Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197118291

Identifier: 197118291

GI number: 197118291

Start: 2209150

End: 2209968

Strand: Direct

Name: 197118291

Synonym: Gbem_1908

Alternate gene names: NA

Gene position: 2209150-2209968 (Clockwise)

Preceding gene: 197118286

Following gene: 197118292

Centisome position: 47.87

GC content: 41.27

Gene sequence:

>819_bases
ATGAGACTTGACCGCGAGGTATTAAAGATCTTGAGTGTAAGACTCGGCGACCTAATCCAGTCAAGTAGAAGCGAAATTGA
AGTTGAAGCAGCCCAAATATACAATGATTTTGCTAGACGAAACATTGTAAGCCCTATGGCTCTTCGCATGGTGGCAGAAA
TGTGCTGCAAACATATAAAAAACAGAGGTCAGAAAATTTGTGACTTGTTCTCAGATCTTGCAGAACGCGGGGTACTTTCA
TTTATCCCTGAAACAAGAGATGAATTTTTTGGTATCGCAAGGGATCACATGAAGTCTGACTTGCAAAGGTTAAAAACAGT
GACTGATAGGCCGATGATTGGTAAATTCGACCCAACATCAATGCTCGAGGTCGCTATATCGGATGGCCTAGACCAAATTG
ATGCTCAGATAGGCATCCTCACGCTGACAAAAAAAGTTCCCTCCAATTCCACCAGTCAAACGTTGACGCTTTATAACTAT
GGAACAATAGGTGCAATTCAATCAGGTAGTAATATGACTGCTCAAATATCACAAAATGGAGTTGGGAGCAAAGAAGACCT
GTTAAAAGCGCTCGAAAATTTAAAGTCAGTACTCACTGGTGAAGACATAGCTAACAAACTAGATATAATTGACACTATTG
ATGAAGGCATCAAAGAACTCGATCAGGAAAGCGTAAATGTATTTAAACTTCAAGGCTACATAATGATGCTTGTGGCGGCA
CTCCAAACATTGCCAACCCTAAAGCCAGCCGTAGTTGTGCTGGCTCAGGCTTATGACTTTTACTTTGGTACCACAGTTTC
CGACGTTCTTGTTCAGTAA

Upstream 100 bases:

>100_bases
CGTCAATTGGTTTGGTAAAAAAATTTAATGTTGAGCGGCGACAAGGGGGGATGACGGCAACTTCCCTCTAATTACATAGT
TGGCCATTAGGAGACATGTT

Downstream 100 bases:

>100_bases
TATGCGCCCCAAGCAAAATATACTTAAAGACTACAAGCAAACCTAGGAGGATAGTGTGAACTACATTGTTGAGTGTTTTG
TCAGAAAACCAACTGATAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MRLDREVLKILSVRLGDLIQSSRSEIEVEAAQIYNDFARRNIVSPMALRMVAEMCCKHIKNRGQKICDLFSDLAERGVLS
FIPETRDEFFGIARDHMKSDLQRLKTVTDRPMIGKFDPTSMLEVAISDGLDQIDAQIGILTLTKKVPSNSTSQTLTLYNY
GTIGAIQSGSNMTAQISQNGVGSKEDLLKALENLKSVLTGEDIANKLDIIDTIDEGIKELDQESVNVFKLQGYIMMLVAA
LQTLPTLKPAVVVLAQAYDFYFGTTVSDVLVQ

Sequences:

>Translated_272_residues
MRLDREVLKILSVRLGDLIQSSRSEIEVEAAQIYNDFARRNIVSPMALRMVAEMCCKHIKNRGQKICDLFSDLAERGVLS
FIPETRDEFFGIARDHMKSDLQRLKTVTDRPMIGKFDPTSMLEVAISDGLDQIDAQIGILTLTKKVPSNSTSQTLTLYNY
GTIGAIQSGSNMTAQISQNGVGSKEDLLKALENLKSVLTGEDIANKLDIIDTIDEGIKELDQESVNVFKLQGYIMMLVAA
LQTLPTLKPAVVVLAQAYDFYFGTTVSDVLVQ
>Mature_272_residues
MRLDREVLKILSVRLGDLIQSSRSEIEVEAAQIYNDFARRNIVSPMALRMVAEMCCKHIKNRGQKICDLFSDLAERGVLS
FIPETRDEFFGIARDHMKSDLQRLKTVTDRPMIGKFDPTSMLEVAISDGLDQIDAQIGILTLTKKVPSNSTSQTLTLYNY
GTIGAIQSGSNMTAQISQNGVGSKEDLLKALENLKSVLTGEDIANKLDIIDTIDEGIKELDQESVNVFKLQGYIMMLVAA
LQTLPTLKPAVVVLAQAYDFYFGTTVSDVLVQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30141; Mature: 30141

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLDREVLKILSVRLGDLIQSSRSEIEVEAAQIYNDFARRNIVSPMALRMVAEMCCKHIK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
NRGQKICDLFSDLAERGVLSFIPETRDEFFGIARDHMKSDLQRLKTVTDRPMIGKFDPTS
HHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
MLEVAISDGLDQIDAQIGILTLTKKVPSNSTSQTLTLYNYGTIGAIQSGSNMTAQISQNG
HHHHHHHCCHHHHHHHHHHHEEECCCCCCCCCCEEEEEECCCCEEEECCCCCEEEECCCC
VGSKEDLLKALENLKSVLTGEDIANKLDIIDTIDEGIKELDQESVNVFKLQGYIMMLVAA
CCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQTLPTLKPAVVVLAQAYDFYFGTTVSDVLVQ
HHHCCCCHHHHHHHHHHHHHHHCCHHHHHHCC
>Mature Secondary Structure
MRLDREVLKILSVRLGDLIQSSRSEIEVEAAQIYNDFARRNIVSPMALRMVAEMCCKHIK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
NRGQKICDLFSDLAERGVLSFIPETRDEFFGIARDHMKSDLQRLKTVTDRPMIGKFDPTS
HHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
MLEVAISDGLDQIDAQIGILTLTKKVPSNSTSQTLTLYNYGTIGAIQSGSNMTAQISQNG
HHHHHHHCCHHHHHHHHHHHEEECCCCCCCCCCEEEEEECCCCEEEECCCCCEEEECCCC
VGSKEDLLKALENLKSVLTGEDIANKLDIIDTIDEGIKELDQESVNVFKLQGYIMMLVAA
CCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQTLPTLKPAVVVLAQAYDFYFGTTVSDVLVQ
HHHCCCCHHHHHHHHHHHHHHHCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA