| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is zntR [C]
Identifier: 197118390
GI number: 197118390
Start: 2312824
End: 2313399
Strand: Direct
Name: zntR [C]
Synonym: Gbem_2008
Alternate gene names: 197118390
Gene position: 2312824-2313399 (Clockwise)
Preceding gene: 197118389
Following gene: 197118391
Centisome position: 50.11
GC content: 57.99
Gene sequence:
>576_bases ATGTTTCGCGTTACTGAGCTGGCACGCATCTTCGGCCTCTCGCGCAGCACCTTGCTTTATTATGACCGGATCGGGCTGTT GACGCCGTCCGGACGCAGCGAGGCCGGTTATCGTCTTTATTCGCAAAGCAACCGGGACCGGTTGTCGACCATCTGCAGCT TCCGCCAGGCCGGGTTGAGCATAGAAGACATCCAGCGCGTCTTAGCAAAGGAAGAGGATAGCAACGCCGCCATCCTGAAC CGGCGCATGCGTGAACTCAGCGAGGAGATCCGCACCCTGCAGGTCCAGCAGCATTTACTGGGGAAGATGCTGCAGGTTCA GTCGCAGGCAGAACTTCCCGTTACCATCGACAAGGAGGCATGGGTCGAGATGCTTCGCGCTGCCGGAATGGATGAAGCCG CCATGAACAGGTGGCACACCGAATTCGAGCGCCGGGCGCCCGAAGCCCATCACCAATTTCTGCTGTCCCTTGGGATATCA GAAGAAGAGACACTCGCCATTCGGAAGTGGTCGGTAGAAGGCTCCGACGGCAAAGCAACTGCATCGCACGCGGATTTTGC GGATGACAGGATATGA
Upstream 100 bases:
>100_bases TGCCGGCCGAGAGGATAAGGGAGATACGTCAGCAGTAGGTTCCAACCGGAACGCCTCCAGCTTTACAGGAGGCGTTCCTT CTTATCTAATCGAGGTGACA
Downstream 100 bases:
>100_bases CGGATTAATCTCTCGCCGGCCCCACCGGATGAGGGTCTTTCTTTACCAGAAGGTCATCGATCTCCTGCACCCTTTTACCA CTGCCCCTCCATATCCTCGG
Product: MerR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MerR Family; Transcriptional Regulator; Methyltransferase; MerR-Family Transcriptional Regulator; Transcriptional Activator TipA; Regulatory Protein MerR; SAM-Dependent Methyltransferase; Transcription Regulator; Mercuric Resistance Operon Regulatory Protein; Albicidin Resistance Protein; Transcriptional Regulator MerR Family Protein; TipA Family Transcription Regulator; Regulatory Protein
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MFRVTELARIFGLSRSTLLYYDRIGLLTPSGRSEAGYRLYSQSNRDRLSTICSFRQAGLSIEDIQRVLAKEEDSNAAILN RRMRELSEEIRTLQVQQHLLGKMLQVQSQAELPVTIDKEAWVEMLRAAGMDEAAMNRWHTEFERRAPEAHHQFLLSLGIS EEETLAIRKWSVEGSDGKATASHADFADDRI
Sequences:
>Translated_191_residues MFRVTELARIFGLSRSTLLYYDRIGLLTPSGRSEAGYRLYSQSNRDRLSTICSFRQAGLSIEDIQRVLAKEEDSNAAILN RRMRELSEEIRTLQVQQHLLGKMLQVQSQAELPVTIDKEAWVEMLRAAGMDEAAMNRWHTEFERRAPEAHHQFLLSLGIS EEETLAIRKWSVEGSDGKATASHADFADDRI >Mature_191_residues MFRVTELARIFGLSRSTLLYYDRIGLLTPSGRSEAGYRLYSQSNRDRLSTICSFRQAGLSIEDIQRVLAKEEDSNAAILN RRMRELSEEIRTLQVQQHLLGKMLQVQSQAELPVTIDKEAWVEMLRAAGMDEAAMNRWHTEFERRAPEAHHQFLLSLGIS EEETLAIRKWSVEGSDGKATASHADFADDRI
Specific function: Zinc-Responsive Transcriptional Regulator Of Znta. [C]
COG id: COG0789
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21826; Mature: 21826
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: PS50937 HTH_MERR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRVTELARIFGLSRSTLLYYDRIGLLTPSGRSEAGYRLYSQSNRDRLSTICSFRQAGLS CCHHHHHHHHHCCCCCCEEEEHHHCEECCCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCC IEDIQRVLAKEEDSNAAILNRRMRELSEEIRTLQVQQHLLGKMLQVQSQAELPVTIDKEA HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHH WVEMLRAAGMDEAAMNRWHTEFERRAPEAHHQFLLSLGISEEETLAIRKWSVEGSDGKAT HHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHEEEEEEECCCCCCCCC ASHADFADDRI CCCCCCCCCCC >Mature Secondary Structure MFRVTELARIFGLSRSTLLYYDRIGLLTPSGRSEAGYRLYSQSNRDRLSTICSFRQAGLS CCHHHHHHHHHCCCCCCEEEEHHHCEECCCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCC IEDIQRVLAKEEDSNAAILNRRMRELSEEIRTLQVQQHLLGKMLQVQSQAELPVTIDKEA HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHH WVEMLRAAGMDEAAMNRWHTEFERRAPEAHHQFLLSLGISEEETLAIRKWSVEGSDGKAT HHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHEEEEEEECCCCCCCCC ASHADFADDRI CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA