATGAGTTCGAGATCCCGCGCATCGCCTTCGTCA ACAAGATGGACCGTGAGAGGGCCAACTTCTTCCGCGCCATCGATGATATGGAGAAGGCGCTGGGGGCGCGCGGCGTGGCG GTGCAGATACCGCTTGGGTCCGAGGAGAACTTCGAGGGGGTCATCGACCTGGTGCGCATGAAGGCGTACCGGTATCAAAA AGACGGGTCGGGGAAGTTCAGCGAGGGGGAGATCCCTGCCGACGACCTTGCCGAGGCGCAGCGCCTCAGGGACCTGATGG TCGAGACGGTGGCGGAGGCGTACGACGCGCTCACGGAGAAGTTCCTGGATACTGGGGAACTGACCGAGGAAGAGATCCTG GACGGGCTCAGGGTCGGTACCCTGAGAAGCACCTTTACCGCCGTCTTCTGCGGTTCGGCTACGGCAAACATAGGGATCGC CCAGCTTCTGGACGGGATCTGCGCTTACCTCCCGTCCCCCTTGGACCGCACCAAGGCGGTGGGAATCGATCCCAAGACCG AGCAGGTCATCGAGCGCGCCCCCTCGGAGAGCGAGCCGTTATCCGCGCTGGTGTTCAAGACCACCTCCGACCCCTACACC GGGAAGATCACCATCTTCAGGGTCTATTCCGGGGTGCTCAACTCCGATTCGCTGGTGTACAACTCCACCAAGGAAGTGCA GGAGAGGATCGGACAGATCTACGAGCTTGAGGGTAAAAAGCAGCACCCGATCAAGCAGGCCGTGGCGGGCGACATCGTCG CGGTGGCGAAGCTCAAAGAGACGGTCACCGGGGACACGCTCTGCGACGAGACGAAGCCGATCGTCTACGAGCCGGCCCAG CCGCTCCAGCCTGTCATCTCCTACGCCATCGAGCCCAAGACCAAGGCCGACGAGGACAAGATCCACTCGGCCCTGCAGCG CATGATCGAGGAGGATCCGACCATAGAGTCGCACCGCGACCCTCAGACCCGCGAGTTCATCATTTCGGGGATGGGGCAGG TGCACCTCGAGGTGATAGTCGAGAAGATGAAGCGTAAGTTCGGCGCGGACGTCCTCTTGAAAACCCCCAAGGTCCCGTAC CTGGAGACCATCCGCGGCAGCGCCAAGGTGCAGGGGAAATACAAGAAGCAGTCCGGCGGCCGCGGCCAGTACGGCGATTG CTGGATCGAACTCTCCCCGTTGCCGCGCGGCGAGGGGTACCTGTTCGAGGACAAGATCGTCGGCGGCGTCATTCCGCGCC AGTACATCCCGGCGGTAGACAAGGGGATCCAGGAGGCGGCCAAGGAAGGCTTCCTCGCCGGAAACCCTGTGGTGGACTTC AAGGTGGCTCTCTACGACGGCTCGTTCCATACCGTCGACTCGTCCGAGATGGCCTTCAAGGTGGCGGGTTCCATGGCCTT CAAGAAGGCGATGGAACAGTGCAAGCCGGTCCTTTTGGAGCCGATCGTCAACATGAAGATTACGGTCCCCGACGAGAACA TGGGGGACGTCATCGGCGATCTCAACTCCCGTCGCGGCAAGGTAGTCGGTGTCGAGCCCAAGGCGAACTCGCAGATCATC AGGAGCGTGGTCCCCATGTCCGAGGTGCTCACCTACTCGAACGACCTCCGTTCCATGACCAGCGACCGCGGCATGTTCAC CTCCGAGTTCTCTCACTATGAGGAGGTCCCGAGCCACCTGGCGCAGAAGATCATCCAGGAGGCGCTGGATCAAAAGGGTA ACGGCAACAACCATAAAAGCGCTTAG
Upstream 100 bases:
>100_bases TACCGCCGGGTAGTTTGTTGTTGGTTTCGTCTGCTTTACTCAAGTCAGATCTCGTTTCAGAGTAGGTCATCACTGATTTT CTATTCTAAGGGAGGGCACT
Downstream 100 bases:
>100_bases TTTGCGCTTAGCATAACGTGCCCGGTCGCTTCGAGACCGGGCACCGCCTTAATTCAACAGCAGATGCAAAAAGGGAGGAT GAGCTAGATGCAGAATCAAT
Product: elongation factor G
Products: GDP; phosphate
Alternate protein names: EF-G [H]
Number of amino acids: Translated: 701; Mature: 700
Protein sequence:
>701_residues MGRYETAKLRNLGIVAHGGAGKTSLAEAILFDTGMIDRLGRVDDGTSTMDYEPEEVKRRISITSSLDHCEWHGCSIHLVD TPGYGNFIADTRACMRTLDCAVVILSAISGVKVQTEEVWQWANEFEIPRIAFVNKMDRERANFFRAIDDMEKALGARGVA VQIPLGSEENFEGVIDLVRMKAYRYQKDGSGKFSEGEIPADDLAEAQRLRDLMVETVAEAYDALTEKFLDTGELTEEEIL DGLRVGTLRSTFTAVFCGSATANIGIAQLLDGICAYLPSPLDRTKAVGIDPKTEQVIERAPSESEPLSALVFKTTSDPYT GKITIFRVYSGVLNSDSLVYNSTKEVQERIGQIYELEGKKQHPIKQAVAGDIVAVAKLKETVTGDTLCDETKPIVYEPAQ PLQPVISYAIEPKTKADEDKIHSALQRMIEEDPTIESHRDPQTREFIISGMGQVHLEVIVEKMKRKFGADVLLKTPKVPY LETIRGSAKVQGKYKKQSGGRGQYGDCWIELSPLPRGEGYLFEDKIVGGVIPRQYIPAVDKGIQEAAKEGFLAGNPVVDF KVALYDGSFHTVDSSEMAFKVAGSMAFKKAMEQCKPVLLEPIVNMKITVPDENMGDVIGDLNSRRGKVVGVEPKANSQII RSVVPMSEVLTYSNDLRSMTSDRGMFTSEFSHYEEVPSHLAQKIIQEALDQKGNGNNHKSA
Sequences:
>Translated_701_residues MGRYETAKLRNLGIVAHGGAGKTSLAEAILFDTGMIDRLGRVDDGTSTMDYEPEEVKRRISITSSLDHCEWHGCSIHLVD TPGYGNFIADTRACMRTLDCAVVILSAISGVKVQTEEVWQWANEFEIPRIAFVNKMDRERANFFRAIDDMEKALGARGVA VQIPLGSEENFEGVIDLVRMKAYRYQKDGSGKFSEGEIPADDLAEAQRLRDLMVETVAEAYDALTEKFLDTGELTEEEIL DGLRVGTLRSTFTAVFCGSATANIGIAQLLDGICAYLPSPLDRTKAVGIDPKTEQVIERAPSESEPLSALVFKTTSDPYT GKITIFRVYSGVLNSDSLVYNSTKEVQERIGQIYELEGKKQHPIKQAVAGDIVAVAKLKETVTGDTLCDETKPIVYEPAQ PLQPVISYAIEPKTKADEDKIHSALQRMIEEDPTIESHRDPQTREFIISGMGQVHLEVIVEKMKRKFGADVLLKTPKVPY LETIRGSAKVQGKYKKQSGGRGQYGDCWIELSPLPRGEGYLFEDKIVGGVIPRQYIPAVDKGIQEAAKEGFLAGNPVVDF KVALYDGSFHTVDSSEMAFKVAGSMAFKKAMEQCKPVLLEPIVNMKITVPDENMGDVIGDLNSRRGKVVGVEPKANSQII RSVVPMSEVLTYSNDLRSMTSDRGMFTSEFSHYEEVPSHLAQKIIQEALDQKGNGNNHKSA >Mature_700_residues GRYETAKLRNLGIVAHGGAGKTSLAEAILFDTGMIDRLGRVDDGTSTMDYEPEEVKRRISITSSLDHCEWHGCSIHLVDT PGYGNFIADTRACMRTLDCAVVILSAISGVKVQTEEVWQWANEFEIPRIAFVNKMDRERANFFRAIDDMEKALGARGVAV QIPLGSEENFEGVIDLVRMKAYRYQKDGSGKFSEGEIPADDLAEAQRLRDLMVETVAEAYDALTEKFLDTGELTEEEILD GLRVGTLRSTFTAVFCGSATANIGIAQLLDGICAYLPSPLDRTKAVGIDPKTEQVIERAPSESEPLSALVFKTTSDPYTG KITIFRVYSGVLNSDSLVYNSTKEVQERIGQIYELEGKKQHPIKQAVAGDIVAVAKLKETVTGDTLCDETKPIVYEPAQP LQPVISYAIEPKTKADEDKIHSALQRMIEEDPTIESHRDPQTREFIISGMGQVHLEVIVEKMKRKFGADVLLKTPKVPYL ETIRGSAKVQGKYKKQSGGRGQYGDCWIELSPLPRGEGYLFEDKIVGGVIPRQYIPAVDKGIQEAAKEGFLAGNPVVDFK VALYDGSFHTVDSSEMAFKVAGSMAFKKAMEQCKPVLLEPIVNMKITVPDENMGDVIGDLNSRRGKVVGVEPKANSQIIR SVVPMSEVLTYSNDLRSMTSDRGMFTSEFSHYEEVPSHLAQKIIQEALDQKGNGNNHKSA
Specific function: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=698, Percent_Identity=33.3810888252149, Blast_Score=402, Evalue=1e-112, Organism=Homo sapiens, GI19923640, Length=708, Percent_Identity=29.6610169491525, Blast_Score=320, Evalue=3e-87, Organism=Homo sapiens, GI25306283, Length=392, Percent_Identity=34.4387755102041, Blast_Score=203, Evalue=4e-52, Organism=Homo sapiens, GI25306287, Length=288, Percent_Identity=37.5, Blast_Score=172, Evalue=1e-42, Organism=Homo sapiens, GI4503483, Length=855, Percent_Identity=21.4035087719298, Blast_Score=120, Evalue=4e-27, Organism=Homo sapiens, GI157426893, Length=216, Percent_Identity=26.3888888888889, Blast_Score=80, Evalue=6e-15, Organism=Escherichia coli, GI1789738, Length=693, Percent_Identity=46.7532467532467, Blast_Score=618, Evalue=1e-178, Organism=Escherichia coli, GI1790835, Length=507, Percent_Identity=24.4575936883629, Blast_Score=139, Evalue=5e-34, Organism=Escherichia coli, GI48994988, Length=131, Percent_Identity=32.0610687022901, Blast_Score=75, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17533571, Length=696, Percent_Identity=32.9022988505747, Blast_Score=386, Evalue=1e-107, Organism=Caenorhabditis elegans, GI17556745, Length=722, Percent_Identity=25.0692520775623, Blast_Score=234, Evalue=1e-61, Organism=Saccharomyces cerevisiae, GI6323098, Length=690, Percent_Identity=35.0724637681159, Blast_Score=418, Evalue=1e-117, Organism=Saccharomyces cerevisiae, GI6322359, Length=798, Percent_Identity=27.8195488721804, Blast_Score=294, Evalue=3e-80, Organism=Drosophila melanogaster, GI24582462, Length=697, Percent_Identity=34.0028694404591, Blast_Score=416, Evalue=1e-116, Organism=Drosophila melanogaster, GI221458488, Length=733, Percent_Identity=27.4215552523874, Blast_Score=253, Evalue=4e-67, Organism=Drosophila melanogaster, GI24585711, Length=150, Percent_Identity=32, Blast_Score=70, Evalue=6e-12, Organism=Drosophila melanogaster, GI24585713, Length=150, Percent_Identity=32, Blast_Score=70, Evalue=6e-12, Organism=Drosophila melanogaster, GI24585709, Length=150, Percent_Identity=32, Blast_Score=70, Evalue=7e-12,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR004540 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: 3.6.5.3
Molecular weight: Translated: 77327; Mature: 77196
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRYETAKLRNLGIVAHGGAGKTSLAEAILFDTGMIDRLGRVDDGTSTMDYEPEEVKRRI CCCCCCCHHHCCCEEEECCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHH SITSSLDHCEWHGCSIHLVDTPGYGNFIADTRACMRTLDCAVVILSAISGVKVQTEEVWQ HHHCCCCCCEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHH WANEFEIPRIAFVNKMDRERANFFRAIDDMEKALGARGVAVQIPLGSEENFEGVIDLVRM HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHH KAYRYQKDGSGKFSEGEIPADDLAEAQRLRDLMVETVAEAYDALTEKFLDTGELTEEEIL HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH DGLRVGTLRSTFTAVFCGSATANIGIAQLLDGICAYLPSPLDRTKAVGIDPKTEQVIERA CCHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHCCCCCHHCCCCCCCCHHHHHHHHC PSESEPLSALVFKTTSDPYTGKITIFRVYSGVLNSDSLVYNSTKEVQERIGQIYELEGKK CCCCCCCEEEEEEECCCCCCCCEEEEEEEHHHCCCCCEEECCHHHHHHHHHHHEECCCCC QHPIKQAVAGDIVAVAKLKETVTGDTLCDETKPIVYEPAQPLQPVISYAIEPKTKADEDK CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCHHHHHHHHHCCCCCCCCHHH IHSALQRMIEEDPTIESHRDPQTREFIISGMGQVHLEVIVEKMKRKFGADVLLKTPKVPY HHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEECCCCCH LETIRGSAKVQGKYKKQSGGRGQYGDCWIELSPLPRGEGYLFEDKIVGGVIPRQYIPAVD HHHHCCCCEECCCHHHCCCCCCCCCCEEEEECCCCCCCCEEECCCHHCCCCCHHHHHHHH KGIQEAAKEGFLAGNPVVDFKVALYDGSFHTVDSSEMAFKVAGSMAFKKAMEQCKPVLLE HHHHHHHHCCCCCCCCEEEEEEEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH PIVNMKITVPDENMGDVIGDLNSRRGKVVGVEPKANSQIIRSVVPMSEVLTYSNDLRSMT HHCCCEEECCCCCHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH SDRGMFTSEFSHYEEVPSHLAQKIIQEALDQKGNGNNHKSA HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure GRYETAKLRNLGIVAHGGAGKTSLAEAILFDTGMIDRLGRVDDGTSTMDYEPEEVKRRI CCCCCCHHHCCCEEEECCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHH SITSSLDHCEWHGCSIHLVDTPGYGNFIADTRACMRTLDCAVVILSAISGVKVQTEEVWQ HHHCCCCCCEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHH WANEFEIPRIAFVNKMDRERANFFRAIDDMEKALGARGVAVQIPLGSEENFEGVIDLVRM HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHH KAYRYQKDGSGKFSEGEIPADDLAEAQRLRDLMVETVAEAYDALTEKFLDTGELTEEEIL HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH DGLRVGTLRSTFTAVFCGSATANIGIAQLLDGICAYLPSPLDRTKAVGIDPKTEQVIERA CCHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHCCCCCHHCCCCCCCCHHHHHHHHC PSESEPLSALVFKTTSDPYTGKITIFRVYSGVLNSDSLVYNSTKEVQERIGQIYELEGKK CCCCCCCEEEEEEECCCCCCCCEEEEEEEHHHCCCCCEEECCHHHHHHHHHHHEECCCCC QHPIKQAVAGDIVAVAKLKETVTGDTLCDETKPIVYEPAQPLQPVISYAIEPKTKADEDK CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCHHHHHHHHHCCCCCCCCHHH IHSALQRMIEEDPTIESHRDPQTREFIISGMGQVHLEVIVEKMKRKFGADVLLKTPKVPY HHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEECCCCCH LETIRGSAKVQGKYKKQSGGRGQYGDCWIELSPLPRGEGYLFEDKIVGGVIPRQYIPAVD HHHHCCCCEECCCHHHCCCCCCCCCCEEEEECCCCCCCCEEECCCHHCCCCCHHHHHHHH KGIQEAAKEGFLAGNPVVDFKVALYDGSFHTVDSSEMAFKVAGSMAFKKAMEQCKPVLLE HHHHHHHHCCCCCCCCEEEEEEEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH PIVNMKITVPDENMGDVIGDLNSRRGKVVGVEPKANSQIIRSVVPMSEVLTYSNDLRSMT HHCCCEEECCCCCHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH SDRGMFTSEFSHYEEVPSHLAQKIIQEALDQKGNGNNHKSA HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP; H2O
Specific reaction: GTP + H2O = GDP + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA