| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is nifEN [H]
Identifier: 197118459
GI number: 197118459
Start: 2401616
End: 2404372
Strand: Direct
Name: nifEN [H]
Synonym: Gbem_2077
Alternate gene names: 197118459
Gene position: 2401616-2404372 (Clockwise)
Preceding gene: 197118458
Following gene: 197118460
Centisome position: 52.04
GC content: 62.86
Gene sequence:
>2757_bases ATGGCGAAGCCAGACTGGTACGACACAACTGATTGCGACACTCACGATGCCGGGGCTCCTAAGTTCTGCAAGAAGTCGGA ACCGGGCGAGGGGACGGAACGAAGCTGCGCCTACGACGGCGCCCGCGTGGTTCTCATGCCCATCACCGACGTCATCCACC TGGTGCACGGCCCCATCGCCTGCGCCGGAAACTCCTGGGACAACCGCGGGGCACGCTCCTCGGATTCCCAGATCTACCGC CGCGGCTTCACCACGGAGATGCTGCAAAACGACGTGATCTTCGGCGGCGAAAAGAAGCTCTACCGCGCCATCCAGGAACT GGCGGCGCGCTACCCGGAGGCAAAGGCGATCTTCGTCTACGCCACCTGCGTTACCTCCATGACCGGCGACGACATCGAGG CGGTCTGCAAAGCGGCCCAGGAGAAGGTGAGCGTCCCGGTGATCCCGGTGAATACGCCTGGCTTCATCGGCGACAAGAAC ATCGGCAACCGCCTGGCCGGCGAGACCCTCTTCAAGTACGTAATTGGCACCGCGGAACCGGAATTCACCACGGATTACGA CATAAACCTGATCGGCGAGTACAACATCGCCGGCGACCTCTGGGGGATGCTGCCGCTCTTCGACCGGCTCGGGATCCGCG TCCTCTCCTGCATCAGCGGCGACGCCAAGTTCGAGGAGCTGCGCTACGCGCACCGCGCCAAGCTGAACATCATCGTCTGC TCCAAGAGCCTCACCAACCTCGCCAAGAAGATGCAGAAGGTGTACGGCATCCCGTACCTGGAGGAATCCTTCTACGGCAT GACGGATGTGGCGAAGGCGCTGCGGGACATAGCGCGGGAGCTGGACGACCTGGTGAACGGCCTGGAGAAGCGGGTGATGC AGGACCGGGTGGAAAAGCTGGTCGCCGAGTGCGAGGAGAGCTGCCGCGCCGAGCTTGCTCCTTATCGGGAGAGGCTGGCC GGGAAGAAGGCGGTGCTCTTCACCGGGGGGGTGAAGACCTGGTCCATGGTGAACGCGCTGGCGGAGCTGGGGGTGGAGAT TCTCGCAGCGGGAACGCAGAATTCGACGCTGGAGGATTTCTACCGCATGAAGGCGCTGATGCACGAGGATGCCTCCATCA TCGCGGACACCAGTACGGCGGGGCTTCTTTCGGTCATGTACGAAAAGCTCCCCGACCTGATCGTCGCGGGGGGGAAGACC AAGTTCCTGGCGCTGAAGACGAAGACCCCGTTTCTGGACATAAACCACGGGCGCTCCCATCCTTACGCGGGTTACGCCGG AATGGTCACCTTCGCCAAACAGCTTGATCTCACGGTGAATAACCCGATCTGGCCGACCCTGAACGACAAGGCCCCCTGGG AGAAGGACGCCGAGGCGCAGAAAGCGGATCTGGCCTACGCCGCCGGGCATGCCGCGCGCTTCGCCGCCGAAGAGATCAAG GCCTCGCGGGTCAAGGTGCCGACCAAGAACGCCACGGTAAACCCGCAGAAGAACTCCCCCGCGCTGGGGGCGACGCTCGC CTATCTCGGGATCGACCGGATGCTGGGGCTTTTGCACGGCGCCCAGGGATGCTCCACCTTCATCAGGCTGCAGCTCTCCC GGCATTTCAAGGAATCCATCGCGCTCAACTCGACCAGCATGAGCGAGGAGACGGCCATCTTCGGCGGCTGGGACAACCTG AGGGTCGGCCTGAACCGGGTCATGGAAAAGTTCAAGCCAGAGGTGGTGGGCGTGATGACCACCGGTTTGACCGAGACCAT GGGGGACGACGTCAGGAGCGCCATCGTCAAGTTCCGGGAGGCGCATCCGGAGCACGATGCCATTCCCGTGATCCACGCCT CGACCCCGGATTACTGCGGCTCGATGCAGGAAGGGTACGCCGCGGCGGTCGAGGCCATCGTGGCGACGGTGCCGGAAGGG GGCATCGGAATACCTGGACAGGTAAGTATTCTGCCGGGTTGCCAGCTAACTCCTGCCGAGGTCGAGGAAATCGCGGGAAT CTGCGAGGCGTTCGGGCTGGATCCGGTGGTTGTGCCGGACATCTCCAACGCGCTGGATGGGCACATCGACGCCACCGTCT CGGCGCTCTCCGTAGGGGGAGCCACCATCGAGCGCATCAAGGCGGCGGGGCGGAGCGAAGCGACGCTATATTTCGGCGAT TCGCTGGCCGAAGCAGCCGGGGTGCTCCAGGACAAGTTCGGCATCCCGAGTTACGGGTTCACCTCCATCACCGGGCTCAA GGAGACGGACCTATTGATGGCCACGCTCTCGGCTCTTTCCGGACGGCCGATACCTGTGAAATTCCGGCGCTGGAGAAGCC GCCTCATGGACGCCATGGTGGACAGCCACTACCAGTTCGGACAGAAAAAAGTGGCGCTGGCGCTGGAGGCGGACCACCTG AAGGGGATGACACATTTCCTTGCCAGCCTCGGCTGCGAAATACAGGTCGCCATTGCTGCAACGAGGACGCGGGGCTTGGA CCGCTTGCCGACGGAGAACGTATTCGTCGGGGACCTGGAGGACCTGGAACAGACCGCGGCGGGAGCCGACCTGTTAGTGG CCAACTCCAACGGGCGCCAAGCGGCGAAGAAACTAGGGATCAATGCACACCTGAGAACCGGGATGCCCGTTTTCGACCGG CTCGGGGCGCACCAAAAGATGTGGGTCGGCTACCAGGGGACGCTGAACCTGGTCTTCGAGGTCGCAAATATATTCCAAGC CAATGCCAAGGAAGCGCAGAAACTGGCGCACAACTGA
Upstream 100 bases:
>100_bases CAAGGAGAGAAGCACAAGAAGGTTTAAAACTTAAGTCTTTGTCTTTTCACAGAAGTCCTCAGATGTTCTCCTTGCTAATG GTTTTAAAAAGGAGGCTCCA
Downstream 100 bases:
>100_bases GAGGCAGAGAAGAGGCAGATTGAGATTAAGATTTAGATAAAGGCTAAAACCTTGGCTACAGAATCTTCTTTATCTCTATC TTTATCTTTATCTCGCTTTT
Product: bifunctional nitrogenase molybdenum-cofactor biosynthesis protein NifE/NifN
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 918; Mature: 917
Protein sequence:
>918_residues MAKPDWYDTTDCDTHDAGAPKFCKKSEPGEGTERSCAYDGARVVLMPITDVIHLVHGPIACAGNSWDNRGARSSDSQIYR RGFTTEMLQNDVIFGGEKKLYRAIQELAARYPEAKAIFVYATCVTSMTGDDIEAVCKAAQEKVSVPVIPVNTPGFIGDKN IGNRLAGETLFKYVIGTAEPEFTTDYDINLIGEYNIAGDLWGMLPLFDRLGIRVLSCISGDAKFEELRYAHRAKLNIIVC SKSLTNLAKKMQKVYGIPYLEESFYGMTDVAKALRDIARELDDLVNGLEKRVMQDRVEKLVAECEESCRAELAPYRERLA GKKAVLFTGGVKTWSMVNALAELGVEILAAGTQNSTLEDFYRMKALMHEDASIIADTSTAGLLSVMYEKLPDLIVAGGKT KFLALKTKTPFLDINHGRSHPYAGYAGMVTFAKQLDLTVNNPIWPTLNDKAPWEKDAEAQKADLAYAAGHAARFAAEEIK ASRVKVPTKNATVNPQKNSPALGATLAYLGIDRMLGLLHGAQGCSTFIRLQLSRHFKESIALNSTSMSEETAIFGGWDNL RVGLNRVMEKFKPEVVGVMTTGLTETMGDDVRSAIVKFREAHPEHDAIPVIHASTPDYCGSMQEGYAAAVEAIVATVPEG GIGIPGQVSILPGCQLTPAEVEEIAGICEAFGLDPVVVPDISNALDGHIDATVSALSVGGATIERIKAAGRSEATLYFGD SLAEAAGVLQDKFGIPSYGFTSITGLKETDLLMATLSALSGRPIPVKFRRWRSRLMDAMVDSHYQFGQKKVALALEADHL KGMTHFLASLGCEIQVAIAATRTRGLDRLPTENVFVGDLEDLEQTAAGADLLVANSNGRQAAKKLGINAHLRTGMPVFDR LGAHQKMWVGYQGTLNLVFEVANIFQANAKEAQKLAHN
Sequences:
>Translated_918_residues MAKPDWYDTTDCDTHDAGAPKFCKKSEPGEGTERSCAYDGARVVLMPITDVIHLVHGPIACAGNSWDNRGARSSDSQIYR RGFTTEMLQNDVIFGGEKKLYRAIQELAARYPEAKAIFVYATCVTSMTGDDIEAVCKAAQEKVSVPVIPVNTPGFIGDKN IGNRLAGETLFKYVIGTAEPEFTTDYDINLIGEYNIAGDLWGMLPLFDRLGIRVLSCISGDAKFEELRYAHRAKLNIIVC SKSLTNLAKKMQKVYGIPYLEESFYGMTDVAKALRDIARELDDLVNGLEKRVMQDRVEKLVAECEESCRAELAPYRERLA GKKAVLFTGGVKTWSMVNALAELGVEILAAGTQNSTLEDFYRMKALMHEDASIIADTSTAGLLSVMYEKLPDLIVAGGKT KFLALKTKTPFLDINHGRSHPYAGYAGMVTFAKQLDLTVNNPIWPTLNDKAPWEKDAEAQKADLAYAAGHAARFAAEEIK ASRVKVPTKNATVNPQKNSPALGATLAYLGIDRMLGLLHGAQGCSTFIRLQLSRHFKESIALNSTSMSEETAIFGGWDNL RVGLNRVMEKFKPEVVGVMTTGLTETMGDDVRSAIVKFREAHPEHDAIPVIHASTPDYCGSMQEGYAAAVEAIVATVPEG GIGIPGQVSILPGCQLTPAEVEEIAGICEAFGLDPVVVPDISNALDGHIDATVSALSVGGATIERIKAAGRSEATLYFGD SLAEAAGVLQDKFGIPSYGFTSITGLKETDLLMATLSALSGRPIPVKFRRWRSRLMDAMVDSHYQFGQKKVALALEADHL KGMTHFLASLGCEIQVAIAATRTRGLDRLPTENVFVGDLEDLEQTAAGADLLVANSNGRQAAKKLGINAHLRTGMPVFDR LGAHQKMWVGYQGTLNLVFEVANIFQANAKEAQKLAHN >Mature_917_residues AKPDWYDTTDCDTHDAGAPKFCKKSEPGEGTERSCAYDGARVVLMPITDVIHLVHGPIACAGNSWDNRGARSSDSQIYRR GFTTEMLQNDVIFGGEKKLYRAIQELAARYPEAKAIFVYATCVTSMTGDDIEAVCKAAQEKVSVPVIPVNTPGFIGDKNI GNRLAGETLFKYVIGTAEPEFTTDYDINLIGEYNIAGDLWGMLPLFDRLGIRVLSCISGDAKFEELRYAHRAKLNIIVCS KSLTNLAKKMQKVYGIPYLEESFYGMTDVAKALRDIARELDDLVNGLEKRVMQDRVEKLVAECEESCRAELAPYRERLAG KKAVLFTGGVKTWSMVNALAELGVEILAAGTQNSTLEDFYRMKALMHEDASIIADTSTAGLLSVMYEKLPDLIVAGGKTK FLALKTKTPFLDINHGRSHPYAGYAGMVTFAKQLDLTVNNPIWPTLNDKAPWEKDAEAQKADLAYAAGHAARFAAEEIKA SRVKVPTKNATVNPQKNSPALGATLAYLGIDRMLGLLHGAQGCSTFIRLQLSRHFKESIALNSTSMSEETAIFGGWDNLR VGLNRVMEKFKPEVVGVMTTGLTETMGDDVRSAIVKFREAHPEHDAIPVIHASTPDYCGSMQEGYAAAVEAIVATVPEGG IGIPGQVSILPGCQLTPAEVEEIAGICEAFGLDPVVVPDISNALDGHIDATVSALSVGGATIERIKAAGRSEATLYFGDS LAEAAGVLQDKFGIPSYGFTSITGLKETDLLMATLSALSGRPIPVKFRRWRSRLMDAMVDSHYQFGQKKVALALEADHLK GMTHFLASLGCEIQVAIAATRTRGLDRLPTENVFVGDLEDLEQTAAGADLLVANSNGRQAAKKLGINAHLRTGMPVFDRL GAHQKMWVGYQGTLNLVFEVANIFQANAKEAQKLAHN
Specific function: This protein may play a role in the biosynthesis of the prosthetic group of nitrogenase (FeMo cofactor) [H]
COG id: COG2710
COG function: function code C; Nitrogenase molybdenum-iron protein, alpha and beta chains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nifD/nifK/nifE/nifN family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000510 - InterPro: IPR000318 - InterPro: IPR005973 [H]
Pfam domain/function: PF00148 Oxidored_nitro [H]
EC number: NA
Molecular weight: Translated: 99604; Mature: 99473
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: PS00699 NITROGENASE_1_1 ; PS00090 NITROGENASE_1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKPDWYDTTDCDTHDAGAPKFCKKSEPGEGTERSCAYDGARVVLMPITDVIHLVHGPIA CCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHCCCEE CAGNSWDNRGARSSDSQIYRRGFTTEMLQNDVIFGGEKKLYRAIQELAARYPEAKAIFVY ECCCCCCCCCCCCCCHHHHHHCCCHHHHHCCCEECCHHHHHHHHHHHHHHCCCCCEEEEE ATCVTSMTGDDIEAVCKAAQEKVSVPVIPVNTPGFIGDKNIGNRLAGETLFKYVIGTAEP EEHHHCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC EFTTDYDINLIGEYNIAGDLWGMLPLFDRLGIRVLSCISGDAKFEELRYAHRAKLNIIVC CCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCEEEEEEE SKSLTNLAKKMQKVYGIPYLEESFYGMTDVAKALRDIARELDDLVNGLEKRVMQDRVEKL CHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAECEESCRAELAPYRERLAGKKAVLFTGGVKTWSMVNALAELGVEILAAGTQNSTLEDF HHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCHHEEECCCCCCHHHHH YRMKALMHEDASIIADTSTAGLLSVMYEKLPDLIVAGGKTKFLALKTKTPFLDINHGRSH HHHHHHHHCCCCEEECCCHHHHHHHHHHHCCHHEEECCCEEEEEEECCCCEEECCCCCCC PYAGYAGMVTFAKQLDLTVNNPIWPTLNDKAPWEKDAEAQKADLAYAAGHAARFAAEEIK CCCCHHHHHHHHHHHCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH ASRVKVPTKNATVNPQKNSPALGATLAYLGIDRMLGLLHGAQGCSTFIRLQLSRHFKESI HHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH ALNSTSMSEETAIFGGWDNLRVGLNRVMEKFKPEVVGVMTTGLTETMGDDVRSAIVKFRE HCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCEEEHHHHCCHHHHHHHHHHHHHHHHH AHPEHDAIPVIHASTPDYCGSMQEGYAAAVEAIVATVPEGGIGIPGQVSILPGCQLTPAE CCCCCCCEEEEECCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCHHH VEEIAGICEAFGLDPVVVPDISNALDGHIDATVSALSVGGATIERIKAAGRSEATLYFGD HHHHHHHHHHHCCCCEECCCCHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCCCEEEEECC SLAEAAGVLQDKFGIPSYGFTSITGLKETDLLMATLSALSGRPIPVKFRRWRSRLMDAMV HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH DSHYQFGQKKVALALEADHLKGMTHFLASLGCEIQVAIAATRTRGLDRLPTENVFVGDLE HHHHHCCCCEEEEEEEHHHHHHHHHHHHHCCCEEEEEEEEHHHCCCCCCCCCCEEECCHH DLEQTAAGADLLVANSNGRQAAKKLGINAHLRTGMPVFDRLGAHQKMWVGYQGTLNLVFE HHHHHHCCCEEEEECCCCHHHHHHCCCCCEECCCCCHHHHCCCCCEEEEECCHHHHHHHH VANIFQANAKEAQKLAHN HHHHHHCCHHHHHHHHCC >Mature Secondary Structure AKPDWYDTTDCDTHDAGAPKFCKKSEPGEGTERSCAYDGARVVLMPITDVIHLVHGPIA CCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHCCCEE CAGNSWDNRGARSSDSQIYRRGFTTEMLQNDVIFGGEKKLYRAIQELAARYPEAKAIFVY ECCCCCCCCCCCCCCHHHHHHCCCHHHHHCCCEECCHHHHHHHHHHHHHHCCCCCEEEEE ATCVTSMTGDDIEAVCKAAQEKVSVPVIPVNTPGFIGDKNIGNRLAGETLFKYVIGTAEP EEHHHCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC EFTTDYDINLIGEYNIAGDLWGMLPLFDRLGIRVLSCISGDAKFEELRYAHRAKLNIIVC CCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCEEEEEEE SKSLTNLAKKMQKVYGIPYLEESFYGMTDVAKALRDIARELDDLVNGLEKRVMQDRVEKL CHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAECEESCRAELAPYRERLAGKKAVLFTGGVKTWSMVNALAELGVEILAAGTQNSTLEDF HHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCHHEEECCCCCCHHHHH YRMKALMHEDASIIADTSTAGLLSVMYEKLPDLIVAGGKTKFLALKTKTPFLDINHGRSH HHHHHHHHCCCCEEECCCHHHHHHHHHHHCCHHEEECCCEEEEEEECCCCEEECCCCCCC PYAGYAGMVTFAKQLDLTVNNPIWPTLNDKAPWEKDAEAQKADLAYAAGHAARFAAEEIK CCCCHHHHHHHHHHHCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH ASRVKVPTKNATVNPQKNSPALGATLAYLGIDRMLGLLHGAQGCSTFIRLQLSRHFKESI HHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH ALNSTSMSEETAIFGGWDNLRVGLNRVMEKFKPEVVGVMTTGLTETMGDDVRSAIVKFRE HCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCEEEHHHHCCHHHHHHHHHHHHHHHHH AHPEHDAIPVIHASTPDYCGSMQEGYAAAVEAIVATVPEGGIGIPGQVSILPGCQLTPAE CCCCCCCEEEEECCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCHHH VEEIAGICEAFGLDPVVVPDISNALDGHIDATVSALSVGGATIERIKAAGRSEATLYFGD HHHHHHHHHHHCCCCEECCCCHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCCCEEEEECC SLAEAAGVLQDKFGIPSYGFTSITGLKETDLLMATLSALSGRPIPVKFRRWRSRLMDAMV HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH DSHYQFGQKKVALALEADHLKGMTHFLASLGCEIQVAIAATRTRGLDRLPTENVFVGDLE HHHHHCCCCEEEEEEEHHHHHHHHHHHHHCCCEEEEEEEEHHHCCCCCCCCCCEEECCHH DLEQTAAGADLLVANSNGRQAAKKLGINAHLRTGMPVFDRLGAHQKMWVGYQGTLNLVFE HHHHHHCCCEEEEECCCCHHHHHHCCCCCEECCCCCHHHHCCCCCEEEEECCHHHHHHHH VANIFQANAKEAQKLAHN HHHHHHCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11759840 [H]