| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is ackA [H]
Identifier: 197118658
GI number: 197118658
Start: 2647823
End: 2649088
Strand: Reverse
Name: ackA [H]
Synonym: Gbem_2277
Alternate gene names: 197118658
Gene position: 2649088-2647823 (Counterclockwise)
Preceding gene: 197118660
Following gene: 197118653
Centisome position: 57.4
GC content: 61.06
Gene sequence:
>1266_bases ATGGATATACTCGCACTTAACTGCGGAAGTTCTTCTGTAAAATACCAGTTGTTTGACTGGGACAAAAAAGTCGTGGTCGC CAAGGGTATGGTGGAGCGCGTCGTCATCGGCGATTCGTTCATCCTGCACGAAGTCCCGGGCCGCGAGACCTACCGCGAGG ATTCCGACTGTCCCGATCATAAGACCGCCGTCGATCTGATTCTGCGCACCCTGACCTCTCCCGGACACGGCGTGCTTACC GATATCAAACAGATAGCCGCGGTTGGGCACCGCGTGGTACACGGGGGGGAGCGTTTCACCAAGTCCGTGCTCATCGATGA TGACGTGCTGGCCGCGGTTACCGAGGTGCAGCATCTGGCGCCTTTGCACAACCCGCCCAATATCGCAGGCATCGAGGGGG CCATGGCCGTTCTTCCTGGCGTCCCCCAGGTGGCAATTTTCGATACCGCGTTTCACCAGACCATGCCCGAACACGCCTAT CTCTACCCGCTTCCCTACGAGTGGTACGAGAAGTACGGGGTCAGGCGGTACGGCTTCCACGGCACCTCGCATCTCTACGT CTCCAAGCGCATCGCCGCCATCCTCGGCAAACCTGCGAACCAGTGCAACGTCATCACCATGCATATCGGTAACGGCGTAT CGCACTGCGCCATCAAGAATGGGGTGTCCGTCGACACCAGCATGGGGCTCACCCCGCTGGAAGGCGCCATGATGGGTACC CGCTGCGGCGACATCGACCCGGCCATCCCCGCCTTCATGATGCAGAAGGAAAACCTCTCCGCCAAGGAGATCGACAGCAT CCTGAACAAGAAGAGCGGCGTCATCGGCATCACCGGCCGTTTCACCGACCGGCGTGACGTGATCGAGCACGCGAACGGGG GCGACAACCTCTGCCGACTCGCGCTCGACATCGAGGCTTACCGTCTCAAGAAGTACATCGGCACCTACATGGCCGTGGTG GGAAGGCTCGACGCGGTCGTCTTCACCGCCGGGGTGGGGGAGATGGGGGCTCCGATCAGGGAGCGCGCCATCGAGGGGCT CGACCACCTGGGCATCGTCCTCGACCGCGAGCGCAACGCCTCCGCCATGACCAGGAAGCGCGAGACGCTGATCACCACCG ACGACTCGCCGGTGAAGGTGTACGTGATACCGACAGACGAGGAGCTGGTCTTCACTGAAGACGTGGCGGCGATCCTGGAC GGGACCTACACGGACCACATGCACTTCGAGTACAGTTTCTCCAGGCCCGACTTCGTCAGGAAGTAA
Upstream 100 bases:
>100_bases TACGGTATATTTAAAAAACAGTTTTATTTGTAAACTTTTTTTGCCGGACTAAAGTACCCAGCTTGCCCGGTTAAACTACA ATGACGGGGGATGCAGATCG
Downstream 100 bases:
>100_bases GGCGCGGCAGAGCGTAAGGCAACAAAAAGGCCGGCGGGGTAACCCGCCGGCCTTTCTTTTTGTTCTTTGTGTAAGCGAGC CGCCGCCAGTGGTTGACAGG
Product: acetate kinase
Products: NA
Alternate protein names: Acetokinase [H]
Number of amino acids: Translated: 421; Mature: 421
Protein sequence:
>421_residues MDILALNCGSSSVKYQLFDWDKKVVVAKGMVERVVIGDSFILHEVPGRETYREDSDCPDHKTAVDLILRTLTSPGHGVLT DIKQIAAVGHRVVHGGERFTKSVLIDDDVLAAVTEVQHLAPLHNPPNIAGIEGAMAVLPGVPQVAIFDTAFHQTMPEHAY LYPLPYEWYEKYGVRRYGFHGTSHLYVSKRIAAILGKPANQCNVITMHIGNGVSHCAIKNGVSVDTSMGLTPLEGAMMGT RCGDIDPAIPAFMMQKENLSAKEIDSILNKKSGVIGITGRFTDRRDVIEHANGGDNLCRLALDIEAYRLKKYIGTYMAVV GRLDAVVFTAGVGEMGAPIRERAIEGLDHLGIVLDRERNASAMTRKRETLITTDDSPVKVYVIPTDEELVFTEDVAAILD GTYTDHMHFEYSFSRPDFVRK
Sequences:
>Translated_421_residues MDILALNCGSSSVKYQLFDWDKKVVVAKGMVERVVIGDSFILHEVPGRETYREDSDCPDHKTAVDLILRTLTSPGHGVLT DIKQIAAVGHRVVHGGERFTKSVLIDDDVLAAVTEVQHLAPLHNPPNIAGIEGAMAVLPGVPQVAIFDTAFHQTMPEHAY LYPLPYEWYEKYGVRRYGFHGTSHLYVSKRIAAILGKPANQCNVITMHIGNGVSHCAIKNGVSVDTSMGLTPLEGAMMGT RCGDIDPAIPAFMMQKENLSAKEIDSILNKKSGVIGITGRFTDRRDVIEHANGGDNLCRLALDIEAYRLKKYIGTYMAVV GRLDAVVFTAGVGEMGAPIRERAIEGLDHLGIVLDRERNASAMTRKRETLITTDDSPVKVYVIPTDEELVFTEDVAAILD GTYTDHMHFEYSFSRPDFVRK >Mature_421_residues MDILALNCGSSSVKYQLFDWDKKVVVAKGMVERVVIGDSFILHEVPGRETYREDSDCPDHKTAVDLILRTLTSPGHGVLT DIKQIAAVGHRVVHGGERFTKSVLIDDDVLAAVTEVQHLAPLHNPPNIAGIEGAMAVLPGVPQVAIFDTAFHQTMPEHAY LYPLPYEWYEKYGVRRYGFHGTSHLYVSKRIAAILGKPANQCNVITMHIGNGVSHCAIKNGVSVDTSMGLTPLEGAMMGT RCGDIDPAIPAFMMQKENLSAKEIDSILNKKSGVIGITGRFTDRRDVIEHANGGDNLCRLALDIEAYRLKKYIGTYMAVV GRLDAVVFTAGVGEMGAPIRERAIEGLDHLGIVLDRERNASAMTRKRETLITTDDSPVKVYVIPTDEELVFTEDVAAILD GTYTDHMHFEYSFSRPDFVRK
Specific function: Involved In The Activation Of Acetate To Acetyl CoA And The Secretion Of Acetate. During Anaerobic Growth Of The Organism, This Enzyme Is Also Involved In The Synthesis Of Most Of The ATP Formed Catabolically. [C]
COG id: COG0282
COG function: function code C; Acetate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acetokinase family [H]
Homologues:
Organism=Escherichia coli, GI1788633, Length=397, Percent_Identity=43.3249370277078, Blast_Score=314, Evalue=5e-87, Organism=Escherichia coli, GI145693184, Length=395, Percent_Identity=39.2405063291139, Blast_Score=292, Evalue=2e-80,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000890 - InterPro: IPR004372 [H]
Pfam domain/function: PF00871 Acetate_kinase [H]
EC number: =2.7.2.1 [H]
Molecular weight: Translated: 46364; Mature: 46364
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: PS01075 ACETATE_KINASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDILALNCGSSSVKYQLFDWDKKVVVAKGMVERVVIGDSFILHEVPGRETYREDSDCPDH CCEEEEECCCCCEEEEEECCCCEEEEECCHHHEEEECCCEEEECCCCCCCCCCCCCCCCH KTAVDLILRTLTSPGHGVLTDIKQIAAVGHRVVHGGERFTKSVLIDDDVLAAVTEVQHLA HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHEEEECCHHHHHHHHHHHHH PLHNPPNIAGIEGAMAVLPGVPQVAIFDTAFHQTMPEHAYLYPLPYEWYEKYGVRRYGFH CCCCCCCCCCCCCHHHHCCCCCCEEEEHHHHHHCCCCCEEEECCCHHHHHHCCCEEECCC GTSHLYVSKRIAAILGKPANQCNVITMHIGNGVSHCAIKNGVSVDTSMGLTPLEGAMMGT CCCEEHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCC RCGDIDPAIPAFMMQKENLSAKEIDSILNKKSGVIGITGRFTDRRDVIEHANGGDNLCRL CCCCCCCCCHHHHHHCCCCCHHHHHHHHCCCCCEEEEEECCCCHHHHHHHCCCCCCEEEE ALDIEAYRLKKYIGTYMAVVGRLDAVVFTAGVGEMGAPIRERAIEGLDHLGIVLDRERNA EEEHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHCHHHCCEEEECCCCC SAMTRKRETLITTDDSPVKVYVIPTDEELVFTEDVAAILDGTYTDHMHFEYSFSRPDFVR HHHHHCCCEEEECCCCCEEEEEEECCCCEEEHHHHHHHHCCCCCCCEEEEEECCCCCCCC K C >Mature Secondary Structure MDILALNCGSSSVKYQLFDWDKKVVVAKGMVERVVIGDSFILHEVPGRETYREDSDCPDH CCEEEEECCCCCEEEEEECCCCEEEEECCHHHEEEECCCEEEECCCCCCCCCCCCCCCCH KTAVDLILRTLTSPGHGVLTDIKQIAAVGHRVVHGGERFTKSVLIDDDVLAAVTEVQHLA HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHEEEECCHHHHHHHHHHHHH PLHNPPNIAGIEGAMAVLPGVPQVAIFDTAFHQTMPEHAYLYPLPYEWYEKYGVRRYGFH CCCCCCCCCCCCCHHHHCCCCCCEEEEHHHHHHCCCCCEEEECCCHHHHHHCCCEEECCC GTSHLYVSKRIAAILGKPANQCNVITMHIGNGVSHCAIKNGVSVDTSMGLTPLEGAMMGT CCCEEHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCC RCGDIDPAIPAFMMQKENLSAKEIDSILNKKSGVIGITGRFTDRRDVIEHANGGDNLCRL CCCCCCCCCHHHHHHCCCCCHHHHHHHHCCCCCEEEEEECCCCHHHHHHHCCCCCCEEEE ALDIEAYRLKKYIGTYMAVVGRLDAVVFTAGVGEMGAPIRERAIEGLDHLGIVLDRERNA EEEHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHCHHHCCEEEECCCCC SAMTRKRETLITTDDSPVKVYVIPTDEELVFTEDVAAILDGTYTDHMHFEYSFSRPDFVR HHHHHCCCEEEECCCCCEEEEEEECCCCEEEHHHHHHHHCCCCCCCEEEEEECCCCCCCC K C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA