| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197118401
Identifier: 197118401
GI number: 197118401
Start: 2324039
End: 2324566
Strand: Direct
Name: 197118401
Synonym: Gbem_2019
Alternate gene names: NA
Gene position: 2324039-2324566 (Clockwise)
Preceding gene: 197118400
Following gene: 197118402
Centisome position: 50.36
GC content: 66.1
Gene sequence:
>528_bases ATGCAAGATTTTCCCGTTGTTCAGCTTCCCGAATCCATCCTTGACCTGCCGCAGGTCCGCGCCCAATGGCCCGGCACCTG TTTCGTCTGTTCCCAGGGGCATCCCCATGGCCTGCGCCTTCGCTTCCACCACACCGACGTCGGCGTCGCCTGCGTCTGCC GCATCCCCGCCGGCTACTGTGGCTTCGACGGCATGGTTCACGGCGGCATCATCTCGGCCCTCATGGACGAGGCGGCGGCC TATTCGCTCTTCGCCCGCCACGGCAAGCTCGGCGTGACGCGGGAGATGCAGACCCGATTCTTGAAGCCGGTCCCCACCGA AACGGAGCTCCGGGTAGTGGGGCAGATCGTTTCTTTCGCCGCTACGCAGGCGGAGGTCTCCATGGCCATCTTCGACGCGG CCGGACAGCGTCTCGCCGAAGGACGCACCTTCTGGGCCTTCCCGCGCCTCTCCCGCATCGCCGCCCTGGCAGGGGTTGAG GAAGCCGTTCTGCAGCGCTTTCTGGACGACTGCCAGGTGGTGGGGTAG
Upstream 100 bases:
>100_bases TTAACATCCCGCTGGCGCTCCGGTGGAAAAAAGGGTATTATCGCCGACGCTCCCTCATTAGGGTGCCGTGCGCTTTACTA CTTCTCCTGAGGAGCGACCG
Downstream 100 bases:
>100_bases GAAGCATTTGAGATTGGACGAAACAGGTCCCCCCTCCCAGGCGGGAGGGGGGGAGCAGACCTGCACTTTTCCGGCGGCAT AGCCGGTTTTATTTGAAACA
Product: thioesterase superfamily protein
Products: NA
Alternate protein names: Thioesterase Family Protein
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MQDFPVVQLPESILDLPQVRAQWPGTCFVCSQGHPHGLRLRFHHTDVGVACVCRIPAGYCGFDGMVHGGIISALMDEAAA YSLFARHGKLGVTREMQTRFLKPVPTETELRVVGQIVSFAATQAEVSMAIFDAAGQRLAEGRTFWAFPRLSRIAALAGVE EAVLQRFLDDCQVVG
Sequences:
>Translated_175_residues MQDFPVVQLPESILDLPQVRAQWPGTCFVCSQGHPHGLRLRFHHTDVGVACVCRIPAGYCGFDGMVHGGIISALMDEAAA YSLFARHGKLGVTREMQTRFLKPVPTETELRVVGQIVSFAATQAEVSMAIFDAAGQRLAEGRTFWAFPRLSRIAALAGVE EAVLQRFLDDCQVVG >Mature_175_residues MQDFPVVQLPESILDLPQVRAQWPGTCFVCSQGHPHGLRLRFHHTDVGVACVCRIPAGYCGFDGMVHGGIISALMDEAAA YSLFARHGKLGVTREMQTRFLKPVPTETELRVVGQIVSFAATQAEVSMAIFDAAGQRLAEGRTFWAFPRLSRIAALAGVE EAVLQRFLDDCQVVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19113; Mature: 19113
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDFPVVQLPESILDLPQVRAQWPGTCFVCSQGHPHGLRLRFHHTDVGVACVCRIPAGYC CCCCCCCCCCHHHHCCHHHHHCCCCEEEEECCCCCCCEEEEEEECCCCEEEEEECCCCCC GFDGMVHGGIISALMDEAAAYSLFARHGKLGVTREMQTRFLKPVPTETELRVVGQIVSFA CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHH ATQAEVSMAIFDAAGQRLAEGRTFWAFPRLSRIAALAGVEEAVLQRFLDDCQVVG HHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQDFPVVQLPESILDLPQVRAQWPGTCFVCSQGHPHGLRLRFHHTDVGVACVCRIPAGYC CCCCCCCCCCHHHHCCHHHHHCCCCEEEEECCCCCCCEEEEEEECCCCEEEEEECCCCCC GFDGMVHGGIISALMDEAAAYSLFARHGKLGVTREMQTRFLKPVPTETELRVVGQIVSFA CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHH ATQAEVSMAIFDAAGQRLAEGRTFWAFPRLSRIAALAGVEEAVLQRFLDDCQVVG HHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA