Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

Click here to switch to the map view.

The map label for this gene is 197118400

Identifier: 197118400

GI number: 197118400

Start: 2323353

End: 2323808

Strand: Direct

Name: 197118400

Synonym: Gbem_2018

Alternate gene names: NA

Gene position: 2323353-2323808 (Clockwise)

Preceding gene: 197118399

Following gene: 197118401

Centisome position: 50.34

GC content: 55.92

Gene sequence:

>456_bases
ATGGCGGAACTAACTACTGAGATAACTCTTGAGGCGCCGGTAGAGAGAATCTGGCAACTGTTGACGGACTTTGGACTCTA
TCCCGAATGGAACCCTCTCTTTATCAAGGCGACGGGACCAATCAATCCTGGAGAACGGTTCGACCTCGTGGTGAAACTTC
CCGGTATGGATCCATTCCCCATCAAGCCGGTACTGCAGGAGGCGGAGCCGAAGTTGCGGCTGTGCTGGAAAAGCAGCATG
ATCTCCAGCGTGGTGCTTAGTTGGACCTTCTGTTACGAGCTGCAAAGCCTGTCCCCGGAACGTTTGAGGATAACCCAGCG
CTCTTCGTTCCAGGGGCTCCTTGCGCCGCTCTTCACCTTCGCCATGAAGAAGCCGGTGACCGACGGCATGAATTCCCTGA
ACGACGCGCTCAAGCGCTGGGGCGAGAAGGGTAACGTCAGCTGCATGAAGTGCTGA

Upstream 100 bases:

>100_bases
CGGCCTTGCGGAAAAGGACTTTCAATCAGGGGGAAAATGGAGTATTCGGTACTGTCGGCTCTAGCCGGTAGTGCCAACAA
CAGCTTTCCGAGGTGGCAAC

Downstream 100 bases:

>100_bases
ATCTCGATGAAAATCTGATTTTTCAAGACCAGGCACCGGTTCATCCCGGTTCATCGGCACCGGTCCAACCTCTCGATACG
CCTATCGCTTTGTCTCGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: Activator Of; Cyclase/Dehydrase; ThiolDisulfide Interchange Domain Protein

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MAELTTEITLEAPVERIWQLLTDFGLYPEWNPLFIKATGPINPGERFDLVVKLPGMDPFPIKPVLQEAEPKLRLCWKSSM
ISSVVLSWTFCYELQSLSPERLRITQRSSFQGLLAPLFTFAMKKPVTDGMNSLNDALKRWGEKGNVSCMKC

Sequences:

>Translated_151_residues
MAELTTEITLEAPVERIWQLLTDFGLYPEWNPLFIKATGPINPGERFDLVVKLPGMDPFPIKPVLQEAEPKLRLCWKSSM
ISSVVLSWTFCYELQSLSPERLRITQRSSFQGLLAPLFTFAMKKPVTDGMNSLNDALKRWGEKGNVSCMKC
>Mature_150_residues
AELTTEITLEAPVERIWQLLTDFGLYPEWNPLFIKATGPINPGERFDLVVKLPGMDPFPIKPVLQEAEPKLRLCWKSSMI
SSVVLSWTFCYELQSLSPERLRITQRSSFQGLLAPLFTFAMKKPVTDGMNSLNDALKRWGEKGNVSCMKC

Specific function: Unknown

COG id: COG4891

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17167; Mature: 17036

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAELTTEITLEAPVERIWQLLTDFGLYPEWNPLFIKATGPINPGERFDLVVKLPGMDPFP
CCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCC
IKPVLQEAEPKLRLCWKSSMISSVVLSWTFCYELQSLSPERLRITQRSSFQGLLAPLFTF
CCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEECCCCHHHHHHHHHHH
AMKKPVTDGMNSLNDALKRWGEKGNVSCMKC
HHHCCCHHHHHHHHHHHHHCCCCCCEEEECC
>Mature Secondary Structure 
AELTTEITLEAPVERIWQLLTDFGLYPEWNPLFIKATGPINPGERFDLVVKLPGMDPFP
CCCCCEEEEHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCC
IKPVLQEAEPKLRLCWKSSMISSVVLSWTFCYELQSLSPERLRITQRSSFQGLLAPLFTF
CCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEECCCCHHHHHHHHHHH
AMKKPVTDGMNSLNDALKRWGEKGNVSCMKC
HHHCCCHHHHHHHHHHHHHCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA