Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

Click here to switch to the map view.

The map label for this gene is 197118292

Identifier: 197118292

GI number: 197118292

Start: 2210358

End: 2211074

Strand: Direct

Name: 197118292

Synonym: Gbem_1909

Alternate gene names: NA

Gene position: 2210358-2211074 (Clockwise)

Preceding gene: 197118291

Following gene: 308535269

Centisome position: 47.89

GC content: 40.31

Gene sequence:

>717_bases
ATGGAGCCAAATGAAAAAAAGCCATATAACGATGGGATAGAGACTATTTTCCCCACACTTCAAAAGGAGTACGAAGGGGA
AGAGAATCGGAACAAGCACCTTGAAACAAAAGTTCAAGTGCTACTTGCTGTTTCTGGTGTCCTTGCCTCTGCTCTAATGC
TGTTGCTTAAGGCCATTGTCGATTCAGCGGGTCCAAAAGCGACAATCCTAATTATTCTATCCCACTCATTCCTATTCTTG
ATAGCAGCTATTATTAGCTTTCTTTTGGCCTTCAGAATCAAAACCTTTAAGCAAATAGCGCATAATGCACTATTATCTGA
CAAAGCATTTCAGATGGACAAACAAGAAGTTATGTATAACCTGTCCCATGACTATTATGAATGCATTAAATACAACGCTG
AGGCTGCCGGATCAAAGGTAAGGCTCATTAAGTTTGGCAGTGTTTTGATGATAATATCCATTATTTTCTTAGTTATAGCT
TTCGGTCACATTTCTTATAACATCATCAACAAGGAAAGGAGCAACTTTATGGCAAAGGACAACGAGAATAAAACTGGGAA
CACTGGTTCAAACCAGACGGGAACAAATTCTGAACACTCTGAATCTGTAATCCGAGGTGGCAGAGTTTATGATTCGGAGC
GGGGCGGATATAACAAAGGCCCCGGATTTGGAACTCAACCTCTTGAAAAATCTGAGTCTGGACTCAAAGAGAAGTAA

Upstream 100 bases:

>100_bases
GTTTGATGGAGGTATGTGAGGGTCTGTGAGCAATGAATAGGCTGATATAGGTTTGCAGAAGGCCAGCCATGCGCTGGTCG
ACGTAAAATAGAGGGAGCAA

Downstream 100 bases:

>100_bases
CACGGCGGGGGACGCCAACAAGGCTTACGACCTGCCCGGAAAAACCGGCAGGTCAAAGCCATGCCCGTTGTGCAATGATT
GAAAACAAACGAACCATGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MEPNEKKPYNDGIETIFPTLQKEYEGEENRNKHLETKVQVLLAVSGVLASALMLLLKAIVDSAGPKATILIILSHSFLFL
IAAIISFLLAFRIKTFKQIAHNALLSDKAFQMDKQEVMYNLSHDYYECIKYNAEAAGSKVRLIKFGSVLMIISIIFLVIA
FGHISYNIINKERSNFMAKDNENKTGNTGSNQTGTNSEHSESVIRGGRVYDSERGGYNKGPGFGTQPLEKSESGLKEK

Sequences:

>Translated_238_residues
MEPNEKKPYNDGIETIFPTLQKEYEGEENRNKHLETKVQVLLAVSGVLASALMLLLKAIVDSAGPKATILIILSHSFLFL
IAAIISFLLAFRIKTFKQIAHNALLSDKAFQMDKQEVMYNLSHDYYECIKYNAEAAGSKVRLIKFGSVLMIISIIFLVIA
FGHISYNIINKERSNFMAKDNENKTGNTGSNQTGTNSEHSESVIRGGRVYDSERGGYNKGPGFGTQPLEKSESGLKEK
>Mature_238_residues
MEPNEKKPYNDGIETIFPTLQKEYEGEENRNKHLETKVQVLLAVSGVLASALMLLLKAIVDSAGPKATILIILSHSFLFL
IAAIISFLLAFRIKTFKQIAHNALLSDKAFQMDKQEVMYNLSHDYYECIKYNAEAAGSKVRLIKFGSVLMIISIIFLVIA
FGHISYNIINKERSNFMAKDNENKTGNTGSNQTGTNSEHSESVIRGGRVYDSERGGYNKGPGFGTQPLEKSESGLKEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26486; Mature: 26486

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPNEKKPYNDGIETIFPTLQKEYEGEENRNKHLETKVQVLLAVSGVLASALMLLLKAIV
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DSAGPKATILIILSHSFLFLIAAIISFLLAFRIKTFKQIAHNALLSDKAFQMDKQEVMYN
HCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSHDYYECIKYNAEAAGSKVRLIKFGSVLMIISIIFLVIAFGHISYNIINKERSNFMAKD
HCHHHHHHHHHCHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
NENKTGNTGSNQTGTNSEHSESVIRGGRVYDSERGGYNKGPGFGTQPLEKSESGLKEK
CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCC
>Mature Secondary Structure
MEPNEKKPYNDGIETIFPTLQKEYEGEENRNKHLETKVQVLLAVSGVLASALMLLLKAIV
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DSAGPKATILIILSHSFLFLIAAIISFLLAFRIKTFKQIAHNALLSDKAFQMDKQEVMYN
HCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSHDYYECIKYNAEAAGSKVRLIKFGSVLMIISIIFLVIAFGHISYNIINKERSNFMAKD
HCHHHHHHHHHCHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
NENKTGNTGSNQTGTNSEHSESVIRGGRVYDSERGGYNKGPGFGTQPLEKSESGLKEK
CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA