Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197118239

Identifier: 197118239

GI number: 197118239

Start: 2151155

End: 2151634

Strand: Direct

Name: 197118239

Synonym: Gbem_1856

Alternate gene names: NA

Gene position: 2151155-2151634 (Clockwise)

Preceding gene: 197118238

Following gene: 197118252

Centisome position: 46.61

GC content: 66.67

Gene sequence:

>480_bases
ATGGCGGCCAGGTTTGGATGGGGAGCGCTAAGGGGGGCGGCGGCTGCCGTGGTCGGTTCCGGGATGTCCCCCGGCAAGCT
GTCGTTGACCATCTGCCTGGGGAGCGCGGTGGGGGTCATGCCCCTTCTCTGGGGGACGACCGTCATCTGCGTGGCGCTGG
CGGCAAGGCTCAGGCTGAACCAGGCCGCGATGCTTGCGGTGAACTACCTTTGCTACCCGTTGCAGCTGGCGCTGTTGCTG
CCGTTTTGCCGGCTGGGTGAGGCGATTTTTCCGTGGGGGGCGGCCGTAAACGCGGAGCTCCTCCTCGACGCCTTACATGG
CGGCATCGTTTCGTCGTTCCGACTGGTGGCATGGGCCACGGCGAAAGGCATCGGCGCGTGGGCGCTCACGGCGTTGCCGC
TGGCCCTTGTACTGCACCCCCTGCTGAGCGGCCGTTTCAAGGGCCGCTTAAGCGAAGGCGCCGCTTCTAGCAGTCGTTGA

Upstream 100 bases:

>100_bases
AACTTGGGGGGCAGAGCAAGATCCCCCATGTGGATCCGACCCTGGAGGGGGATCTGGTCGCGAGCCTGGCGCGCTACTGC
GGGGCTGGCGGCGCACGGTA

Downstream 100 bases:

>100_bases
GCTGCCTGGCCAGCTCTTCTCCGTAGATTATTACGTTGAGCCGGCGGTACGAATCCCGTATCTGCTGAAGTTGCTCAAGG
GAGCGGTCGAGGCTGCTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MAARFGWGALRGAAAAVVGSGMSPGKLSLTICLGSAVGVMPLLWGTTVICVALAARLRLNQAAMLAVNYLCYPLQLALLL
PFCRLGEAIFPWGAAVNAELLLDALHGGIVSSFRLVAWATAKGIGAWALTALPLALVLHPLLSGRFKGRLSEGAASSSR

Sequences:

>Translated_159_residues
MAARFGWGALRGAAAAVVGSGMSPGKLSLTICLGSAVGVMPLLWGTTVICVALAARLRLNQAAMLAVNYLCYPLQLALLL
PFCRLGEAIFPWGAAVNAELLLDALHGGIVSSFRLVAWATAKGIGAWALTALPLALVLHPLLSGRFKGRLSEGAASSSR
>Mature_158_residues
AARFGWGALRGAAAAVVGSGMSPGKLSLTICLGSAVGVMPLLWGTTVICVALAARLRLNQAAMLAVNYLCYPLQLALLLP
FCRLGEAIFPWGAAVNAELLLDALHGGIVSSFRLVAWATAKGIGAWALTALPLALVLHPLLSGRFKGRLSEGAASSSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16397; Mature: 16266

Theoretical pI: Translated: 10.69; Mature: 10.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAARFGWGALRGAAAAVVGSGMSPGKLSLTICLGSAVGVMPLLWGTTVICVALAARLRLN
CCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
QAAMLAVNYLCYPLQLALLLPFCRLGEAIFPWGAAVNAELLLDALHGGIVSSFRLVAWAT
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AKGIGAWALTALPLALVLHPLLSGRFKGRLSEGAASSSR
HCCCHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCC
>Mature Secondary Structure 
AARFGWGALRGAAAAVVGSGMSPGKLSLTICLGSAVGVMPLLWGTTVICVALAARLRLN
CCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
QAAMLAVNYLCYPLQLALLLPFCRLGEAIFPWGAAVNAELLLDALHGGIVSSFRLVAWAT
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AKGIGAWALTALPLALVLHPLLSGRFKGRLSEGAASSSR
HCCCHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA