| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197118321
Identifier: 197118321
GI number: 197118321
Start: 2239658
End: 2240023
Strand: Direct
Name: 197118321
Synonym: Gbem_1938
Alternate gene names: NA
Gene position: 2239658-2240023 (Clockwise)
Preceding gene: 197118320
Following gene: 197118322
Centisome position: 48.53
GC content: 52.73
Gene sequence:
>366_bases ATGACAGAGAAACCACTTTTCAAACTCGTCTCCTGGTTCATACTTGCCTCCGTTTTTGCGGTGCTTTGCAACGGTGTATG CAGTACGGCCCATGCCCTGGAGTCCCAGATCTCCAACTCGCAGGATTCCGCCGTCACCGGCACAGCGGACAGCGTCGATA CTCCCTGCTGTCCTGACGATCATCATGACTCCGACGGCCCCGCATGCGATGACTGCGTCAATTGCCTGTGCCACGTCACA GTCGTTCCCCAGCTTTTCAGTCTGAACTACTTACCGGTCTTTTCCGATCTCTCTTCCTTTACTGCTTTCAGATTTATTCC CGAAGTCTATTTGCCCAAGTTCATTCCCCCCCAGAATCTCGCTTAA
Upstream 100 bases:
>100_bases AAGTCTTTCCTGGAGGAGCTTTTCGATTAATGGCGACTGTTACAGTTAAGTGGTTTCTCTTGACACGGTCCGTATACCTT CGCTATATTCGCGCCAGACT
Downstream 100 bases:
>100_bases TCCCCAGCTGTATTTTCATTGACTGTTGGCGCGGGTTGGCTTCGCCAGCACCTTGCAGGTCAGGCTGCCGACCGCTGCGC CGCCCCCGTTCGCCTTTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MTEKPLFKLVSWFILASVFAVLCNGVCSTAHALESQISNSQDSAVTGTADSVDTPCCPDDHHDSDGPACDDCVNCLCHVT VVPQLFSLNYLPVFSDLSSFTAFRFIPEVYLPKFIPPQNLA
Sequences:
>Translated_121_residues MTEKPLFKLVSWFILASVFAVLCNGVCSTAHALESQISNSQDSAVTGTADSVDTPCCPDDHHDSDGPACDDCVNCLCHVT VVPQLFSLNYLPVFSDLSSFTAFRFIPEVYLPKFIPPQNLA >Mature_120_residues TEKPLFKLVSWFILASVFAVLCNGVCSTAHALESQISNSQDSAVTGTADSVDTPCCPDDHHDSDGPACDDCVNCLCHVTV VPQLFSLNYLPVFSDLSSFTAFRFIPEVYLPKFIPPQNLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13144; Mature: 13013
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 6.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEKPLFKLVSWFILASVFAVLCNGVCSTAHALESQISNSQDSAVTGTADSVDTPCCPDD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC HHDSDGPACDDCVNCLCHVTVVPQLFSLNYLPVFSDLSSFTAFRFIPEVYLPKFIPPQNL CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC A C >Mature Secondary Structure TEKPLFKLVSWFILASVFAVLCNGVCSTAHALESQISNSQDSAVTGTADSVDTPCCPDD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC HHDSDGPACDDCVNCLCHVTVVPQLFSLNYLPVFSDLSSFTAFRFIPEVYLPKFIPPQNL CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA