| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197117911
Identifier: 197117911
GI number: 197117911
Start: 1764316
End: 1765209
Strand: Direct
Name: 197117911
Synonym: Gbem_1524
Alternate gene names: NA
Gene position: 1764316-1765209 (Clockwise)
Preceding gene: 197117898
Following gene: 197117913
Centisome position: 38.23
GC content: 63.09
Gene sequence:
>894_bases ATGGAAATCCCGCAGTACCCCAACTCCAGGGGGATCAACGTCGACGACAAGTCGCAGCTGGACCCGCTTTTCGACGCGCT GCAGCCGCGGGTCTCCGAACTCACCTTCGCGAACCTCTATCTATTCAGGAAGGCGCACGACTACAGGCTTACCCGGTTGG GGGACGCGGTGCTGGCGCTTGGGCGCGGCTACGACGGCTCCCCCTATTTTCTTCCCCCCTTTGGCGGCGACATTGCCGCC GCGACCCGCAGGCTTCTCGATGAAGGACTCACCCTCTACGGCGCCGACGACGGTTTCCTCTCCCGCTATCTCCCAAACTT TGGGCTCGAAGTGGTCCCCGACCGCGACAATTTCGACTATCTGCATCTGAAACAGGAGATGGCGGAACTTAACGGCAAAA AGTACCACAAGAAAAAGAACCGGGTGAATTACTTCCAGCTGCGGCACCGCCACCAGGTGGAGCTCTTCAACGAGGGGCAC CTGGATGGGGCGCTGGAACTATTGGAGCAGTGGCGCCGGGTGCGCGCCGAATTCGGTGAGGAGTCGTCGCTCGCCCAGGA GGTGGAGGGGGCGACCGAGGCGCTGAGGCTTAGGGAAGCGCTCGGGTTGTCGGGGGTGGTGGTGCTGGTCGATGGGGCGG TGAGGGGGTTCGCGCTAGGCGAGCGGCTGAACCGGGAGACGGCTGTCTGCCATTTTGAGAAGGGGGACCTGTTCCTGGAG GGGCTGTACCAGTTGCTGGACCGAGAGTTCTCCCGGCTCCTCTTCCCCGAGTGCAGCTACCTGAATCGGGAGCAGGACCT GGGGGAGCCCGCCTTGAGGCAGGCGAAGCTCTCCTACCACCCGGTGGAGCTGCTGGCGAAATACCGGGTCAGGCGCTCGC GCCATCCGTTTTGA
Upstream 100 bases:
>100_bases GTTCGCAATACTATCGTATACGGCGCGGCAATTGCCAGCGTTTTTTCGCATTTTTGCAAATATGTCGGTATACTGTTGAA AATTTTTTTCCGGAGCCGCC
Downstream 100 bases:
>100_bases AACGCAGGGATAGATAGCGCTCCAGCTCGACGGCCGCCTGGTCGAAATCCTCCATGCCAAGCTCCGTGTCCGCCTCCCAG CTGCGGTTTTTGTAGTAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MEIPQYPNSRGINVDDKSQLDPLFDALQPRVSELTFANLYLFRKAHDYRLTRLGDAVLALGRGYDGSPYFLPPFGGDIAA ATRRLLDEGLTLYGADDGFLSRYLPNFGLEVVPDRDNFDYLHLKQEMAELNGKKYHKKKNRVNYFQLRHRHQVELFNEGH LDGALELLEQWRRVRAEFGEESSLAQEVEGATEALRLREALGLSGVVVLVDGAVRGFALGERLNRETAVCHFEKGDLFLE GLYQLLDREFSRLLFPECSYLNREQDLGEPALRQAKLSYHPVELLAKYRVRRSRHPF
Sequences:
>Translated_297_residues MEIPQYPNSRGINVDDKSQLDPLFDALQPRVSELTFANLYLFRKAHDYRLTRLGDAVLALGRGYDGSPYFLPPFGGDIAA ATRRLLDEGLTLYGADDGFLSRYLPNFGLEVVPDRDNFDYLHLKQEMAELNGKKYHKKKNRVNYFQLRHRHQVELFNEGH LDGALELLEQWRRVRAEFGEESSLAQEVEGATEALRLREALGLSGVVVLVDGAVRGFALGERLNRETAVCHFEKGDLFLE GLYQLLDREFSRLLFPECSYLNREQDLGEPALRQAKLSYHPVELLAKYRVRRSRHPF >Mature_297_residues MEIPQYPNSRGINVDDKSQLDPLFDALQPRVSELTFANLYLFRKAHDYRLTRLGDAVLALGRGYDGSPYFLPPFGGDIAA ATRRLLDEGLTLYGADDGFLSRYLPNFGLEVVPDRDNFDYLHLKQEMAELNGKKYHKKKNRVNYFQLRHRHQVELFNEGH LDGALELLEQWRRVRAEFGEESSLAQEVEGATEALRLREALGLSGVVVLVDGAVRGFALGERLNRETAVCHFEKGDLFLE GLYQLLDREFSRLLFPECSYLNREQDLGEPALRQAKLSYHPVELLAKYRVRRSRHPF
Specific function: Unknown
COG id: COG4866
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34145; Mature: 34145
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIPQYPNSRGINVDDKSQLDPLFDALQPRVSELTFANLYLFRKAHDYRLTRLGDAVLAL CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH GRGYDGSPYFLPPFGGDIAAATRRLLDEGLTLYGADDGFLSRYLPNFGLEVVPDRDNFDY CCCCCCCCEECCCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHCCCCCCEEECCCCCCCH LHLKQEMAELNGKKYHKKKNRVNYFQLRHRHQVELFNEGHLDGALELLEQWRRVRAEFGE HHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC ESSLAQEVEGATEALRLREALGLSGVVVLVDGAVRGFALGERLNRETAVCHFEKGDLFLE HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCEEEEECCCCHHHH GLYQLLDREFSRLLFPECSYLNREQDLGEPALRQAKLSYHPVELLAKYRVRRSRHPF HHHHHHHHHHHHHHCCCHHHCCCHHHCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MEIPQYPNSRGINVDDKSQLDPLFDALQPRVSELTFANLYLFRKAHDYRLTRLGDAVLAL CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH GRGYDGSPYFLPPFGGDIAAATRRLLDEGLTLYGADDGFLSRYLPNFGLEVVPDRDNFDY CCCCCCCCEECCCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHCCCCCCEEECCCCCCCH LHLKQEMAELNGKKYHKKKNRVNYFQLRHRHQVELFNEGHLDGALELLEQWRRVRAEFGE HHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC ESSLAQEVEGATEALRLREALGLSGVVVLVDGAVRGFALGERLNRETAVCHFEKGDLFLE HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCEEEEECCCCHHHH GLYQLLDREFSRLLFPECSYLNREQDLGEPALRQAKLSYHPVELLAKYRVRRSRHPF HHHHHHHHHHHHHHCCCHHHCCCHHHCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA