Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197118028

Identifier: 197118028

GI number: 197118028

Start: 1904992

End: 1906251

Strand: Direct

Name: 197118028

Synonym: Gbem_1641

Alternate gene names: NA

Gene position: 1904992-1906251 (Clockwise)

Preceding gene: 197118027

Following gene: 197118029

Centisome position: 41.28

GC content: 63.25

Gene sequence:

>1260_bases
TTGGCAAGTGTTGAAAACAGGCAGGTAGCAGCAGCGAGGCTCTCGCAGGGCGATTTCCAGGCGCTACCACTCGACGAGAA
GGGGAAGTATCTGAAGACGGCGCCGGCACGGGAGAAGATGGAGCTGATCATCGCGGACCCGAACGCGAAGAGGGTGGCCG
CCACCCTGGAGCCCCAGGAGTTTTTCTGGCTGGTCAAGGAGGTGGGCGAGGCCGACGCGGTGGAACTGCTGCAATTAGCG
TCCGCCGACCAGTGCATTTTCATCCTGGACATGGAGGCGTGGGAAGGGTGGACCTTCTCCGAGGAGCAGGTGTGTCACTG
GCTGGAGAAGTTCATGGAAGGTGGCGAGCCGCGGGTTCACGAGCTCTTGCAGCACCTCGATTTCGACCTGCTGCAGCTTT
TCCTGAGCCGTGAGATCGAGGTCGGCGGGGGGGTCGGCGACCAGTCCAACGACCAGGAACGCCTCGCCGAATACGATCAC
ACCTTCGACGGCGTCTTCATGATCAACTTCAAGAACCCCAAGCACAGCCAGCTGGTCGGTTCCTTCCTGTCCATGCTGAT
CAAGCTGGACAATTCCCTCTACACGGCACTCATGGAAGGGGCCAAGGGGGAGGTGGACCTGGAGTTGGAGGAGCAGTGCC
AGAGGTTCCGCACCGGCAGGCTTCAGGACCTCGGCTTCCCCCCGCTGGACGAGGCTCTTTCGATCTACGCCCGGGTGAAT
CCGGAGCATTTCCAACTGGAAGGGGGGAAGGAGTTGAGCCCGGCAGGGGAGGGGGGGGAACTGGTGCCCGTGAGCGCCGA
CGAGGGGACCTTCTTTTCCCGCGCGCTCGCCCTCGCCGCCACGCCGACGCTCTACCAGGAGCTGAACTACCTGGTCAACA
GCGCGCTGGTCGCGGAAGGAAACGCGTTCCACGAGCCGGAAGCGATGCTGGCCATACTGCGCCGGGTGAGCGGCTATCTC
AACATTGCGCTGGAGAGGCTGGCGCCGGCGGACGAGCAGCGGGCCGCCCGGATACTGGTAAGCGAGGAGTTGAAGCGGCT
GTTCCACCTGGGCTACAGCATCGTCCTGCAGTTGAAATTCAAGGCCCGGGAGGTCGAGACGACCGACTACGCCTCCGGGA
AGCTCCTTTCGGGGCTTAAGGCCAAGCGCCCACGCTTTTACCGCGGGCTGGACCCGGACGGCGTCGACGGCTACCGCGAG
TTCAGGGATCTTTCCGACGTCGAGCGCGTGGCCGGTCTTCTGGCCCAGCTAAAGCCGTAA

Upstream 100 bases:

>100_bases
CGCAAAGACGCCAAGAAAAGCTGAAAGCAATTTATTGTTTTTACTTTGCGTGCTTTGCGGCTTTGCGTGACACGCTTATA
AACATAAAAGGAGTTGCATA

Downstream 100 bases:

>100_bases
ACTCCTAGGGGGACTGGCTCCGATAGGTGCCTGTCCCCCTTGCCCCCCTTGTTCCCACTTCTTCCCCCTTAGACAGTCCC
GCCTCAATCCGCCCCTTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 419; Mature: 418

Protein sequence:

>419_residues
MASVENRQVAAARLSQGDFQALPLDEKGKYLKTAPAREKMELIIADPNAKRVAATLEPQEFFWLVKEVGEADAVELLQLA
SADQCIFILDMEAWEGWTFSEEQVCHWLEKFMEGGEPRVHELLQHLDFDLLQLFLSREIEVGGGVGDQSNDQERLAEYDH
TFDGVFMINFKNPKHSQLVGSFLSMLIKLDNSLYTALMEGAKGEVDLELEEQCQRFRTGRLQDLGFPPLDEALSIYARVN
PEHFQLEGGKELSPAGEGGELVPVSADEGTFFSRALALAATPTLYQELNYLVNSALVAEGNAFHEPEAMLAILRRVSGYL
NIALERLAPADEQRAARILVSEELKRLFHLGYSIVLQLKFKAREVETTDYASGKLLSGLKAKRPRFYRGLDPDGVDGYRE
FRDLSDVERVAGLLAQLKP

Sequences:

>Translated_419_residues
MASVENRQVAAARLSQGDFQALPLDEKGKYLKTAPAREKMELIIADPNAKRVAATLEPQEFFWLVKEVGEADAVELLQLA
SADQCIFILDMEAWEGWTFSEEQVCHWLEKFMEGGEPRVHELLQHLDFDLLQLFLSREIEVGGGVGDQSNDQERLAEYDH
TFDGVFMINFKNPKHSQLVGSFLSMLIKLDNSLYTALMEGAKGEVDLELEEQCQRFRTGRLQDLGFPPLDEALSIYARVN
PEHFQLEGGKELSPAGEGGELVPVSADEGTFFSRALALAATPTLYQELNYLVNSALVAEGNAFHEPEAMLAILRRVSGYL
NIALERLAPADEQRAARILVSEELKRLFHLGYSIVLQLKFKAREVETTDYASGKLLSGLKAKRPRFYRGLDPDGVDGYRE
FRDLSDVERVAGLLAQLKP
>Mature_418_residues
ASVENRQVAAARLSQGDFQALPLDEKGKYLKTAPAREKMELIIADPNAKRVAATLEPQEFFWLVKEVGEADAVELLQLAS
ADQCIFILDMEAWEGWTFSEEQVCHWLEKFMEGGEPRVHELLQHLDFDLLQLFLSREIEVGGGVGDQSNDQERLAEYDHT
FDGVFMINFKNPKHSQLVGSFLSMLIKLDNSLYTALMEGAKGEVDLELEEQCQRFRTGRLQDLGFPPLDEALSIYARVNP
EHFQLEGGKELSPAGEGGELVPVSADEGTFFSRALALAATPTLYQELNYLVNSALVAEGNAFHEPEAMLAILRRVSGYLN
IALERLAPADEQRAARILVSEELKRLFHLGYSIVLQLKFKAREVETTDYASGKLLSGLKAKRPRFYRGLDPDGVDGYREF
RDLSDVERVAGLLAQLKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46954; Mature: 46823

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASVENRQVAAARLSQGDFQALPLDEKGKYLKTAPAREKMELIIADPNAKRVAATLEPQE
CCCCCCCHHHHHHHCCCCCEECCCCCCCCEEECCCCCCCEEEEEECCCCCEEEEECCHHH
FFWLVKEVGEADAVELLQLASADQCIFILDMEAWEGWTFSEEQVCHWLEKFMEGGEPRVH
HHHHHHHHCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCHHHH
ELLQHLDFDLLQLFLSREIEVGGGVGDQSNDQERLAEYDHTFDGVFMINFKNPKHSQLVG
HHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEECCCCHHHHHH
SFLSMLIKLDNSLYTALMEGAKGEVDLELEEQCQRFRTGRLQDLGFPPLDEALSIYARVN
HHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCC
PEHFQLEGGKELSPAGEGGELVPVSADEGTFFSRALALAATPTLYQELNYLVNSALVAEG
CCEEEECCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
NAFHEPEAMLAILRRVSGYLNIALERLAPADEQRAARILVSEELKRLFHLGYSIVLQLKF
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHEEEEEEE
KAREVETTDYASGKLLSGLKAKRPRFYRGLDPDGVDGYREFRDLSDVERVAGLLAQLKP
HHCCCCCCCCCCCHHHHHHHHCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ASVENRQVAAARLSQGDFQALPLDEKGKYLKTAPAREKMELIIADPNAKRVAATLEPQE
CCCCCCHHHHHHHCCCCCEECCCCCCCCEEECCCCCCCEEEEEECCCCCEEEEECCHHH
FFWLVKEVGEADAVELLQLASADQCIFILDMEAWEGWTFSEEQVCHWLEKFMEGGEPRVH
HHHHHHHHCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCHHHH
ELLQHLDFDLLQLFLSREIEVGGGVGDQSNDQERLAEYDHTFDGVFMINFKNPKHSQLVG
HHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEECCCCHHHHHH
SFLSMLIKLDNSLYTALMEGAKGEVDLELEEQCQRFRTGRLQDLGFPPLDEALSIYARVN
HHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCC
PEHFQLEGGKELSPAGEGGELVPVSADEGTFFSRALALAATPTLYQELNYLVNSALVAEG
CCEEEECCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
NAFHEPEAMLAILRRVSGYLNIALERLAPADEQRAARILVSEELKRLFHLGYSIVLQLKF
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHEEEEEEE
KAREVETTDYASGKLLSGLKAKRPRFYRGLDPDGVDGYREFRDLSDVERVAGLLAQLKP
HHCCCCCCCCCCCHHHHHHHHCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA