Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197118391

Identifier: 197118391

GI number: 197118391

Start: 2313664

End: 2314290

Strand: Direct

Name: 197118391

Synonym: Gbem_2009

Alternate gene names: NA

Gene position: 2313664-2314290 (Clockwise)

Preceding gene: 197118390

Following gene: 197118392

Centisome position: 50.13

GC content: 55.66

Gene sequence:

>627_bases
ATGGACTCTATCTCCAATTTATCCGATGCCCAAGTTGTCCCATTAACGACGCAGCTGATGACTGTGCTCACCAAGAACCC
TTCTTTGTATGGTAGGGTGATGGGGGTCTACCCGACCTTGGAGGAACTCAAGTATCTGCACGAGAACCACATCGCCACCC
TCAACGACCCGAGCAGCGGAGAGCCCGAGAAGGTGATGGAACACCAAGCGAAGCGGCAGTTGCTCAACCGGAAGTTTGGT
GCATTCCACTCGGCGGTAAAGCTGGCCGCCACAGACGACCCGAGCCTGCTTGCCACCTTCGGCCTCAGCCAACCCAAGGC
GAAAAAATCAGCTTCCCCCGCGACCGTGAGCAGATCCGAAAAGTTGAAAGCTGTCCACGGGGACATCTCAGGTGAGATAT
TCCTGAAAGGTGTCCCCATCAAATACGCGAGGAGCTATGACATCGACTATTGCGAAGGGGATCCGTCTCTTGAAGAGAGT
TGGAAGCATCACAGCGTGGTGGCCCACGCATCGAAAATGAAGGTGACGGGCCTGACACCTGGGAGGGTCTACTGGTTCCG
GGTAAGAGGGATCGGAGCAAACGGCCCCGGTCCGTGGTCACCGTACGCGTCATTGATGGCAATTTAA

Upstream 100 bases:

>100_bases
GTGTGCTATGCCTGTATTGCCTTTCATGTTTTTTTCGATTCCTTCTTGCACCGGCAACAGTTGCTGCTAAGATCATTGGA
AATCTCTAAAGGAGGAGCGC

Downstream 100 bases:

>100_bases
GCTTAAAGATGTTACCGATCCCCTGGCAGGTTCCAAGCCTCCAGGGGATATCTTCGCAGTTCCCCTCACCAGAGATCCTT
TCTCACCCAAATCAGTTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MDSISNLSDAQVVPLTTQLMTVLTKNPSLYGRVMGVYPTLEELKYLHENHIATLNDPSSGEPEKVMEHQAKRQLLNRKFG
AFHSAVKLAATDDPSLLATFGLSQPKAKKSASPATVSRSEKLKAVHGDISGEIFLKGVPIKYARSYDIDYCEGDPSLEES
WKHHSVVAHASKMKVTGLTPGRVYWFRVRGIGANGPGPWSPYASLMAI

Sequences:

>Translated_208_residues
MDSISNLSDAQVVPLTTQLMTVLTKNPSLYGRVMGVYPTLEELKYLHENHIATLNDPSSGEPEKVMEHQAKRQLLNRKFG
AFHSAVKLAATDDPSLLATFGLSQPKAKKSASPATVSRSEKLKAVHGDISGEIFLKGVPIKYARSYDIDYCEGDPSLEES
WKHHSVVAHASKMKVTGLTPGRVYWFRVRGIGANGPGPWSPYASLMAI
>Mature_208_residues
MDSISNLSDAQVVPLTTQLMTVLTKNPSLYGRVMGVYPTLEELKYLHENHIATLNDPSSGEPEKVMEHQAKRQLLNRKFG
AFHSAVKLAATDDPSLLATFGLSQPKAKKSASPATVSRSEKLKAVHGDISGEIFLKGVPIKYARSYDIDYCEGDPSLEES
WKHHSVVAHASKMKVTGLTPGRVYWFRVRGIGANGPGPWSPYASLMAI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22778; Mature: 22778

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: PS50853 FN3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSISNLSDAQVVPLTTQLMTVLTKNPSLYGRVMGVYPTLEELKYLHENHIATLNDPSSG
CCCCCCCCCCEEEEHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCEEECCCCCCC
EPEKVMEHQAKRQLLNRKFGAFHSAVKLAATDDPSLLATFGLSQPKAKKSASPATVSRSE
CHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCHHH
KLKAVHGDISGEIFLKGVPIKYARSYDIDYCEGDPSLEESWKHHSVVAHASKMKVTGLTP
HHHHHCCCCCCEEEEECCCEEEECCCCCEECCCCCCHHHHHHHHHHHHHHCCEEEECCCC
GRVYWFRVRGIGANGPGPWSPYASLMAI
CEEEEEEEEEECCCCCCCCCCHHHHHCC
>Mature Secondary Structure
MDSISNLSDAQVVPLTTQLMTVLTKNPSLYGRVMGVYPTLEELKYLHENHIATLNDPSSG
CCCCCCCCCCEEEEHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCEEECCCCCCC
EPEKVMEHQAKRQLLNRKFGAFHSAVKLAATDDPSLLATFGLSQPKAKKSASPATVSRSE
CHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCHHH
KLKAVHGDISGEIFLKGVPIKYARSYDIDYCEGDPSLEESWKHHSVVAHASKMKVTGLTP
HHHHHCCCCCCEEEEECCCEEEECCCCCEECCCCCCHHHHHHHHHHHHHHCCEEEECCCC
GRVYWFRVRGIGANGPGPWSPYASLMAI
CEEEEEEEEEECCCCCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA