| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
Click here to switch to the map view.
The map label for this gene is zraS [H]
Identifier: 197117920
GI number: 197117920
Start: 1777628
End: 1779094
Strand: Direct
Name: zraS [H]
Synonym: Gbem_1533
Alternate gene names: 197117920
Gene position: 1777628-1779094 (Clockwise)
Preceding gene: 197117919
Following gene: 197117921
Centisome position: 38.52
GC content: 62.51
Gene sequence:
>1467_bases ATGAAACCTACCCGGTTCAGCCTCACCTTCTATACCCTCTCCGCCCTGAGCATCATGCTGGTGCTCACCTGGGTGCTTCT TTCCGTAATCTCCTTCAACACCGCCGAAAAAGACCTGCTGAACCAAAAGGGGGAAGAAGGAAAGCTGTTGCTTTCCAGCA TCGTCCTTCTGCTGCCGCGTCCTTTGGCCCCGCCCGAACCAGGTTCGGCCGCGGCCAAGTACCTGGAGCACCTTAGGAAG GACCGTGCCTTCGTGGGGCTGCTGGTGATCGATTCCGCGGGGCGAGACCTCTACACCCTCTCCGATCCGGGCGGGGCCAA TGCCGCTTTGCTCGGCGTATTGCGCCGTGGGCGCGGGACCTTCCAGGTGTCGCCGGACGGCCGGCTTGCGTGGTGCTACC TTCCGGTCATGGAGCAGGGGAGGGCGATCGGGGCGGCTCGGCTCACCCTGTCGCTGCTTCCCGAGCGGGAAAAGCTCAGA GGTTCCCGGAACCTTTTTCTTTCCTACTTCATCCTCGATTTCCTGCTGCTCCTGGTGGTCGGCTCATATCTTCTTTCCTC AAGCGTAGTTGTGCCGATAAGAAGACTGTTGGCGGCGACCCGCAGAATCGCGGCGGGGGATTTGAGCGGCACCGTGGACA TCCCCGGAAGCCAGGAAGTGGCGGAACTGGGCGACGCCTTCAATACGATGGTGGTGGCGCTCAGGGAGAAGAGGGAGGAG GTCGAGGCAAATGTAGCCTCCTTGAACCGCGCCAACCGGGAGATCATCGAGGCGCGCAACGAGGCGATACGTTCCGAGAA GATGGCGTCCGTTGGGCTTTTGGCGGCCGGGATGGCACACGAAATCGGGACTCCGCTTGCGGCCATCATGGGGTACAGCG GGATTCTCTCCGAGGAGGTTGCCGGCGACCCGGAGAAGTCAGATTACCTGCGCAGGATCACCGAAGAGTCGAAGCGGATC GACAGGATCGTCAGGGGGCTTTTGGACTATGCCCGGCCCAAGGGTAGCCAGCGTGAGGAAATAGAAGTGCTGCAGCTGTT GGAGAAGGTGGTGGAGCTTCTGGAGGCACAGGGGGCGTTGAAGCTCTTGGAGGTCACGGTCGAGGCGGAGCCGTCCCTGC CGCGGCTGTATGCCGACCCGCACCAGTTGGAGCAGCTGCTCATCAACCTCATCATGAATGCCAAGGATGCCATGCCCAAG GGGGGCAAGCTGCAGCTCAAGGGGATGAGCGTGGGAGGGGGCGTCGCCATCGAGGTTGCCGACACCGGTGAAGGTATGCC GCCCGAGCACCTGCCGCTGGTATTCGACCCCTTCTTCACCACCAAGGAGCCCGGTAAGGGAACCGGTCTGGGGCTAGCCA TCGCGGCCAGGATAGCCGAGTCGTGCGGCGGGACACTCACCGTGCAAAGCGAGTTGGGAGAGGGGAGCCGGTTCAGGCTG ACGCTGCCGGCGGGAGGCAGTGGCTAG
Upstream 100 bases:
>100_bases CCATTCGGCCCCTTCCTGGCAAGCGGCGCCGTGCTCTACATCTTCTACGGCAACAGAATCATTCACTGGTACCTGAGCAT GGGAAGCTAAAGCGTCCCGT
Downstream 100 bases:
>100_bases GGGCTGGGGCCGCAAGGTCAGACAGGTCAGACAGGTCAGACAGGCTGGGCGTTTAGGAGAAAGTGTGACCGAGAAGAAGA AAATACTGGTGGTGGACGAC
Product: sensor histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 488; Mature: 488
Protein sequence:
>488_residues MKPTRFSLTFYTLSALSIMLVLTWVLLSVISFNTAEKDLLNQKGEEGKLLLSSIVLLLPRPLAPPEPGSAAAKYLEHLRK DRAFVGLLVIDSAGRDLYTLSDPGGANAALLGVLRRGRGTFQVSPDGRLAWCYLPVMEQGRAIGAARLTLSLLPEREKLR GSRNLFLSYFILDFLLLLVVGSYLLSSSVVVPIRRLLAATRRIAAGDLSGTVDIPGSQEVAELGDAFNTMVVALREKREE VEANVASLNRANREIIEARNEAIRSEKMASVGLLAAGMAHEIGTPLAAIMGYSGILSEEVAGDPEKSDYLRRITEESKRI DRIVRGLLDYARPKGSQREEIEVLQLLEKVVELLEAQGALKLLEVTVEAEPSLPRLYADPHQLEQLLINLIMNAKDAMPK GGKLQLKGMSVGGGVAIEVADTGEGMPPEHLPLVFDPFFTTKEPGKGTGLGLAIAARIAESCGGTLTVQSELGEGSRFRL TLPAGGSG
Sequences:
>Translated_488_residues MKPTRFSLTFYTLSALSIMLVLTWVLLSVISFNTAEKDLLNQKGEEGKLLLSSIVLLLPRPLAPPEPGSAAAKYLEHLRK DRAFVGLLVIDSAGRDLYTLSDPGGANAALLGVLRRGRGTFQVSPDGRLAWCYLPVMEQGRAIGAARLTLSLLPEREKLR GSRNLFLSYFILDFLLLLVVGSYLLSSSVVVPIRRLLAATRRIAAGDLSGTVDIPGSQEVAELGDAFNTMVVALREKREE VEANVASLNRANREIIEARNEAIRSEKMASVGLLAAGMAHEIGTPLAAIMGYSGILSEEVAGDPEKSDYLRRITEESKRI DRIVRGLLDYARPKGSQREEIEVLQLLEKVVELLEAQGALKLLEVTVEAEPSLPRLYADPHQLEQLLINLIMNAKDAMPK GGKLQLKGMSVGGGVAIEVADTGEGMPPEHLPLVFDPFFTTKEPGKGTGLGLAIAARIAESCGGTLTVQSELGEGSRFRL TLPAGGSG >Mature_488_residues MKPTRFSLTFYTLSALSIMLVLTWVLLSVISFNTAEKDLLNQKGEEGKLLLSSIVLLLPRPLAPPEPGSAAAKYLEHLRK DRAFVGLLVIDSAGRDLYTLSDPGGANAALLGVLRRGRGTFQVSPDGRLAWCYLPVMEQGRAIGAARLTLSLLPEREKLR GSRNLFLSYFILDFLLLLVVGSYLLSSSVVVPIRRLLAATRRIAAGDLSGTVDIPGSQEVAELGDAFNTMVVALREKREE VEANVASLNRANREIIEARNEAIRSEKMASVGLLAAGMAHEIGTPLAAIMGYSGILSEEVAGDPEKSDYLRRITEESKRI DRIVRGLLDYARPKGSQREEIEVLQLLEKVVELLEAQGALKLLEVTVEAEPSLPRLYADPHQLEQLLINLIMNAKDAMPK GGKLQLKGMSVGGGVAIEVADTGEGMPPEHLPLVFDPFFTTKEPGKGTGLGLAIAARIAESCGGTLTVQSELGEGSRFRL TLPAGGSG
Specific function: Member of the two-component regulatory system zraS/zraR. May function as a membrane-associated protein kinase that phosphorylates zraR in response to high concentrations of zinc or lead in the medium [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=225, Percent_Identity=35.1111111111111, Blast_Score=148, Evalue=9e-37, Organism=Escherichia coli, GI1788549, Length=233, Percent_Identity=33.9055793991416, Blast_Score=137, Evalue=1e-33, Organism=Escherichia coli, GI87081816, Length=344, Percent_Identity=29.3604651162791, Blast_Score=115, Evalue=5e-27, Organism=Escherichia coli, GI1789149, Length=349, Percent_Identity=25.7879656160458, Blast_Score=96, Evalue=4e-21, Organism=Escherichia coli, GI1790300, Length=237, Percent_Identity=31.6455696202532, Blast_Score=94, Evalue=3e-20, Organism=Escherichia coli, GI87082128, Length=221, Percent_Identity=30.316742081448, Blast_Score=92, Evalue=8e-20, Organism=Escherichia coli, GI1786600, Length=217, Percent_Identity=27.6497695852535, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI48994928, Length=222, Percent_Identity=31.0810810810811, Blast_Score=90, Evalue=4e-19, Organism=Escherichia coli, GI1786783, Length=513, Percent_Identity=24.1715399610136, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI145693157, Length=245, Percent_Identity=28.5714285714286, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1790861, Length=370, Percent_Identity=26.7567567567568, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI1786912, Length=248, Percent_Identity=31.0483870967742, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI1790346, Length=303, Percent_Identity=29.042904290429, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1788393, Length=290, Percent_Identity=23.448275862069, Blast_Score=69, Evalue=5e-13, Organism=Escherichia coli, GI1788279, Length=218, Percent_Identity=27.5229357798165, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI1787894, Length=301, Percent_Identity=26.2458471760797, Blast_Score=63, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 52613; Mature: 52613
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPTRFSLTFYTLSALSIMLVLTWVLLSVISFNTAEKDLLNQKGEEGKLLLSSIVLLLPR CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHCCC PLAPPEPGSAAAKYLEHLRKDRAFVGLLVIDSAGRDLYTLSDPGGANAALLGVLRRGRGT CCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCE FQVSPDGRLAWCYLPVMEQGRAIGAARLTLSLLPEREKLRGSRNLFLSYFILDFLLLLVV EEECCCCCEEEEEECHHHCCCCHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHH GSYLLSSSVVVPIRRLLAATRRIAAGDLSGTVDIPGSQEVAELGDAFNTMVVALREKREE HHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHH VEANVASLNRANREIIEARNEAIRSEKMASVGLLAAGMAHEIGTPLAAIMGYSGILSEEV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHH AGDPEKSDYLRRITEESKRIDRIVRGLLDYARPKGSQREEIEVLQLLEKVVELLEAQGAL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCE KLLEVTVEAEPSLPRLYADPHQLEQLLINLIMNAKDAMPKGGKLQLKGMSVGGGVAIEVA EEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEE DTGEGMPPEHLPLVFDPFFTTKEPGKGTGLGLAIAARIAESCGGTLTVQSELGEGSRFRL CCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCEEEE TLPAGGSG EECCCCCC >Mature Secondary Structure MKPTRFSLTFYTLSALSIMLVLTWVLLSVISFNTAEKDLLNQKGEEGKLLLSSIVLLLPR CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHCCC PLAPPEPGSAAAKYLEHLRKDRAFVGLLVIDSAGRDLYTLSDPGGANAALLGVLRRGRGT CCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCE FQVSPDGRLAWCYLPVMEQGRAIGAARLTLSLLPEREKLRGSRNLFLSYFILDFLLLLVV EEECCCCCEEEEEECHHHCCCCHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHH GSYLLSSSVVVPIRRLLAATRRIAAGDLSGTVDIPGSQEVAELGDAFNTMVVALREKREE HHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHH VEANVASLNRANREIIEARNEAIRSEKMASVGLLAAGMAHEIGTPLAAIMGYSGILSEEV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHH AGDPEKSDYLRRITEESKRIDRIVRGLLDYARPKGSQREEIEVLQLLEKVVELLEAQGAL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCE KLLEVTVEAEPSLPRLYADPHQLEQLLINLIMNAKDAMPKGGKLQLKGMSVGGGVAIEVA EEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEE DTGEGMPPEHLPLVFDPFFTTKEPGKGTGLGLAIAARIAESCGGTLTVQSELGEGSRFRL CCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCEEEE TLPAGGSG EECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11243806 [H]