Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197118325

Identifier: 197118325

GI number: 197118325

Start: 2246069

End: 2246659

Strand: Direct

Name: 197118325

Synonym: Gbem_1942

Alternate gene names: NA

Gene position: 2246069-2246659 (Clockwise)

Preceding gene: 197118324

Following gene: 197118326

Centisome position: 48.67

GC content: 60.07

Gene sequence:

>591_bases
ATGAAAAAAGTAAGGTTATTGGCGCTGGGGGCTGTCTTCGCGGTTTTTGCCGGGTGCGCAGGGAGTCCGCAAGCGATGCT
GAAACAGGAGATAGTAAAAAGCGGTGAAGTCTTTTGGGAAATGGGCAAGGGAGGGGGGGCTCCGGAAGGGTATGCCGATC
TCACCGTCACCGCTTCCATAAAGACCCACAAAGAGCGCGCGTCCCTGGTGCGCGACCGCCACGGCAGCGCCGATTACACG
CTGCTTCTCTCCATCGACGGGCAGGCGGTGATTGTGACTGGGGAGGCCCGGCCGGAGCGAATGGAAGCCAGCCCGTTTGC
ACATTCTGAAGCAGGTAAAGGAGTCCGTTATCTCTTTACCAAGACCCTGCGGTTGCAGGCGGGGACGCACAGAATCGCGC
TTTCACTGCCGGAGGATCAGGTTGGAGTGGTGCATGACATCACCTTTGGGAGCGGCAGCGCGAACCAGTTGGTGCTGGAG
CCTGTGTACGCGGCAGTAGCCGGAAAGCCGCGCCCGGGCTTTACCGGGGCCACCTCCTTCAAAGAGGGAATCTCGCGGAT
GCAGGTTGCGCTCAACGGGACGATGCTGTGA

Upstream 100 bases:

>100_bases
AGAGGGAAATTCAAGAGGAAAGCTAGCCGCACAAAAAAAGGGGACAGGCTACTTTTTGAAATCAAAAAGTAGCCTGTCCC
CCTTCGAAAAAGGAGCAAGC

Downstream 100 bases:

>100_bases
GAGGGTGATAGGCCAGCATGCAAAGCTGGAGCTTTGCCTCGCATCGGGTTCCCAAGCTGGAGCTTGGGAACCAGGGGCAA
GGGGGACAGGCTACTTTTTG

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MKKVRLLALGAVFAVFAGCAGSPQAMLKQEIVKSGEVFWEMGKGGGAPEGYADLTVTASIKTHKERASLVRDRHGSADYT
LLLSIDGQAVIVTGEARPERMEASPFAHSEAGKGVRYLFTKTLRLQAGTHRIALSLPEDQVGVVHDITFGSGSANQLVLE
PVYAAVAGKPRPGFTGATSFKEGISRMQVALNGTML

Sequences:

>Translated_196_residues
MKKVRLLALGAVFAVFAGCAGSPQAMLKQEIVKSGEVFWEMGKGGGAPEGYADLTVTASIKTHKERASLVRDRHGSADYT
LLLSIDGQAVIVTGEARPERMEASPFAHSEAGKGVRYLFTKTLRLQAGTHRIALSLPEDQVGVVHDITFGSGSANQLVLE
PVYAAVAGKPRPGFTGATSFKEGISRMQVALNGTML
>Mature_196_residues
MKKVRLLALGAVFAVFAGCAGSPQAMLKQEIVKSGEVFWEMGKGGGAPEGYADLTVTASIKTHKERASLVRDRHGSADYT
LLLSIDGQAVIVTGEARPERMEASPFAHSEAGKGVRYLFTKTLRLQAGTHRIALSLPEDQVGVVHDITFGSGSANQLVLE
PVYAAVAGKPRPGFTGATSFKEGISRMQVALNGTML

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20758; Mature: 20758

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVRLLALGAVFAVFAGCAGSPQAMLKQEIVKSGEVFWEMGKGGGAPEGYADLTVTASI
CCCEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEEEEE
KTHKERASLVRDRHGSADYTLLLSIDGQAVIVTGEARPERMEASPFAHSEAGKGVRYLFT
HHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEE
KTLRLQAGTHRIALSLPEDQVGVVHDITFGSGSANQLVLEPVYAAVAGKPRPGFTGATSF
EHEEEECCCEEEEEECCCCCCCEEEEEECCCCCCCEEEHHHHHHHHCCCCCCCCCCCHHH
KEGISRMQVALNGTML
HHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKKVRLLALGAVFAVFAGCAGSPQAMLKQEIVKSGEVFWEMGKGGGAPEGYADLTVTASI
CCCEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEEEEE
KTHKERASLVRDRHGSADYTLLLSIDGQAVIVTGEARPERMEASPFAHSEAGKGVRYLFT
HHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEE
KTLRLQAGTHRIALSLPEDQVGVVHDITFGSGSANQLVLEPVYAAVAGKPRPGFTGATSF
EHEEEECCCEEEEEECCCCCCCEEEEEECCCCCCCEEEHHHHHHHHCCCCCCCCCCCHHH
KEGISRMQVALNGTML
HHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA