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The map label for this gene is etfB-6 [H]

Identifier: 197118467

GI number: 197118467

Start: 2410112

End: 2410924

Strand: Direct

Name: etfB-6 [H]

Synonym: Gbem_2085

Alternate gene names: 197118467

Gene position: 2410112-2410924 (Clockwise)

Preceding gene: 197118466

Following gene: 197118468

Centisome position: 52.22

GC content: 62.61

Gene sequence:

>813_bases
ATGCTGGTAATTGCCTGCCTGAAGCAGGTCCCGGATACGACGCAGGTGCAGATCGATCCCGTCACCAACACCCTGGTGAG
GGACGGGATCCCGTTCATCGTCAACCCTTACGACACCCATGCGCTGGAGGAGACCCTGCGTCTCAAGTACAGCCACGGGT
TGAAGAGCGTGGCGCTTTCCATGGGCCCCCCCAACGCCGAGGCGACGCTGAGAAAGGCGCTGGCTCTGGGCGTTGATCGG
AGCATCCTCCTTTCGGATCGAGCCTACGGCGGCGCGGACACTCTGTCGACCAGCAACGTACTTGCTGCGGCAATACGGAA
ACTGGGCGAGAGCGAGGAAGTAGGCCTCGTGTTCTGCGGCAAGCAGACTATCGACGGCGACACGGCGCAGGTAGGCCCGG
GGATAGCGGTCCGGTTGGGATTCTCCCAGTTGACCCTGGTGGATCGTATCGAGAAACTCGACCTCGACGCCAAAACGATA
ACGGTGCGTCGCAAGCTGGAGGGACGATACGAGATCGTCGAGGCGCGGTTGCCTGCGATGATCACGGTGGTCCGGGAACT
GAACCGCCCGCGTTACCCAACGGTGCCGATGCGGCTGGCATCCGCCAAGGCCGAGGTGGAGTCTTGGAGCAACGAGCAGT
TGCAGTTGGACGTGAACAGCGTCGGGCTCAAGGGGTCCCCTACCTGGGTAAGCCGCATCTTCTCGCCTGAGCGGCAGGAA
GGAGAGATCATCGGCGACGGCATGAACGATCCCGTAGCCGCGGCCCGTCTGCTGCTCGATCGCCTGGTCCAGGGGGACAT
GCTCTCCGTATAG

Upstream 100 bases:

>100_bases
GAAGGCTTGGGTGAGGAGTGGGAACGTAGCTCAAGGGCAGTCAAAAGACGGTGCCCGCCTGAGGTCGGCGGTGAGTTTAT
AAGAGACAAGGAGGCCAGAC

Downstream 100 bases:

>100_bases
GTCCCCTGACTGAAAACAAAAGGGGACAGGCTACTTTTTCGAAAAATAAAAGTAGCCTGTCCCCTTTACGAAGCGAAAGC
GCTCCATCCCCCAGCGGGGG

Product: electron transfer flavoprotein subunit beta

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MLVIACLKQVPDTTQVQIDPVTNTLVRDGIPFIVNPYDTHALEETLRLKYSHGLKSVALSMGPPNAEATLRKALALGVDR
SILLSDRAYGGADTLSTSNVLAAAIRKLGESEEVGLVFCGKQTIDGDTAQVGPGIAVRLGFSQLTLVDRIEKLDLDAKTI
TVRRKLEGRYEIVEARLPAMITVVRELNRPRYPTVPMRLASAKAEVESWSNEQLQLDVNSVGLKGSPTWVSRIFSPERQE
GEIIGDGMNDPVAAARLLLDRLVQGDMLSV

Sequences:

>Translated_270_residues
MLVIACLKQVPDTTQVQIDPVTNTLVRDGIPFIVNPYDTHALEETLRLKYSHGLKSVALSMGPPNAEATLRKALALGVDR
SILLSDRAYGGADTLSTSNVLAAAIRKLGESEEVGLVFCGKQTIDGDTAQVGPGIAVRLGFSQLTLVDRIEKLDLDAKTI
TVRRKLEGRYEIVEARLPAMITVVRELNRPRYPTVPMRLASAKAEVESWSNEQLQLDVNSVGLKGSPTWVSRIFSPERQE
GEIIGDGMNDPVAAARLLLDRLVQGDMLSV
>Mature_270_residues
MLVIACLKQVPDTTQVQIDPVTNTLVRDGIPFIVNPYDTHALEETLRLKYSHGLKSVALSMGPPNAEATLRKALALGVDR
SILLSDRAYGGADTLSTSNVLAAAIRKLGESEEVGLVFCGKQTIDGDTAQVGPGIAVRLGFSQLTLVDRIEKLDLDAKTI
TVRRKLEGRYEIVEARLPAMITVVRELNRPRYPTVPMRLASAKAEVESWSNEQLQLDVNSVGLKGSPTWVSRIFSPERQE
GEIIGDGMNDPVAAARLLLDRLVQGDMLSV

Specific function: May play a role in a redox process involved in nitrogen fixation [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=220, Percent_Identity=34.0909090909091, Blast_Score=105, Evalue=3e-23,
Organism=Homo sapiens, GI62420877, Length=207, Percent_Identity=34.7826086956522, Blast_Score=105, Evalue=3e-23,
Organism=Escherichia coli, GI87081682, Length=266, Percent_Identity=29.6992481203008, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI2367123, Length=210, Percent_Identity=27.1428571428571, Blast_Score=67, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI25141345, Length=223, Percent_Identity=29.1479820627803, Blast_Score=101, Evalue=3e-22,
Organism=Saccharomyces cerevisiae, GI6321646, Length=200, Percent_Identity=34, Blast_Score=92, Evalue=7e-20,
Organism=Drosophila melanogaster, GI24651147, Length=198, Percent_Identity=33.3333333333333, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24651145, Length=198, Percent_Identity=33.3333333333333, Blast_Score=97, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 29399; Mature: 29399

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVIACLKQVPDTTQVQIDPVTNTLVRDGIPFIVNPYDTHALEETLRLKYSHGLKSVALS
CEEEEEHHHCCCCCEEEECCCHHHHHHCCCCEEECCCHHHHHHHHHHHHHHCCHHHEEEE
MGPPNAEATLRKALALGVDRSILLSDRAYGGADTLSTSNVLAAAIRKLGESEEVGLVFCG
CCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEC
KQTIDGDTAQVGPGIAVRLGFSQLTLVDRIEKLDLDAKTITVRRKLEGRYEIVEARLPAM
CCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCHHEEEEEHHHCCHHHHHHHHHHHH
ITVVRELNRPRYPTVPMRLASAKAEVESWSNEQLQLDVNSVGLKGSPTWVSRIFSPERQE
HHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHCCCCCCC
GEIIGDGMNDPVAAARLLLDRLVQGDMLSV
CCEECCCCCCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLVIACLKQVPDTTQVQIDPVTNTLVRDGIPFIVNPYDTHALEETLRLKYSHGLKSVALS
CEEEEEHHHCCCCCEEEECCCHHHHHHCCCCEEECCCHHHHHHHHHHHHHHCCHHHEEEE
MGPPNAEATLRKALALGVDRSILLSDRAYGGADTLSTSNVLAAAIRKLGESEEVGLVFCG
CCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEC
KQTIDGDTAQVGPGIAVRLGFSQLTLVDRIEKLDLDAKTITVRRKLEGRYEIVEARLPAM
CCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCHHEEEEEHHHCCHHHHHHHHHHHH
ITVVRELNRPRYPTVPMRLASAKAEVESWSNEQLQLDVNSVGLKGSPTWVSRIFSPERQE
HHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHCCCCCCC
GEIIGDGMNDPVAAARLLLDRLVQGDMLSV
CCEECCCCCCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA