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The map label for this gene is yfbG [C]

Identifier: 197118667

GI number: 197118667

Start: 2655342

End: 2656277

Strand: Reverse

Name: yfbG [C]

Synonym: Gbem_2286

Alternate gene names: 197118667

Gene position: 2656277-2655342 (Counterclockwise)

Preceding gene: 197118668

Following gene: 197118666

Centisome position: 57.56

GC content: 60.9

Gene sequence:

>936_bases
ATGCGCGTGCTAGTTACCGGCGGCGCCGGTTTTATCGGTTCACATCTATGCGAGAGGTTGTTGAGGGAGGGGCACGACGT
CATCTGCCTGGACAACTTCTTCACCGGCAGCAAGCTCAACATCGCGCATCTCCTCGACAACCGCAACTTCGAGCTGATCC
GCCACGACGTGACCCAGCCGATACTTTTGGAGGTGGACCGGATTTACAACCTCGCCTGCCCGGCGTCCCCGATCCACTAC
CAGTACAACCCGGTGAAGACCACGAAGACCAGCGTCATGGGGGCGATCAACATGCTGGGGATCGCCAAACGGGTGCGGGC
CCGCATCCTCCAGGCCTCGACCTCCGAGGTCTACGGCGATCCGCAGGTGCACCCGCAGACCGAGGCCTACTGGGGCAACG
TCAACACGCTCGGGGTGAGAAGTTGCTACGACGAGGGTAAGAGGGTTGCCGAGACGCTGATGATGGACTACCACCGCCAG
AACCACGTGGACATCCGCATCGTAAGGATCTTCAACACCTACGGTCCCAAGATGGCTGAAAACGACGGCAGGGTGGTCTC
CAACTTCATCCTGCAGGCGCTCAAGGGGGAGGACATCACCGTATACGGCGAAGGGGAACAGACCCGGTCTTTCTGCTTCG
TCTCCGACCTCGTGGAAGGTTTGATCAGGATGATGGAGTGCCCCGGGTTCATCGGCCCGGTCAACCTGGGAAACCCCACC
GAGACCACGATCGTCGAGTTCGCCAAGAAGATCATCGCGCTGACCGGCTCCAGTTCGCGCATCGTCTACCGGCCGCTTCC
CGCCGACGACCCGAAGCAGCGCCAGCCCGACATCTCGCTTGCGAAGCAGATGCTCGGCTGGGAGCCCAAGGTGCACGTGG
ACGAGGGGCTCAAGCAGACCATCGACTATTTCAGCTCGCGTCTCAATACGGCGTAA

Upstream 100 bases:

>100_bases
GTTGAACACCGAACCCGGTCACACCTCTTGAATCGCGACAATGCTGAAACGAACATATAACGTTGAACGTAGAACGTTGA
ACGGATACTGAGAGGTTTCA

Downstream 100 bases:

>100_bases
ACCATGCAGAAACGGCTATTTTTCGTACCGCTGGCGGTCATTATTTTCATCCTCTACTTCACGGTTTTCGGTGATCGCGG
ACTTTTGCGCATCAACCACC

Product: NAD-dependent nucleoside diphosphate-sugar epimerase/dehydratase

Products: NA

Alternate protein names: Galactowaldenase; UDP-galactose 4-epimerase [H]

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MRVLVTGGAGFIGSHLCERLLREGHDVICLDNFFTGSKLNIAHLLDNRNFELIRHDVTQPILLEVDRIYNLACPASPIHY
QYNPVKTTKTSVMGAINMLGIAKRVRARILQASTSEVYGDPQVHPQTEAYWGNVNTLGVRSCYDEGKRVAETLMMDYHRQ
NHVDIRIVRIFNTYGPKMAENDGRVVSNFILQALKGEDITVYGEGEQTRSFCFVSDLVEGLIRMMECPGFIGPVNLGNPT
ETTIVEFAKKIIALTGSSSRIVYRPLPADDPKQRQPDISLAKQMLGWEPKVHVDEGLKQTIDYFSSRLNTA

Sequences:

>Translated_311_residues
MRVLVTGGAGFIGSHLCERLLREGHDVICLDNFFTGSKLNIAHLLDNRNFELIRHDVTQPILLEVDRIYNLACPASPIHY
QYNPVKTTKTSVMGAINMLGIAKRVRARILQASTSEVYGDPQVHPQTEAYWGNVNTLGVRSCYDEGKRVAETLMMDYHRQ
NHVDIRIVRIFNTYGPKMAENDGRVVSNFILQALKGEDITVYGEGEQTRSFCFVSDLVEGLIRMMECPGFIGPVNLGNPT
ETTIVEFAKKIIALTGSSSRIVYRPLPADDPKQRQPDISLAKQMLGWEPKVHVDEGLKQTIDYFSSRLNTA
>Mature_311_residues
MRVLVTGGAGFIGSHLCERLLREGHDVICLDNFFTGSKLNIAHLLDNRNFELIRHDVTQPILLEVDRIYNLACPASPIHY
QYNPVKTTKTSVMGAINMLGIAKRVRARILQASTSEVYGDPQVHPQTEAYWGNVNTLGVRSCYDEGKRVAETLMMDYHRQ
NHVDIRIVRIFNTYGPKMAENDGRVVSNFILQALKGEDITVYGEGEQTRSFCFVSDLVEGLIRMMECPGFIGPVNLGNPT
ETTIVEFAKKIIALTGSSSRIVYRPLPADDPKQRQPDISLAKQMLGWEPKVHVDEGLKQTIDYFSSRLNTA

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family [H]

Homologues:

Organism=Homo sapiens, GI42516563, Length=307, Percent_Identity=60.2605863192182, Blast_Score=398, Evalue=1e-111,
Organism=Homo sapiens, GI7657641, Length=329, Percent_Identity=28.2674772036474, Blast_Score=107, Evalue=2e-23,
Organism=Escherichia coli, GI1788589, Length=341, Percent_Identity=28.7390029325513, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI1786974, Length=337, Percent_Identity=25.2225519287834, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI48994969, Length=341, Percent_Identity=25.2199413489736, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1788353, Length=338, Percent_Identity=23.3727810650888, Blast_Score=82, Evalue=6e-17,
Organism=Escherichia coli, GI1788365, Length=321, Percent_Identity=23.98753894081, Blast_Score=64, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17539532, Length=309, Percent_Identity=58.8996763754045, Blast_Score=395, Evalue=1e-110,
Organism=Caenorhabditis elegans, GI115532424, Length=325, Percent_Identity=27.3846153846154, Blast_Score=87, Evalue=8e-18,
Organism=Caenorhabditis elegans, GI17568069, Length=329, Percent_Identity=25.2279635258359, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI71982035, Length=333, Percent_Identity=24.024024024024, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI71982038, Length=335, Percent_Identity=23.8805970149254, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI21356223, Length=307, Percent_Identity=60.9120521172638, Blast_Score=400, Evalue=1e-112,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: =5.1.3.2 [H]

Molecular weight: Translated: 34914; Mature: 34914

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVLVTGGAGFIGSHLCERLLREGHDVICLDNFFTGSKLNIAHLLDNRNFELIRHDVTQP
CEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHCCCCHHHHHHHCCCH
ILLEVDRIYNLACPASPIHYQYNPVKTTKTSVMGAINMLGIAKRVRARILQASTSEVYGD
HHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PQVHPQTEAYWGNVNTLGVRSCYDEGKRVAETLMMDYHRQNHVDIRIVRIFNTYGPKMAE
CCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCC
NDGRVVSNFILQALKGEDITVYGEGEQTRSFCFVSDLVEGLIRMMECPGFIGPVNLGNPT
CCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
ETTIVEFAKKIIALTGSSSRIVYRPLPADDPKQRQPDISLAKQMLGWEPKVHVDEGLKQT
HHHHHHHHHHHHEECCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHH
IDYFSSRLNTA
HHHHHHHCCCC
>Mature Secondary Structure
MRVLVTGGAGFIGSHLCERLLREGHDVICLDNFFTGSKLNIAHLLDNRNFELIRHDVTQP
CEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHCCCCHHHHHHHCCCH
ILLEVDRIYNLACPASPIHYQYNPVKTTKTSVMGAINMLGIAKRVRARILQASTSEVYGD
HHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PQVHPQTEAYWGNVNTLGVRSCYDEGKRVAETLMMDYHRQNHVDIRIVRIFNTYGPKMAE
CCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCC
NDGRVVSNFILQALKGEDITVYGEGEQTRSFCFVSDLVEGLIRMMECPGFIGPVNLGNPT
CCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
ETTIVEFAKKIIALTGSSSRIVYRPLPADDPKQRQPDISLAKQMLGWEPKVHVDEGLKQT
HHHHHHHHHHHHEECCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHH
IDYFSSRLNTA
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]