| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is apgM [H]
Identifier: 197118262
GI number: 197118262
Start: 2174182
End: 2175381
Strand: Direct
Name: apgM [H]
Synonym: Gbem_1879
Alternate gene names: 197118262
Gene position: 2174182-2175381 (Clockwise)
Preceding gene: 197118261
Following gene: 197118263
Centisome position: 47.11
GC content: 64.83
Gene sequence:
>1200_bases ATGAAGTACGTAGTTCTTCTGGGCGACGGGATGTCGGACCAGGCTGTCGCCGCTCTCGACGGCAAGACGCCGCTGCAGGC GGCCAAGACCCCCAACATGGACTTCATGGCCAGACGCGGGAAGCTGGGGCTCGCCCACACGGTTCCCGAGGGGTACCCCC CCGGAAGCGACGTCGCCAACCTCTCCATGTTCGGCTACGACCCGGTTCAGTGCTACACCGGCCGTTCGCCGCTGGAAGCC GCCAGCATGGGAGTCGAGCTCGGCCCCGACGACGTCGCCTTCCGCGTCAACCTGGTGCACCTGGAAGCACGCGGCGGCAA GCTCATCATGGAAGACTACTCAGCCGGCCACATCACCACCGAAGACGGCCGCGAGCTGATCGAGGAGCTGCAGCGCCAGC TGGGGGACGAGGAATTCTCCTTCCACCCCGGGGTCAGCTACCGGCACCTGATGGTCTGGCACAACGGCAAGAGCCAGATC AAGGCGACCCCGCCGCACGACATCACCGGTCAGGACATCATCTCCCACATGCCGTCCGGGGAGGGGAGCGACCGCCTCAT CTACATCATGAACTCCGCGCAGATGATCTTTCACAACCACCCTCAGATGAAGCGGCGCTCCGCCAAGGGCGAGATCGCAG CCAACTCGATCTGGCTCTGGGGGCAGGGGAAGGCGCCGGCGATGGAGGAGTTCGGTCCCAAGTTCGGCCTCACCGGCGCC GTCATCTCCGCCGTCGACCTGATCAAGGGGATCGGCGTCTACGCCGGGCTCGACATCATCAACGTCCCCGGGGCCACCGG CTACCTCGATACCAACTTCGACGGCAAGGCCCAGGCCGCCATAGAGGCGCTCAAAGAGCGCGACTTCGTCTTCGTGCACG TGGAGGCACCCGACGAGGCCTCCCACTCGGGGAAGCTGGCCGACAAGATCAAGGCCATCGAACTCTTCGACGAGAAGGTG GTCGGCCCCGTGCTGGAAGGGGTGAAAAAGTACGGCGAGTACCGCATCCTCTGTGCGCCGGACCACCCTACGCCGATCGC GCTCATGACCCATACCTCCGACCCGGTCCCCTTCGTCATCTATGCCGGCGAAAAGGACGAGAAGCCGGAAGTGGCAGGGT ACGACGAATCCTCCGCCGCCGCCACCAAGCTCAAGGTCGACCCCGGCTACAAGCTGATGGAACTCCTCCTGGGGCGCTAA
Upstream 100 bases:
>100_bases ATGAGGTCCATGGGGTCCATAGAGTCCATTGGGTCCACAAAAGGGTAGGGTAAGACCAAAAGCAAACCACCAAACCAAAG CAGCAAAAAGGAAAGCCAAT
Downstream 100 bases:
>100_bases TCCCCGCCTTGCATCGCTTCCTTCAGGGCGCTCCCCCTCCATCCGGAGAGGGGAGCGCCTAAAGTCGTACCTGTATACCA CAAATATTAGTCGTACCCCT
Product: cofactor-independent phosphoglycerate mutase
Products: NA
Alternate protein names: BPG-independent PGAM; Phosphoglyceromutase; aPGAM [H]
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MKYVVLLGDGMSDQAVAALDGKTPLQAAKTPNMDFMARRGKLGLAHTVPEGYPPGSDVANLSMFGYDPVQCYTGRSPLEA ASMGVELGPDDVAFRVNLVHLEARGGKLIMEDYSAGHITTEDGRELIEELQRQLGDEEFSFHPGVSYRHLMVWHNGKSQI KATPPHDITGQDIISHMPSGEGSDRLIYIMNSAQMIFHNHPQMKRRSAKGEIAANSIWLWGQGKAPAMEEFGPKFGLTGA VISAVDLIKGIGVYAGLDIINVPGATGYLDTNFDGKAQAAIEALKERDFVFVHVEAPDEASHSGKLADKIKAIELFDEKV VGPVLEGVKKYGEYRILCAPDHPTPIALMTHTSDPVPFVIYAGEKDEKPEVAGYDESSAAATKLKVDPGYKLMELLLGR
Sequences:
>Translated_399_residues MKYVVLLGDGMSDQAVAALDGKTPLQAAKTPNMDFMARRGKLGLAHTVPEGYPPGSDVANLSMFGYDPVQCYTGRSPLEA ASMGVELGPDDVAFRVNLVHLEARGGKLIMEDYSAGHITTEDGRELIEELQRQLGDEEFSFHPGVSYRHLMVWHNGKSQI KATPPHDITGQDIISHMPSGEGSDRLIYIMNSAQMIFHNHPQMKRRSAKGEIAANSIWLWGQGKAPAMEEFGPKFGLTGA VISAVDLIKGIGVYAGLDIINVPGATGYLDTNFDGKAQAAIEALKERDFVFVHVEAPDEASHSGKLADKIKAIELFDEKV VGPVLEGVKKYGEYRILCAPDHPTPIALMTHTSDPVPFVIYAGEKDEKPEVAGYDESSAAATKLKVDPGYKLMELLLGR >Mature_399_residues MKYVVLLGDGMSDQAVAALDGKTPLQAAKTPNMDFMARRGKLGLAHTVPEGYPPGSDVANLSMFGYDPVQCYTGRSPLEA ASMGVELGPDDVAFRVNLVHLEARGGKLIMEDYSAGHITTEDGRELIEELQRQLGDEEFSFHPGVSYRHLMVWHNGKSQI KATPPHDITGQDIISHMPSGEGSDRLIYIMNSAQMIFHNHPQMKRRSAKGEIAANSIWLWGQGKAPAMEEFGPKFGLTGA VISAVDLIKGIGVYAGLDIINVPGATGYLDTNFDGKAQAAIEALKERDFVFVHVEAPDEASHSGKLADKIKAIELFDEKV VGPVLEGVKKYGEYRILCAPDHPTPIALMTHTSDPVPFVIYAGEKDEKPEVAGYDESSAAATKLKVDPGYKLMELLLGR
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]
COG id: COG3635
COG function: function code G; Predicted phosphoglycerate mutase, AP superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BPG-independent phosphoglycerate mutase family. A-PGAM subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR004456 - InterPro: IPR013371 - InterPro: IPR006124 [H]
Pfam domain/function: PF01676 Metalloenzyme; PF10143 PhosphMutase [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 43317; Mature: 43317
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYVVLLGDGMSDQAVAALDGKTPLQAAKTPNMDFMARRGKLGLAHTVPEGYPPGSDVAN CEEEEEECCCCCCCEEEEECCCCCCCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCCE LSMFGYDPVQCYTGRSPLEAASMGVELGPDDVAFRVNLVHLEARGGKLIMEDYSAGHITT EEEECCCCEEEECCCCCHHHHHCCCEECCCCEEEEEEEEEEECCCCEEEEEECCCCCEEC EDGRELIEELQRQLGDEEFSFHPGVSYRHLMVWHNGKSQIKATPPHDITGQDIISHMPSG HHHHHHHHHHHHHHCCCCEEECCCCCEEEEEEEECCCCCEEECCCCCCCHHHHHHHCCCC EGSDRLIYIMNSAQMIFHNHPQMKRRSAKGEIAANSIWLWGQGKAPAMEEFGPKFGLTGA CCCCEEEEEECCCEEEEECCCHHHHHCCCCCEEECEEEEEECCCCCCHHHCCCCCCCHHH VISAVDLIKGIGVYAGLDIINVPGATGYLDTNFDGKAQAAIEALKERDFVFVHVEAPDEA HHHHHHHHHHCHHHCCCEEEECCCCCCEEECCCCCHHHHHHHHHHCCCEEEEEEECCCCC SHSGKLADKIKAIELFDEKVVGPVLEGVKKYGEYRILCAPDHPTPIALMTHTSDPVPFVI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEECCCCCCEEE YAGEKDEKPEVAGYDESSAAATKLKVDPGYKLMELLLGR ECCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHCC >Mature Secondary Structure MKYVVLLGDGMSDQAVAALDGKTPLQAAKTPNMDFMARRGKLGLAHTVPEGYPPGSDVAN CEEEEEECCCCCCCEEEEECCCCCCCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCCE LSMFGYDPVQCYTGRSPLEAASMGVELGPDDVAFRVNLVHLEARGGKLIMEDYSAGHITT EEEECCCCEEEECCCCCHHHHHCCCEECCCCEEEEEEEEEEECCCCEEEEEECCCCCEEC EDGRELIEELQRQLGDEEFSFHPGVSYRHLMVWHNGKSQIKATPPHDITGQDIISHMPSG HHHHHHHHHHHHHHCCCCEEECCCCCEEEEEEEECCCCCEEECCCCCCCHHHHHHHCCCC EGSDRLIYIMNSAQMIFHNHPQMKRRSAKGEIAANSIWLWGQGKAPAMEEFGPKFGLTGA CCCCEEEEEECCCEEEEECCCHHHHHCCCCCEEECEEEEEECCCCCCHHHCCCCCCCHHH VISAVDLIKGIGVYAGLDIINVPGATGYLDTNFDGKAQAAIEALKERDFVFVHVEAPDEA HHHHHHHHHHCHHHCCCEEEECCCCCCEEECCCCCHHHHHHHHHHCCCEEEEEEECCCCC SHSGKLADKIKAIELFDEKVVGPVLEGVKKYGEYRILCAPDHPTPIALMTHTSDPVPFVI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEECCCCCCEEE YAGEKDEKPEVAGYDESSAAATKLKVDPGYKLMELLLGR ECCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA