Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197118308

Identifier: 197118308

GI number: 197118308

Start: 2227702

End: 2228190

Strand: Direct

Name: 197118308

Synonym: Gbem_1925

Alternate gene names: NA

Gene position: 2227702-2228190 (Clockwise)

Preceding gene: 197118307

Following gene: 197118313

Centisome position: 48.27

GC content: 58.28

Gene sequence:

>489_bases
ATGACCAAGCCAGCAAAGAATACGGTTTGCCTTTGGTACGACGGCGATGCGGAGGAGGCGGCGCGCTTTTACGCCAAGAC
CTTTCCCGATTCATCGGTCGACGCGGTGCATCTCGCACCGGGTGACTACCCGTCCGGCAAGAAGGGGGATGTGTTGACGG
TGGAGTTTACCGTGATGGGAATTCCCTGCCTTGGGCTCAATGGCGGACCGGAGGTCAAACACAACTGGGCATTCTCGTTT
CAGGTCGCGACCGTTGACCAGGAAGAAACGGATCGTTACTGGAACGCCATCGTAGGCAACGGCGGGGCAGAGAATGTGTG
CGGCTGGTGCCAGGATAAGTGGGGGGTGTCCTGGCAGATTACGCCGATTGTCCTGACCAAGGCGATAACGGATCCCGATA
CCGCTGCCGCCAAGCGCGCGTTCGATGCGATGATGCAGATGACGAAGATAGACGTCGCTGCAATCGAGGCGGCGCTTAAC
AGCAATTGA

Upstream 100 bases:

>100_bases
CTACTTCAACCTGTGGCCTGAGGGAATTGACCGGATTCTATACAACCTATATGATGCATGCCAAGGCGGGAATTGGGGGA
GCGCAGAAAGGAGAAATGAC

Downstream 100 bases:

>100_bases
CAATTGACGATTGACAATTGACAATTGACAATTGACAATTGACAATTGACAACTGGAACCACAGGGGAAAGACGCTCACC
GCAGAGGAGACACAGAGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: 3-Demethylubiquinone-9 3-Methyltransferase Family Protein; 3-Demethylubiquinone-9 3-Methyltransferase Domain Protein; Methyltransferase; 3-Demethylubiquinone-9 3-O-Methyltransferase; Signal Peptide; 3-Demethylubiquinone-9 3-Methyltransferase Family; 3-Demethylubiquinone-93- Methyltransferase Protein

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MTKPAKNTVCLWYDGDAEEAARFYAKTFPDSSVDAVHLAPGDYPSGKKGDVLTVEFTVMGIPCLGLNGGPEVKHNWAFSF
QVATVDQEETDRYWNAIVGNGGAENVCGWCQDKWGVSWQITPIVLTKAITDPDTAAAKRAFDAMMQMTKIDVAAIEAALN
SN

Sequences:

>Translated_162_residues
MTKPAKNTVCLWYDGDAEEAARFYAKTFPDSSVDAVHLAPGDYPSGKKGDVLTVEFTVMGIPCLGLNGGPEVKHNWAFSF
QVATVDQEETDRYWNAIVGNGGAENVCGWCQDKWGVSWQITPIVLTKAITDPDTAAAKRAFDAMMQMTKIDVAAIEAALN
SN
>Mature_161_residues
TKPAKNTVCLWYDGDAEEAARFYAKTFPDSSVDAVHLAPGDYPSGKKGDVLTVEFTVMGIPCLGLNGGPEVKHNWAFSFQ
VATVDQEETDRYWNAIVGNGGAENVCGWCQDKWGVSWQITPIVLTKAITDPDTAAAKRAFDAMMQMTKIDVAAIEAALNS
N

Specific function: Unknown

COG id: COG3865

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17566; Mature: 17435

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKPAKNTVCLWYDGDAEEAARFYAKTFPDSSVDAVHLAPGDYPSGKKGDVLTVEFTVMG
CCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCEEEEEEEEEE
IPCLGLNGGPEVKHNWAFSFQVATVDQEETDRYWNAIVGNGGAENVCGWCQDKWGVSWQI
EEEECCCCCCCCCEEEEEEEEEEECCCHHHHHHHHHEECCCCCCCCCCCCCCCCCCEEEE
TPIVLTKAITDPDTAAAKRAFDAMMQMTKIDVAAIEAALNSN
EHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TKPAKNTVCLWYDGDAEEAARFYAKTFPDSSVDAVHLAPGDYPSGKKGDVLTVEFTVMG
CCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCEEEEEEEEEE
IPCLGLNGGPEVKHNWAFSFQVATVDQEETDRYWNAIVGNGGAENVCGWCQDKWGVSWQI
EEEECCCCCCCCCEEEEEEEEEEECCCHHHHHHHHHEECCCCCCCCCCCCCCCCCCEEEE
TPIVLTKAITDPDTAAAKRAFDAMMQMTKIDVAAIEAALNSN
EHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA