Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197118681

Identifier: 197118681

GI number: 197118681

Start: 2671515

End: 2672411

Strand: Reverse

Name: 197118681

Synonym: Gbem_2300

Alternate gene names: NA

Gene position: 2672411-2671515 (Counterclockwise)

Preceding gene: 197118682

Following gene: 197118680

Centisome position: 57.91

GC content: 60.2

Gene sequence:

>897_bases
ATGTCCCCAAAACACTACGGCGCCTGGTTGATCGCCGCCTCCGCAGCAGGTTTTGCTACCCTCGGCATCCTCATCAAGAG
CGCCTTTTCCGGCGGCGCCAACATCACCACGGTACTTGCCGGGCGGTTCCTGGTAGCGTCGTTTTTTCTGTTCATCTATC
TCAGGGTGCGCAAGACCCCGCTTGTCATCGGGCGCAAATCCTCGCTGCAACTGCTGCTCATGGGAATGATCGGCTACGGC
GGCATGTCCATGCTCTACGCCAACGCCATCCACTACCTCCCAGCGTCCCTGACCGGGATGCTTCTTTACACCTACCCGGC
GCTCGTCACCGTCATCGCGCTGATCGTGGGTGAAGAGCGCTTCAACGCCGCCAAGGGTGTGGCGCTGGTGGTCTGCAGTG
CCGGTCTGGTGCTGCTATTGGGTGCCTCGTTCGATGGCGCGCGGCTGGAGGGAGTACTCTGCACTTTGGGGGCGGCCGGG
ATTTACAGTTGTTACATCATCATCGGCAACCGGATTCTAAAGGACATCGACCCGCTGGTCACCTCATTGTGGGTCTGTGC
CTCCGCAGGATTTACCTTTCTCTTCTATGGTGTCGCTACCGGCGGCCTCACCCTGGACCTCGCGCCCGTTGGGTGGCTTT
CCATCCTGGGGATCGCCCTGTTCCCAACGCTAATTGCGGTCGTCGGTTTCTTTGCCGGGCTACGCTACGTCGGCGCCACC
AACGCCTCCATCATCAGCATGCTTGAGCCGTTGATCACCGTGCTTTTATCGGCGCTTCTTCTGGGGGAGCGGATCACCGC
GCTGCAAGGTTTCGGCGGAGCGGTCCTTTTATTCGGCGGCCTTATCCTGCAGCTCTGGGGAAACGAAGCGCGTCGCGAGA
CGGTCATCGAAGTCTAA

Upstream 100 bases:

>100_bases
ACCGAGCACTGGTACGACCAGCTCTTCCTGGTCAGCCACGACGTGAGTTTCACCGAGATTACCGATCAGACCATCCAGCT
CGACTAGAGGAATTTGCTCC

Downstream 100 bases:

>100_bases
AGCCGTTACCTCGCCTTACCTTATAGGAGTAGGTTGCCCGGGCTCTCTCTCAGTGACGGAGGCGAATGAGTCCACCCTGC
GCACCATAGGTTATTCGAAG

Product: membrane protein

Products: NA

Alternate protein names: Transporter Of Drug/Metabolite Transporter Superfamily; Drug/Metabolite Transporter; Transmembrane Protein; Drug/Metabolite Transporter Protein; Drug/Metabolite Transporter Superfamily Permease

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MSPKHYGAWLIAASAAGFATLGILIKSAFSGGANITTVLAGRFLVASFFLFIYLRVRKTPLVIGRKSSLQLLLMGMIGYG
GMSMLYANAIHYLPASLTGMLLYTYPALVTVIALIVGEERFNAAKGVALVVCSAGLVLLLGASFDGARLEGVLCTLGAAG
IYSCYIIIGNRILKDIDPLVTSLWVCASAGFTFLFYGVATGGLTLDLAPVGWLSILGIALFPTLIAVVGFFAGLRYVGAT
NASIISMLEPLITVLLSALLLGERITALQGFGGAVLLFGGLILQLWGNEARRETVIEV

Sequences:

>Translated_298_residues
MSPKHYGAWLIAASAAGFATLGILIKSAFSGGANITTVLAGRFLVASFFLFIYLRVRKTPLVIGRKSSLQLLLMGMIGYG
GMSMLYANAIHYLPASLTGMLLYTYPALVTVIALIVGEERFNAAKGVALVVCSAGLVLLLGASFDGARLEGVLCTLGAAG
IYSCYIIIGNRILKDIDPLVTSLWVCASAGFTFLFYGVATGGLTLDLAPVGWLSILGIALFPTLIAVVGFFAGLRYVGAT
NASIISMLEPLITVLLSALLLGERITALQGFGGAVLLFGGLILQLWGNEARRETVIEV
>Mature_297_residues
SPKHYGAWLIAASAAGFATLGILIKSAFSGGANITTVLAGRFLVASFFLFIYLRVRKTPLVIGRKSSLQLLLMGMIGYGG
MSMLYANAIHYLPASLTGMLLYTYPALVTVIALIVGEERFNAAKGVALVVCSAGLVLLLGASFDGARLEGVLCTLGAAGI
YSCYIIIGNRILKDIDPLVTSLWVCASAGFTFLFYGVATGGLTLDLAPVGWLSILGIALFPTLIAVVGFFAGLRYVGATN
ASIISMLEPLITVLLSALLLGERITALQGFGGAVLLFGGLILQLWGNEARRETVIEV

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31294; Mature: 31163

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPKHYGAWLIAASAAGFATLGILIKSAFSGGANITTVLAGRFLVASFFLFIYLRVRKTP
CCCCHHHHEEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCE
LVIGRKSSLQLLLMGMIGYGGMSMLYANAIHYLPASLTGMLLYTYPALVTVIALIVGEER
EEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
FNAAKGVALVVCSAGLVLLLGASFDGARLEGVLCTLGAAGIYSCYIIIGNRILKDIDPLV
HHHHCCHHHHHHHHCHHEEEECCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
TSLWVCASAGFTFLFYGVATGGLTLDLAPVGWLSILGIALFPTLIAVVGFFAGLRYVGAT
HHHHHHHHCCHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NASIISMLEPLITVLLSALLLGERITALQGFGGAVLLFGGLILQLWGNEARRETVIEV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHCCC
>Mature Secondary Structure 
SPKHYGAWLIAASAAGFATLGILIKSAFSGGANITTVLAGRFLVASFFLFIYLRVRKTP
CCCHHHHEEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCE
LVIGRKSSLQLLLMGMIGYGGMSMLYANAIHYLPASLTGMLLYTYPALVTVIALIVGEER
EEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
FNAAKGVALVVCSAGLVLLLGASFDGARLEGVLCTLGAAGIYSCYIIIGNRILKDIDPLV
HHHHCCHHHHHHHHCHHEEEECCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
TSLWVCASAGFTFLFYGVATGGLTLDLAPVGWLSILGIALFPTLIAVVGFFAGLRYVGAT
HHHHHHHHCCHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NASIISMLEPLITVLLSALLLGERITALQGFGGAVLLFGGLILQLWGNEARRETVIEV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA