Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197118445

Identifier: 197118445

GI number: 197118445

Start: 2376834

End: 2378792

Strand: Direct

Name: 197118445

Synonym: Gbem_2063

Alternate gene names: NA

Gene position: 2376834-2378792 (Clockwise)

Preceding gene: 197118444

Following gene: 197118446

Centisome position: 51.5

GC content: 66.41

Gene sequence:

>1959_bases
ATGAGTTTGAAACATTTGCTAAAGGTAGCTTTCGCGGCTGTTATGACGATGGCATTGGCCTCGTGCGGTGGCGGCGGAGG
CGGCGGGGGGGGCGAGCCGCAGCTGACCAGCATGGGGGGAGCGTTGCAGGGGAGATCCCTGGCCCTGACCAATAGCGTGA
CCTCTTTCGCCGGTAGCGCCGGTTCCACCGACGGCGCTGCGTCGCAGGCGCGATTCAGCATTCCCGGCGACGTCGCCAGC
GACGGAACCAGTCTCTACGTCGTCGACACCGGCAACAGCGTCATCCGCAAGGTCGTCCTTGCCACCGGGGCCACGTCGAC
GGTCGCAGGGCTTGCGGGGATCACCGGCTCGGGCGACGGCACCGGTGCTGTCGCGAGGTTCAACTACCCCTCCGGCATTG
CCTTGAGCAGCGACAACTCCACGCTGTACGTCAGCGACACCGGCAACAACACCATCCGCAGCATAAACGTCGCTACCGGC
GCCGTGACCACCCTGGCCGGTACTGCGGGGGTCGTAGGTTCCACTAACGGCACCGGGGGGGCGGCCAGGTTCAGCTCCCC
CTCAGGCGTCGCCACCGACGGGGCCAACCTTTACGTCGCCGACAGCCTCAACCATCGCGTCCGCAAGATCGTCCTCGCCT
CGGCTGCGGTCACAACCCTTGCCGGCAGCGGTCTGCAGGATTTCGCCGACGGCACCGGCATAGCTGCCAGCTTCAATTCG
CCGCGCGGCATCGCCACCGACGGTGTCTCGCTCTATCTCGCGGATCAGGGCAATTCCGCGGTCAGGAGGATCATCATCGC
GACCGGTGTGGTCTCTACCTTGGTGCAGCCTGCCTCCGGCATAGAGTCGCCGGCCGGCATCGCGACCGACGGGACCAGCG
TTTTCGTCACCGACCTCGAGAGGAACAACCTGCGCAAGGTGGACATCGCCACCCAGGCAGTATCTACCCTGGCAGGCGAC
GGTGGTGGGAGCCCGGGAAGCACCGACGCGGTGGGGGGCGCGGCCCGCTTCAGCGCCCCTGCCGGCTTGGTTTTGAACGC
AGGCGTACTCTACGTAGCCGACACAGGAAACGATCTGCTGCGCAAGGTAGCCGTTGCCACCGGGGCCAGCTCCACCCTCG
CCGGGACAGTGGGGTCCGCCGACGGCGTAGGGGTCGCGGCTGCCTTCACCTCTCCCTACGACCTGACCACCGACGGCAGA
AACGTCTATGTAGCCGATACCAACAACCACACGGTGAGGCAGATCTCCATCGCCACGGGTGCAGTGACCACGCTGGCCGG
AACCCCCGACCGCGCAGGCTCCGGCGACGGCACCGGCGCCGCCGCCTCCTTCAGATTCCCAAGCGGCCTCACCACCGACG
GCACCAACCTCTTCGTCTCCGACACCGGCAACAACACGGTCAGGAAGATCGTCATCGCCACCGGAGCCGTTTCCACGCTG
GCCGGTACGGCCGGGGCCACCGGTTCGGCCGACGGTGCCGGGAGCGCGGCGAGGTTCCATTCCCCCAACGGCCTCACCAC
CGACGGGACCAACCTCTACGTTGCCGACAGCGGGAACAACGCCATCAGGAAGATCGTTATCGCCACCGGCGCGGTCTCGA
CCGCGGTGGCATCCTCCGCGGGCTTAAGTTCGCCCTACGGCGTCACCACCGACGGCACCACCCTATTCATCACCGACAGC
GGCAACCACAGGATCTGCAAGTTCACATTGGCAGGCTCCGCCTTCTCCTCCTTGACGGTTACCGGCGCTGCCTTCAACCT
TCCCAGCGGCATCACCACCGACGGCATCAGCCTCTTCGTCACCGACGCGGCCAACGGTTCGGTCAGCAGGATCGCCATTG
CCACCGGCGTCGCCGGAGCCGTCGTCACCGGGCTCAGGAACCCCAACGGCATCACCACCGACGGCGTCACGCTCTACGTC
GCCGATGCGCACGACAACACCGTGATCAGGGTGCACTGA

Upstream 100 bases:

>100_bases
TTTAGCGACTGGCTGTCGAGCGAAAATCAGGTTGCTGATAGTTACGCAACGAACCTTTTGTTGCCGGCAGATGAACCATT
AACAGGAAGTGGAGGTAAGA

Downstream 100 bases:

>100_bases
TGCGATGCTTCCTCATTTTAGTTGCGGTATTGCTCGCGTCGGCTACGGCCCACGCGGCCGAAGCTCTCTCCACCCCGAAG
GAGCGGACCAGCTACGCCAT

Product: lipoprotein

Products: NA

Alternate protein names: NHL Repeat-Containing Protein; Serine/Threonine Protein Kinase; NHL Repeat Protein; YD Repeat Protein; Lipoprotein; Redoxin Domain Protein; Hemagglutinin/Hemolysin-Related Protein; Redoxin Family; PKD Domain Containing Protein; SMP-30/Gluconolaconase/LRE Domain-Containing Protein; Copper Amine Oxidase Domain Protein; Immunoglobulin I-Set Domain-Containing Protein; Fibronectin Type III Domain Protein; Ascorbate-Dependent Monooxygenase; Redoxin Domain-Containing Protein; Leucine-Rich Repeat-Containing Protein; Ig Domain-Containing Protein

Number of amino acids: Translated: 652; Mature: 651

Protein sequence:

>652_residues
MSLKHLLKVAFAAVMTMALASCGGGGGGGGGEPQLTSMGGALQGRSLALTNSVTSFAGSAGSTDGAASQARFSIPGDVAS
DGTSLYVVDTGNSVIRKVVLATGATSTVAGLAGITGSGDGTGAVARFNYPSGIALSSDNSTLYVSDTGNNTIRSINVATG
AVTTLAGTAGVVGSTNGTGGAARFSSPSGVATDGANLYVADSLNHRVRKIVLASAAVTTLAGSGLQDFADGTGIAASFNS
PRGIATDGVSLYLADQGNSAVRRIIIATGVVSTLVQPASGIESPAGIATDGTSVFVTDLERNNLRKVDIATQAVSTLAGD
GGGSPGSTDAVGGAARFSAPAGLVLNAGVLYVADTGNDLLRKVAVATGASSTLAGTVGSADGVGVAAAFTSPYDLTTDGR
NVYVADTNNHTVRQISIATGAVTTLAGTPDRAGSGDGTGAAASFRFPSGLTTDGTNLFVSDTGNNTVRKIVIATGAVSTL
AGTAGATGSADGAGSAARFHSPNGLTTDGTNLYVADSGNNAIRKIVIATGAVSTAVASSAGLSSPYGVTTDGTTLFITDS
GNHRICKFTLAGSAFSSLTVTGAAFNLPSGITTDGISLFVTDAANGSVSRIAIATGVAGAVVTGLRNPNGITTDGVTLYV
ADAHDNTVIRVH

Sequences:

>Translated_652_residues
MSLKHLLKVAFAAVMTMALASCGGGGGGGGGEPQLTSMGGALQGRSLALTNSVTSFAGSAGSTDGAASQARFSIPGDVAS
DGTSLYVVDTGNSVIRKVVLATGATSTVAGLAGITGSGDGTGAVARFNYPSGIALSSDNSTLYVSDTGNNTIRSINVATG
AVTTLAGTAGVVGSTNGTGGAARFSSPSGVATDGANLYVADSLNHRVRKIVLASAAVTTLAGSGLQDFADGTGIAASFNS
PRGIATDGVSLYLADQGNSAVRRIIIATGVVSTLVQPASGIESPAGIATDGTSVFVTDLERNNLRKVDIATQAVSTLAGD
GGGSPGSTDAVGGAARFSAPAGLVLNAGVLYVADTGNDLLRKVAVATGASSTLAGTVGSADGVGVAAAFTSPYDLTTDGR
NVYVADTNNHTVRQISIATGAVTTLAGTPDRAGSGDGTGAAASFRFPSGLTTDGTNLFVSDTGNNTVRKIVIATGAVSTL
AGTAGATGSADGAGSAARFHSPNGLTTDGTNLYVADSGNNAIRKIVIATGAVSTAVASSAGLSSPYGVTTDGTTLFITDS
GNHRICKFTLAGSAFSSLTVTGAAFNLPSGITTDGISLFVTDAANGSVSRIAIATGVAGAVVTGLRNPNGITTDGVTLYV
ADAHDNTVIRVH
>Mature_651_residues
SLKHLLKVAFAAVMTMALASCGGGGGGGGGEPQLTSMGGALQGRSLALTNSVTSFAGSAGSTDGAASQARFSIPGDVASD
GTSLYVVDTGNSVIRKVVLATGATSTVAGLAGITGSGDGTGAVARFNYPSGIALSSDNSTLYVSDTGNNTIRSINVATGA
VTTLAGTAGVVGSTNGTGGAARFSSPSGVATDGANLYVADSLNHRVRKIVLASAAVTTLAGSGLQDFADGTGIAASFNSP
RGIATDGVSLYLADQGNSAVRRIIIATGVVSTLVQPASGIESPAGIATDGTSVFVTDLERNNLRKVDIATQAVSTLAGDG
GGSPGSTDAVGGAARFSAPAGLVLNAGVLYVADTGNDLLRKVAVATGASSTLAGTVGSADGVGVAAAFTSPYDLTTDGRN
VYVADTNNHTVRQISIATGAVTTLAGTPDRAGSGDGTGAAASFRFPSGLTTDGTNLFVSDTGNNTVRKIVIATGAVSTLA
GTAGATGSADGAGSAARFHSPNGLTTDGTNLYVADSGNNAIRKIVIATGAVSTAVASSAGLSSPYGVTTDGTTLFITDSG
NHRICKFTLAGSAFSSLTVTGAAFNLPSGITTDGISLFVTDAANGSVSRIAIATGVAGAVVTGLRNPNGITTDGVTLYVA
DAHDNTVIRVH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI42476013, Length=383, Percent_Identity=27.6762402088773, Blast_Score=107, Evalue=3e-23,
Organism=Drosophila melanogaster, GI116007528, Length=360, Percent_Identity=28.6111111111111, Blast_Score=83, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63446; Mature: 63314

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLKHLLKVAFAAVMTMALASCGGGGGGGGGEPQLTSMGGALQGRSLALTNSVTSFAGSA
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCEEEEECCHHHHCCCC
GSTDGAASQARFSIPGDVASDGTSLYVVDTGNSVIRKVVLATGATSTVAGLAGITGSGDG
CCCCCCCCCEEEECCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCHHHHHHCCCCCCCCC
TGAVARFNYPSGIALSSDNSTLYVSDTGNNTIRSINVATGAVTTLAGTAGVVGSTNGTGG
CCEEEEECCCCCEEEECCCCEEEEEECCCCEEEEEEEECCCEEHHCCCCCCEECCCCCCC
AARFSSPSGVATDGANLYVADSLNHRVRKIVLASAAVTTLAGSGLQDFADGTGIAASFNS
EEECCCCCCCEECCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEECCC
PRGIATDGVSLYLADQGNSAVRRIIIATGVVSTLVQPASGIESPAGIATDGTSVFVTDLE
CCCEEECCEEEEEECCCCHHHHHEEHHHHHHHHHHCCCCCCCCCCCEEECCCEEEEEECC
RNNLRKVDIATQAVSTLAGDGGGSPGSTDAVGGAARFSAPAGLVLNAGVLYVADTGNDLL
CCCCEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEEEECCHHHH
RKVAVATGASSTLAGTVGSADGVGVAAAFTSPYDLTTDGRNVYVADTNNHTVRQISIATG
HHHHHHCCCCCCEEECCCCCCCCEEEEEECCCCEECCCCCEEEEEECCCCEEEEEEEECC
AVTTLAGTPDRAGSGDGTGAAASFRFPSGLTTDGTNLFVSDTGNNTVRKIVIATGAVSTL
CEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCEEEEEEEECCCHHHH
AGTAGATGSADGAGSAARFHSPNGLTTDGTNLYVADSGNNAIRKIVIATGAVSTAVASSA
CCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCEEEEEEECCCHHHHHHHCC
GLSSPYGVTTDGTTLFITDSGNHRICKFTLAGSAFSSLTVTGAAFNLPSGITTDGISLFV
CCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCEEEEEEEEEECCCCCCCCCEEEEE
TDAANGSVSRIAIATGVAGAVVTGLRNPNGITTDGVTLYVADAHDNTVIRVH
EECCCCCEEEEEEECCCHHHHHHCCCCCCCCCCCCEEEEEEECCCCCEEEEC
>Mature Secondary Structure 
SLKHLLKVAFAAVMTMALASCGGGGGGGGGEPQLTSMGGALQGRSLALTNSVTSFAGSA
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCEEEEECCHHHHCCCC
GSTDGAASQARFSIPGDVASDGTSLYVVDTGNSVIRKVVLATGATSTVAGLAGITGSGDG
CCCCCCCCCEEEECCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCHHHHHHCCCCCCCCC
TGAVARFNYPSGIALSSDNSTLYVSDTGNNTIRSINVATGAVTTLAGTAGVVGSTNGTGG
CCEEEEECCCCCEEEECCCCEEEEEECCCCEEEEEEEECCCEEHHCCCCCCEECCCCCCC
AARFSSPSGVATDGANLYVADSLNHRVRKIVLASAAVTTLAGSGLQDFADGTGIAASFNS
EEECCCCCCCEECCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEECCC
PRGIATDGVSLYLADQGNSAVRRIIIATGVVSTLVQPASGIESPAGIATDGTSVFVTDLE
CCCEEECCEEEEEECCCCHHHHHEEHHHHHHHHHHCCCCCCCCCCCEEECCCEEEEEECC
RNNLRKVDIATQAVSTLAGDGGGSPGSTDAVGGAARFSAPAGLVLNAGVLYVADTGNDLL
CCCCEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEEEECCHHHH
RKVAVATGASSTLAGTVGSADGVGVAAAFTSPYDLTTDGRNVYVADTNNHTVRQISIATG
HHHHHHCCCCCCEEECCCCCCCCEEEEEECCCCEECCCCCEEEEEECCCCEEEEEEEECC
AVTTLAGTPDRAGSGDGTGAAASFRFPSGLTTDGTNLFVSDTGNNTVRKIVIATGAVSTL
CEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCEEEEEEEECCCHHHH
AGTAGATGSADGAGSAARFHSPNGLTTDGTNLYVADSGNNAIRKIVIATGAVSTAVASSA
CCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCEEEEEEECCCHHHHHHHCC
GLSSPYGVTTDGTTLFITDSGNHRICKFTLAGSAFSSLTVTGAAFNLPSGITTDGISLFV
CCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCEEEEEEEEEECCCCCCCCCEEEEE
TDAANGSVSRIAIATGVAGAVVTGLRNPNGITTDGVTLYVADAHDNTVIRVH
EECCCCCEEEEEEECCCHHHHHHCCCCCCCCCCCCEEEEEEECCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA