| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197118292
Identifier: 197118292
GI number: 197118292
Start: 2210358
End: 2211074
Strand: Direct
Name: 197118292
Synonym: Gbem_1909
Alternate gene names: NA
Gene position: 2210358-2211074 (Clockwise)
Preceding gene: 197118291
Following gene: 308535269
Centisome position: 47.89
GC content: 40.31
Gene sequence:
>717_bases ATGGAGCCAAATGAAAAAAAGCCATATAACGATGGGATAGAGACTATTTTCCCCACACTTCAAAAGGAGTACGAAGGGGA AGAGAATCGGAACAAGCACCTTGAAACAAAAGTTCAAGTGCTACTTGCTGTTTCTGGTGTCCTTGCCTCTGCTCTAATGC TGTTGCTTAAGGCCATTGTCGATTCAGCGGGTCCAAAAGCGACAATCCTAATTATTCTATCCCACTCATTCCTATTCTTG ATAGCAGCTATTATTAGCTTTCTTTTGGCCTTCAGAATCAAAACCTTTAAGCAAATAGCGCATAATGCACTATTATCTGA CAAAGCATTTCAGATGGACAAACAAGAAGTTATGTATAACCTGTCCCATGACTATTATGAATGCATTAAATACAACGCTG AGGCTGCCGGATCAAAGGTAAGGCTCATTAAGTTTGGCAGTGTTTTGATGATAATATCCATTATTTTCTTAGTTATAGCT TTCGGTCACATTTCTTATAACATCATCAACAAGGAAAGGAGCAACTTTATGGCAAAGGACAACGAGAATAAAACTGGGAA CACTGGTTCAAACCAGACGGGAACAAATTCTGAACACTCTGAATCTGTAATCCGAGGTGGCAGAGTTTATGATTCGGAGC GGGGCGGATATAACAAAGGCCCCGGATTTGGAACTCAACCTCTTGAAAAATCTGAGTCTGGACTCAAAGAGAAGTAA
Upstream 100 bases:
>100_bases GTTTGATGGAGGTATGTGAGGGTCTGTGAGCAATGAATAGGCTGATATAGGTTTGCAGAAGGCCAGCCATGCGCTGGTCG ACGTAAAATAGAGGGAGCAA
Downstream 100 bases:
>100_bases CACGGCGGGGGACGCCAACAAGGCTTACGACCTGCCCGGAAAAACCGGCAGGTCAAAGCCATGCCCGTTGTGCAATGATT GAAAACAAACGAACCATGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 238; Mature: 238
Protein sequence:
>238_residues MEPNEKKPYNDGIETIFPTLQKEYEGEENRNKHLETKVQVLLAVSGVLASALMLLLKAIVDSAGPKATILIILSHSFLFL IAAIISFLLAFRIKTFKQIAHNALLSDKAFQMDKQEVMYNLSHDYYECIKYNAEAAGSKVRLIKFGSVLMIISIIFLVIA FGHISYNIINKERSNFMAKDNENKTGNTGSNQTGTNSEHSESVIRGGRVYDSERGGYNKGPGFGTQPLEKSESGLKEK
Sequences:
>Translated_238_residues MEPNEKKPYNDGIETIFPTLQKEYEGEENRNKHLETKVQVLLAVSGVLASALMLLLKAIVDSAGPKATILIILSHSFLFL IAAIISFLLAFRIKTFKQIAHNALLSDKAFQMDKQEVMYNLSHDYYECIKYNAEAAGSKVRLIKFGSVLMIISIIFLVIA FGHISYNIINKERSNFMAKDNENKTGNTGSNQTGTNSEHSESVIRGGRVYDSERGGYNKGPGFGTQPLEKSESGLKEK >Mature_238_residues MEPNEKKPYNDGIETIFPTLQKEYEGEENRNKHLETKVQVLLAVSGVLASALMLLLKAIVDSAGPKATILIILSHSFLFL IAAIISFLLAFRIKTFKQIAHNALLSDKAFQMDKQEVMYNLSHDYYECIKYNAEAAGSKVRLIKFGSVLMIISIIFLVIA FGHISYNIINKERSNFMAKDNENKTGNTGSNQTGTNSEHSESVIRGGRVYDSERGGYNKGPGFGTQPLEKSESGLKEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26486; Mature: 26486
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPNEKKPYNDGIETIFPTLQKEYEGEENRNKHLETKVQVLLAVSGVLASALMLLLKAIV CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DSAGPKATILIILSHSFLFLIAAIISFLLAFRIKTFKQIAHNALLSDKAFQMDKQEVMYN HCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSHDYYECIKYNAEAAGSKVRLIKFGSVLMIISIIFLVIAFGHISYNIINKERSNFMAKD HCHHHHHHHHHCHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC NENKTGNTGSNQTGTNSEHSESVIRGGRVYDSERGGYNKGPGFGTQPLEKSESGLKEK CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCC >Mature Secondary Structure MEPNEKKPYNDGIETIFPTLQKEYEGEENRNKHLETKVQVLLAVSGVLASALMLLLKAIV CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DSAGPKATILIILSHSFLFLIAAIISFLLAFRIKTFKQIAHNALLSDKAFQMDKQEVMYN HCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSHDYYECIKYNAEAAGSKVRLIKFGSVLMIISIIFLVIAFGHISYNIINKERSNFMAKD HCHHHHHHHHHCHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC NENKTGNTGSNQTGTNSEHSESVIRGGRVYDSERGGYNKGPGFGTQPLEKSESGLKEK CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA