Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197118535

Identifier: 197118535

GI number: 197118535

Start: 2507408

End: 2508253

Strand: Direct

Name: 197118535

Synonym: Gbem_2154

Alternate gene names: NA

Gene position: 2507408-2508253 (Clockwise)

Preceding gene: 197118532

Following gene: 197118536

Centisome position: 54.33

GC content: 57.68

Gene sequence:

>846_bases
ATGTGCTCAAAGCTGCATACCTGCTGTATCGCTTTCGCAATCCTTCTATTGCTTGCCTTGCCTGCACTGTCAGCAGAGCC
AGCGAAAAGAAGCTATACATTGGCAGTTGTCCCCAATCAGCCTGCCATAACACTGCACAAGAACTGGACCCCTTTCGTGC
AGTACCTCTCCAAGCAACTGGGCGTGGAAATCGAGTTGAAGCTTTACGACAAGATCGACGTCTTTCTGTCGGAGACGCAG
AAAGGCGCGGCGGATCTCATTTATTCCGCACCGAACATGTTCTATCTCGCCTACCAGAAGCAGAAATACGTTCCGCTGGT
GCGCAGCTCCCATCCGTTGCAGGGGCAGGTCTTCGTGAGAAAGGACTCCCCCTACCTCAAGGTGAGCGATCTCAAGGGTA
AGACGATCGCTTCCGTCGGGCCCAGATCCATCTGCAGCGTCATCACCCGCCACGCGCTGCTCACCGGCCAGGGCGCCATC
GACTACAACTCGACCTTCAGTGGATCGACCATCAACGTGGCCAAGAGCGTCCTATTGGGGAAGGTCGACGCCGGCGTCAC
CCTTGACACCAGCGTCATCAACGACGCCCCCGAAATGCTCAGCGAGTTCCGCGTCATCCTGCGGACGGAGAAGATAGCGC
CGCACCCTTTGGCGGCCCACCCCCGCGTCCCCAAAAAGCTCCAGGATGCCGTGACCAGGGCGGTGCTAGCCCTGGACCAG
TCGGAGGAAGGGCGCAGGATGCTGAAGGACGTGAAGCTTGTGGACCCGATAAAGGCGAACTTCAAGCGGGATTACAGCTT
CTTTGCCAAGGTCGATCTTGAGGGACCTCGGCAACAGGCGAAGTAG

Upstream 100 bases:

>100_bases
GTGATTTCTGTGGTATTTAAGTAAGGTGGAAAATATTCGGAAGGCTTATTTACTGTATCAGCAATTGCCGACGATGGTAT
CAATGGTTCTGGAGGGGTCC

Downstream 100 bases:

>100_bases
CCCAGCCAGATGACGAGCCGCCTCGAAGTAAAGATCATCGTCTCCCTCGCCCTCATCCTCACCTTGCTCATCGCCGTTTA
CGGCTGGTGGATCGGTAGCC

Product: ABC transporter substrate-binding protein

Products: NA

Alternate protein names: Phosphate/Phosphonate ABC Transporter Periplasmic Protein; ABC Transport System Periplasmic Component; Phosphonate ABC Transporter

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MCSKLHTCCIAFAILLLLALPALSAEPAKRSYTLAVVPNQPAITLHKNWTPFVQYLSKQLGVEIELKLYDKIDVFLSETQ
KGAADLIYSAPNMFYLAYQKQKYVPLVRSSHPLQGQVFVRKDSPYLKVSDLKGKTIASVGPRSICSVITRHALLTGQGAI
DYNSTFSGSTINVAKSVLLGKVDAGVTLDTSVINDAPEMLSEFRVILRTEKIAPHPLAAHPRVPKKLQDAVTRAVLALDQ
SEEGRRMLKDVKLVDPIKANFKRDYSFFAKVDLEGPRQQAK

Sequences:

>Translated_281_residues
MCSKLHTCCIAFAILLLLALPALSAEPAKRSYTLAVVPNQPAITLHKNWTPFVQYLSKQLGVEIELKLYDKIDVFLSETQ
KGAADLIYSAPNMFYLAYQKQKYVPLVRSSHPLQGQVFVRKDSPYLKVSDLKGKTIASVGPRSICSVITRHALLTGQGAI
DYNSTFSGSTINVAKSVLLGKVDAGVTLDTSVINDAPEMLSEFRVILRTEKIAPHPLAAHPRVPKKLQDAVTRAVLALDQ
SEEGRRMLKDVKLVDPIKANFKRDYSFFAKVDLEGPRQQAK
>Mature_281_residues
MCSKLHTCCIAFAILLLLALPALSAEPAKRSYTLAVVPNQPAITLHKNWTPFVQYLSKQLGVEIELKLYDKIDVFLSETQ
KGAADLIYSAPNMFYLAYQKQKYVPLVRSSHPLQGQVFVRKDSPYLKVSDLKGKTIASVGPRSICSVITRHALLTGQGAI
DYNSTFSGSTINVAKSVLLGKVDAGVTLDTSVINDAPEMLSEFRVILRTEKIAPHPLAAHPRVPKKLQDAVTRAVLALDQ
SEEGRRMLKDVKLVDPIKANFKRDYSFFAKVDLEGPRQQAK

Specific function: Unknown

COG id: COG3221

COG function: function code P; ABC-type phosphate/phosphonate transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31080; Mature: 31080

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCSKLHTCCIAFAILLLLALPALSAEPAKRSYTLAVVPNQPAITLHKNWTPFVQYLSKQL
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHH
GVEIELKLYDKIDVFLSETQKGAADLIYSAPNMFYLAYQKQKYVPLVRSSHPLQGQVFVR
CCEEEEEEECHHHHHHHHCCCCHHHHEECCCCEEEEEEECCCCCCHHCCCCCCCCEEEEE
KDSPYLKVSDLKGKTIASVGPRSICSVITRHALLTGQGAIDYNSTFSGSTINVAKSVLLG
CCCCEEEEECCCCCEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
KVDAGVTLDTSVINDAPEMLSEFRVILRTEKIAPHPLAAHPRVPKKLQDAVTRAVLALDQ
CCCCCCEEEHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
SEEGRRMLKDVKLVDPIKANFKRDYSFFAKVDLEGPRQQAK
CHHHHHHHHHHHHCCHHHHHHCCCCEEEEEEECCCCHHCCC
>Mature Secondary Structure
MCSKLHTCCIAFAILLLLALPALSAEPAKRSYTLAVVPNQPAITLHKNWTPFVQYLSKQL
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHH
GVEIELKLYDKIDVFLSETQKGAADLIYSAPNMFYLAYQKQKYVPLVRSSHPLQGQVFVR
CCEEEEEEECHHHHHHHHCCCCHHHHEECCCCEEEEEEECCCCCCHHCCCCCCCCEEEEE
KDSPYLKVSDLKGKTIASVGPRSICSVITRHALLTGQGAIDYNSTFSGSTINVAKSVLLG
CCCCEEEEECCCCCEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
KVDAGVTLDTSVINDAPEMLSEFRVILRTEKIAPHPLAAHPRVPKKLQDAVTRAVLALDQ
CCCCCCEEEHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
SEEGRRMLKDVKLVDPIKANFKRDYSFFAKVDLEGPRQQAK
CHHHHHHHHHHHHCCHHHHHHCCCCEEEEEEECCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA