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The map label for this gene is 197117972

Identifier: 197117972

GI number: 197117972

Start: 1839648

End: 1840052

Strand: Reverse

Name: 197117972

Synonym: Gbem_1585

Alternate gene names: NA

Gene position: 1840052-1839648 (Counterclockwise)

Preceding gene: 197118014

Following gene: 197117971

Centisome position: 39.87

GC content: 58.52

Gene sequence:

>405_bases
ATGCAGAGGCGTTTGGTCGTAACTTTGGCAATTCTGGCACTCGTCGCAACCTGTGTCACAGGATGCAAGAAGAAGAGCGA
AGAGCAAGCTCAACCTCCACAGAGCACCACCGCGGCTCCCGCTGCACCTGCAACACCACAACCGGCAGCTTCTGCAACCG
CGACCACTGGGGAGCAGCTCTTCAAACTGCACTGCGCAGCCTGCCACCCAAACGGCGGCAATACCATCACCCCGGCTAAG
ACTCTCAGCAAGAAAGCGATGGCCGACCGGAACATCAAGAGCACGGACGACATCGTGAAGATCATGCGCAACCCAGGCCC
CGGCATGAACAAGTTCGACGAGGGGATGATCCCGAAGGACGACGCCAAGAAGATCGGCGACTACATCCTGGCGACTTTCC
CCTGA

Upstream 100 bases:

>100_bases
ATAAAAAGTCAATTGCAGTGAATTGTCGACAGCACCGGAAGCGGCAGCCACTTTCTTTGGTATACTCCCCGGATGAATAA
ACCCTAACAGGAGGTGTCAC

Downstream 100 bases:

>100_bases
TCCGGAACCACCCTATTGCATACAGAGAGGGGGCGGAAAATTCCGCCCCCTCTTCGTATCTCCGCCCCCATGCAGTTTTG
TGACCCACTTCACTGCGCTT

Product: lipoprotein cytochrome c

Products: NA

Alternate protein names: Cytochrome C Family Protein; Lipoprotein Cytochrome C

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MQRRLVVTLAILALVATCVTGCKKKSEEQAQPPQSTTAAPAAPATPQPAASATATTGEQLFKLHCAACHPNGGNTITPAK
TLSKKAMADRNIKSTDDIVKIMRNPGPGMNKFDEGMIPKDDAKKIGDYILATFP

Sequences:

>Translated_134_residues
MQRRLVVTLAILALVATCVTGCKKKSEEQAQPPQSTTAAPAAPATPQPAASATATTGEQLFKLHCAACHPNGGNTITPAK
TLSKKAMADRNIKSTDDIVKIMRNPGPGMNKFDEGMIPKDDAKKIGDYILATFP
>Mature_134_residues
MQRRLVVTLAILALVATCVTGCKKKSEEQAQPPQSTTAAPAAPATPQPAASATATTGEQLFKLHCAACHPNGGNTITPAK
TLSKKAMADRNIKSTDDIVKIMRNPGPGMNKFDEGMIPKDDAKKIGDYILATFP

Specific function: Unknown

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14118; Mature: 14118

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRRLVVTLAILALVATCVTGCKKKSEEQAQPPQSTTAAPAAPATPQPAASATATTGEQL
CCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
FKLHCAACHPNGGNTITPAKTLSKKAMADRNIKSTDDIVKIMRNPGPGMNKFDEGMIPKD
HHHHHHHCCCCCCCEECHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHCCCCCCH
DAKKIGDYILATFP
HHHHHHHHHEECCC
>Mature Secondary Structure
MQRRLVVTLAILALVATCVTGCKKKSEEQAQPPQSTTAAPAAPATPQPAASATATTGEQL
CCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
FKLHCAACHPNGGNTITPAKTLSKKAMADRNIKSTDDIVKIMRNPGPGMNKFDEGMIPKD
HHHHHHHCCCCCCCEECHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHCCCCCCH
DAKKIGDYILATFP
HHHHHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA