| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197118580
Identifier: 197118580
GI number: 197118580
Start: 2558718
End: 2558975
Strand: Reverse
Name: 197118580
Synonym: Gbem_2199
Alternate gene names: NA
Gene position: 2558975-2558718 (Counterclockwise)
Preceding gene: 197118581
Following gene: 197118579
Centisome position: 55.45
GC content: 58.14
Gene sequence:
>258_bases ATGTCTGGATTGCGCTATGAGCATGTACATCCGATCAAGTTCACAGCCGTCGGCGCCAGAACTATCGGTGACCTGATCCA GAACTTCGAAGAGAACCTTGCGTTGTTCAAGCGCTGGGACGAGAAGGGGATCAAGCTGGACCCGCACGGCGTGGGGAGCA GTTACGCCATCTTCTACACCTACGACGAGCAGGTGGCGCGTGAAGAGGGATTCGAACGGATCCGCACCGAATCGGGGAAT CCCTTGCCGCGCCGCTGA
Upstream 100 bases:
>100_bases CACTATTCCACAAAGAACCCTTCTTTTGACAAAAGGTTTGCCTCCCGCTTAAATCCCCGTTACAATTAGCTACCTTTAAT ATTGATGAAGGGAGGTAGCT
Downstream 100 bases:
>100_bases GCCGGGCGTCCCTTTATAATGAAAGTTTCGCTTCCAACTTTCGACCCACCTATGCGATACTTTGCCAGTCGCGTGGCCCA CAGCCGGGGGCCGTCGGATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 85; Mature: 84
Protein sequence:
>85_residues MSGLRYEHVHPIKFTAVGARTIGDLIQNFEENLALFKRWDEKGIKLDPHGVGSSYAIFYTYDEQVAREEGFERIRTESGN PLPRR
Sequences:
>Translated_85_residues MSGLRYEHVHPIKFTAVGARTIGDLIQNFEENLALFKRWDEKGIKLDPHGVGSSYAIFYTYDEQVAREEGFERIRTESGN PLPRR >Mature_84_residues SGLRYEHVHPIKFTAVGARTIGDLIQNFEENLALFKRWDEKGIKLDPHGVGSSYAIFYTYDEQVAREEGFERIRTESGNP LPRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9826; Mature: 9695
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGLRYEHVHPIKFTAVGARTIGDLIQNFEENLALFKRWDEKGIKLDPHGVGSSYAIFYT CCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCEEEEEE YDEQVAREEGFERIRTESGNPLPRR CCHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SGLRYEHVHPIKFTAVGARTIGDLIQNFEENLALFKRWDEKGIKLDPHGVGSSYAIFYT CCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCEEEEEE YDEQVAREEGFERIRTESGNPLPRR CCHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA