| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is ylaK [H]
Identifier: 197118671
GI number: 197118671
Start: 2659765
End: 2661087
Strand: Reverse
Name: ylaK [H]
Synonym: Gbem_2290
Alternate gene names: 197118671
Gene position: 2661087-2659765 (Counterclockwise)
Preceding gene: 197118672
Following gene: 197118670
Centisome position: 57.66
GC content: 62.36
Gene sequence:
>1323_bases GTGAAGAAAATCTACGTGCTGGACACCAACGTTCTTCTGTACGACCCGCAGGCTCTCACCAAGTTCGAGGACAACTCCAT CGTCGTGCCCATAACGGTGATCGAGGAGATTGACCGGTTCAAGAAGGACATGAACGAGACCGGCCGCAACGCCAGGCAGG TTTCCCGCCTCATGGACGCCTTCAGGAAGGAAGGGTCGCTCTCGCAGGGGCTCGCTCTGGAGAGCGGCGGTACGCTCAAG ATCGAGATCTACGAAGAGAAGGTGATGAAGAGGCTCCCGCCGGAGCTGCGCGAGGAGCGTGGCGACAACCGCATCCTGGC GGTCGCCGTCGACCTGATGGAATCCCAAAGCGAGATGCCGGTCATCCTGGTGACCAAGGACACCAACCTCCGCATCAAGG CCGACGCGCTCGGGCTCGATGCGCAGGACTACGAGTCGGACAAGGTGGCCATCGACGACCTGTTCGACGGTTTCGTGAGC CTGGAGGTCGGGGCCGAAGTGGTCGACCGCTTCTACAGCCAGGGTTGGCTGGACACCGAGCTGGAGCTGCAGCCTAACGA ATACGTCCTACTGGCCCAGGCGGGAAATCCCTCGCACAGCGCCATCGGCCGCTTCGACCGGGTTTCCCACCGCATCGTGC CGCTGGGGAAACTGGACAAGGAAGGGGTCTGGAGCGTATTCCCGAGGAACCTGGAGCAGTCCTTTGCGCTCGACGCTCTT TTGGACGACAACATCAAGATCGTGACGCTGGTGGGGAAGGCGGGTACCGGCAAGACCCTCCTCGCCATCGCCGCGGGGCT GCAGAAGACCGCGGAGGAGAACGTCTACAACCGGCTCCTGGTTTCGCGCCCGGTGTTCCCGATGGGGCGCGACCTGGGCT TTCTCCCCGGCGACATCGAGGAGAAGCTCACCCCCTGGATGCAGCCGATCTTCGACAACGTCGAGCTTCTTTTGAGCGGG CACGAGGGCGAGAAGCGCCAGCACAACAAGGGGTACAAGGAGCTGATGGCGATGGGGATCCTCGAGATCGAGCCGCTCAC CTACATCAGGGGGCGCTCGATTCCGAACCAGTACATGATCGTCGACGAGGCGCAGAACCTCACCCCGCACGAGATCAAGA CCATCGTGACCCGCGCCGGCGAGGGGACCAAGATCGTCCTCACCGGGGACCCGTACCAGATCGACAACCCGTACGTGGAC GCGGAAAGTAACGGCTTGACCTACGTGGTGGAGCGGCTCAAGGAGCAGGCCATCTCGGGTCACGTCACCATGACCAAAGG GGAGCGAAGCGAGCTCGCGGAGCTTGCCGCGAACCTGCTCTAA
Upstream 100 bases:
>100_bases GCAAGCCGGGAAGGGGATTGATCCTACGAAAAGCTCAAACTTAGCGGTTATTGATCGGGATAAACCGACTGTTCATCATG ATGCAGCGCAGGGGGGGGAT
Downstream 100 bases:
>100_bases CCCTACCGGCTCACACCGGCAACACCTCACATCAGGAGAACAAAGGGGGGGCACGTCCAGTGCCCTCTCTATTTTTTATG CTAGTTCTTGCTTTGGAATC
Product: PhoH-like ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 440; Mature: 440
Protein sequence:
>440_residues MKKIYVLDTNVLLYDPQALTKFEDNSIVVPITVIEEIDRFKKDMNETGRNARQVSRLMDAFRKEGSLSQGLALESGGTLK IEIYEEKVMKRLPPELREERGDNRILAVAVDLMESQSEMPVILVTKDTNLRIKADALGLDAQDYESDKVAIDDLFDGFVS LEVGAEVVDRFYSQGWLDTELELQPNEYVLLAQAGNPSHSAIGRFDRVSHRIVPLGKLDKEGVWSVFPRNLEQSFALDAL LDDNIKIVTLVGKAGTGKTLLAIAAGLQKTAEENVYNRLLVSRPVFPMGRDLGFLPGDIEEKLTPWMQPIFDNVELLLSG HEGEKRQHNKGYKELMAMGILEIEPLTYIRGRSIPNQYMIVDEAQNLTPHEIKTIVTRAGEGTKIVLTGDPYQIDNPYVD AESNGLTYVVERLKEQAISGHVTMTKGERSELAELAANLL
Sequences:
>Translated_440_residues MKKIYVLDTNVLLYDPQALTKFEDNSIVVPITVIEEIDRFKKDMNETGRNARQVSRLMDAFRKEGSLSQGLALESGGTLK IEIYEEKVMKRLPPELREERGDNRILAVAVDLMESQSEMPVILVTKDTNLRIKADALGLDAQDYESDKVAIDDLFDGFVS LEVGAEVVDRFYSQGWLDTELELQPNEYVLLAQAGNPSHSAIGRFDRVSHRIVPLGKLDKEGVWSVFPRNLEQSFALDAL LDDNIKIVTLVGKAGTGKTLLAIAAGLQKTAEENVYNRLLVSRPVFPMGRDLGFLPGDIEEKLTPWMQPIFDNVELLLSG HEGEKRQHNKGYKELMAMGILEIEPLTYIRGRSIPNQYMIVDEAQNLTPHEIKTIVTRAGEGTKIVLTGDPYQIDNPYVD AESNGLTYVVERLKEQAISGHVTMTKGERSELAELAANLL >Mature_440_residues MKKIYVLDTNVLLYDPQALTKFEDNSIVVPITVIEEIDRFKKDMNETGRNARQVSRLMDAFRKEGSLSQGLALESGGTLK IEIYEEKVMKRLPPELREERGDNRILAVAVDLMESQSEMPVILVTKDTNLRIKADALGLDAQDYESDKVAIDDLFDGFVS LEVGAEVVDRFYSQGWLDTELELQPNEYVLLAQAGNPSHSAIGRFDRVSHRIVPLGKLDKEGVWSVFPRNLEQSFALDAL LDDNIKIVTLVGKAGTGKTLLAIAAGLQKTAEENVYNRLLVSRPVFPMGRDLGFLPGDIEEKLTPWMQPIFDNVELLLSG HEGEKRQHNKGYKELMAMGILEIEPLTYIRGRSIPNQYMIVDEAQNLTPHEIKTIVTRAGEGTKIVLTGDPYQIDNPYVD AESNGLTYVVERLKEQAISGHVTMTKGERSELAELAANLL
Specific function: Unknown
COG id: COG1875
COG function: function code T; Predicted ATPase related to phosphate starvation-inducible protein PhoH
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PINc domain [H]
Homologues:
Organism=Escherichia coli, GI1787257, Length=218, Percent_Identity=33.0275229357798, Blast_Score=116, Evalue=2e-27, Organism=Escherichia coli, GI145693103, Length=194, Percent_Identity=36.5979381443299, Blast_Score=110, Evalue=3e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 - InterPro: IPR006596 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 49229; Mature: 49229
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIYVLDTNVLLYDPQALTKFEDNSIVVPITVIEEIDRFKKDMNETGRNARQVSRLMDA CCEEEEEECCEEEECCHHHHEECCCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH FRKEGSLSQGLALESGGTLKIEIYEEKVMKRLPPELREERGDNRILAVAVDLMESQSEMP HHHCCCCCCCEEECCCCEEEEEEEHHHHHHHCCHHHHHHCCCCEEEEEEEEHHHCCCCCC VILVTKDTNLRIKADALGLDAQDYESDKVAIDDLFDGFVSLEVGAEVVDRFYSQGWLDTE EEEEECCCCEEEEEEEECCCCCCCCCCCEEHHHHHCCCEEEHHHHHHHHHHHHCCCCCCE LELQPNEYVLLAQAGNPSHSAIGRFDRVSHRIVPLGKLDKEGVWSVFPRNLEQSFALDAL EEECCCCEEEEEECCCCCHHHHHHHHHHCCCEECCCCCCCCCCHHHCCCCHHHHHHHHHH LDDNIKIVTLVGKAGTGKTLLAIAAGLQKTAEENVYNRLLVSRPVFPMGRDLGFLPGDIE CCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH EKLTPWMQPIFDNVELLLSGHEGEKRQHNKGYKELMAMGILEIEPLTYIRGRSIPNQYMI HHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHCCEEECCEEEECCCCCCCCEEE VDEAQNLTPHEIKTIVTRAGEGTKIVLTGDPYQIDNPYVDAESNGLTYVVERLKEQAISG EECCCCCCHHHHHHHHHCCCCCCEEEEECCCEECCCCEECCCCCCHHHHHHHHHHHHHCC HVTMTKGERSELAELAANLL CEEEECCCHHHHHHHHHHCC >Mature Secondary Structure MKKIYVLDTNVLLYDPQALTKFEDNSIVVPITVIEEIDRFKKDMNETGRNARQVSRLMDA CCEEEEEECCEEEECCHHHHEECCCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH FRKEGSLSQGLALESGGTLKIEIYEEKVMKRLPPELREERGDNRILAVAVDLMESQSEMP HHHCCCCCCCEEECCCCEEEEEEEHHHHHHHCCHHHHHHCCCCEEEEEEEEHHHCCCCCC VILVTKDTNLRIKADALGLDAQDYESDKVAIDDLFDGFVSLEVGAEVVDRFYSQGWLDTE EEEEECCCCEEEEEEEECCCCCCCCCCCEEHHHHHCCCEEEHHHHHHHHHHHHCCCCCCE LELQPNEYVLLAQAGNPSHSAIGRFDRVSHRIVPLGKLDKEGVWSVFPRNLEQSFALDAL EEECCCCEEEEEECCCCCHHHHHHHHHHCCCEECCCCCCCCCCHHHCCCCHHHHHHHHHH LDDNIKIVTLVGKAGTGKTLLAIAAGLQKTAEENVYNRLLVSRPVFPMGRDLGFLPGDIE CCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH EKLTPWMQPIFDNVELLLSGHEGEKRQHNKGYKELMAMGILEIEPLTYIRGRSIPNQYMI HHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHCCEEECCEEEECCCCCCCCEEE VDEAQNLTPHEIKTIVTRAGEGTKIVLTGDPYQIDNPYVDAESNGLTYVVERLKEQAISG EECCCCCCHHHHHHHHHCCCCCCEEEEECCCEECCCCEECCCCCCHHHHHHHHHHHHHCC HVTMTKGERSELAELAANLL CEEEECCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]