| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is yegJ [H]
Identifier: 197118226
GI number: 197118226
Start: 2138467
End: 2138958
Strand: Reverse
Name: yegJ [H]
Synonym: Gbem_1842
Alternate gene names: 197118226
Gene position: 2138958-2138467 (Counterclockwise)
Preceding gene: 197118228
Following gene: 308535267
Centisome position: 46.35
GC content: 48.78
Gene sequence:
>492_bases ATGAAAAGAGTGCTGCTGCTAGTTGTCGGAATTGCCATGTTCATGGGAACAGGATGTAGTCGCAGCGCTGATAAAGAAGC TGACAACTTCAAACAGGTGCAGACGGAAGATCAAGCCATGAGTGCGGCAATTACCAAGGCCAAGGAATCCTCCGCAGATT TCGTCCGCGCGTTCCATGAGCAGCAACCGGGCACGAAAGACTTTTATGTCAAGAAACCTTATCCGACCCCTTCCAAGAAC AACGAACACATGTGGATTGAAGTAGCAGCGGAGAGAAATGGCGTTATCTCAGGTGTGATTGCCAATATTGCAGAGGAAAC CAGTGAGGTAAAACTAGGCGATGCGGTGACAGTAAAGGTCGATGAGATTAGCGACTGGAGATACCTGAATGGAAACAAGC TCGTCGGGGGTTACACGATCCGCTATTTCGTGGATAAGATGTCGCCGCAGGAAAAGGCGGAGTTCCTGAAAAAAGCTGGG TTCAAAATCTGA
Upstream 100 bases:
>100_bases TAGTCTCAGGGAGGCTACCCCTCAGGCATCACTAAAATAGTTCCAACGCGCAACTGCACCAGAAAAGAGAGCGGCCGCGG TCGGAGCAAGGGATGGAATC
Downstream 100 bases:
>100_bases ATCAACCATTTCGTAAACCTGAAAATGACCCACCTCCATTATCTGCGCCGCAGGGCCGCTTGCGCCATATTCAACTCCTG GACAGCCTGGCTTGTGTCAC
Product: lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MKRVLLLVVGIAMFMGTGCSRSADKEADNFKQVQTEDQAMSAAITKAKESSADFVRAFHEQQPGTKDFYVKKPYPTPSKN NEHMWIEVAAERNGVISGVIANIAEETSEVKLGDAVTVKVDEISDWRYLNGNKLVGGYTIRYFVDKMSPQEKAEFLKKAG FKI
Sequences:
>Translated_163_residues MKRVLLLVVGIAMFMGTGCSRSADKEADNFKQVQTEDQAMSAAITKAKESSADFVRAFHEQQPGTKDFYVKKPYPTPSKN NEHMWIEVAAERNGVISGVIANIAEETSEVKLGDAVTVKVDEISDWRYLNGNKLVGGYTIRYFVDKMSPQEKAEFLKKAG FKI >Mature_163_residues MKRVLLLVVGIAMFMGTGCSRSADKEADNFKQVQTEDQAMSAAITKAKESSADFVRAFHEQQPGTKDFYVKKPYPTPSKN NEHMWIEVAAERNGVISGVIANIAEETSEVKLGDAVTVKVDEISDWRYLNGNKLVGGYTIRYFVDKMSPQEKAEFLKKAG FKI
Specific function: Unknown
COG id: COG3779
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788386, Length=157, Percent_Identity=31.8471337579618, Blast_Score=72, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018756 [H]
Pfam domain/function: PF10077 DUF2314 [H]
EC number: NA
Molecular weight: Translated: 18174; Mature: 18174
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRVLLLVVGIAMFMGTGCSRSADKEADNFKQVQTEDQAMSAAITKAKESSADFVRAFHE CCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH QQPGTKDFYVKKPYPTPSKNNEHMWIEVAAERNGVISGVIANIAEETSEVKLGDAVTVKV CCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCEECCCEEEEEE DEISDWRYLNGNKLVGGYTIRYFVDKMSPQEKAEFLKKAGFKI ECCCCEEEECCCEEECCEEEEEHHHHCCHHHHHHHHHHCCCCC >Mature Secondary Structure MKRVLLLVVGIAMFMGTGCSRSADKEADNFKQVQTEDQAMSAAITKAKESSADFVRAFHE CCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH QQPGTKDFYVKKPYPTPSKNNEHMWIEVAAERNGVISGVIANIAEETSEVKLGDAVTVKV CCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCEECCCEEEEEE DEISDWRYLNGNKLVGGYTIRYFVDKMSPQEKAEFLKKAGFKI ECCCCEEEECCCEEECCEEEEEHHHHCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]