| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
Click here to switch to the map view.
The map label for this gene is 197117905
Identifier: 197117905
GI number: 197117905
Start: 1757560
End: 1757871
Strand: Reverse
Name: 197117905
Synonym: Gbem_1518
Alternate gene names: NA
Gene position: 1757871-1757560 (Counterclockwise)
Preceding gene: 308535246
Following gene: 197117904
Centisome position: 38.09
GC content: 52.88
Gene sequence:
>312_bases ATGGCAGAAAGACAGTACGACTGGAAAGCAATCGCAAAAAATCCAAAATTCGTGGAACTGCACCACAAGAAGACGGCCTT CCTTTTCGGATGGTGGATCTTCTCCTGCGTGTACTACTTCCTGCTCCCTATCGGGGCGGCGTACACACCGGGGATCTTCA AGGTCAAGATGATCGGCGTCATCAACTTCGGGTATGTCTTCGCCCTCTCCCAGTTCTTCGTCTCCTGGGGAATCGCGCTC TACTACTCGCACGTCGCCAACAAGGACTTTGACCGGTTGACCAGGGAACTGATCGACGAACTGCATCTCTAG
Upstream 100 bases:
>100_bases AAATAAAAGGAAATCGGAAAGGGGGATTTATCGGAACTTGACCACGGGGGCGGGACGCCGTCACCACAACAGCGCAGCTT ACAAGAAAGGAGTGACTACC
Downstream 100 bases:
>100_bases GAAAGGAGGAACGACAATGACGATGAAAAAGATATTTATTGCAGCCACCCTGGCCCTCTCCGTTGCCGCTGCCGCCTTTG CCGAAGAGCAAAAGGCAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 103; Mature: 102
Protein sequence:
>103_residues MAERQYDWKAIAKNPKFVELHHKKTAFLFGWWIFSCVYYFLLPIGAAYTPGIFKVKMIGVINFGYVFALSQFFVSWGIAL YYSHVANKDFDRLTRELIDELHL
Sequences:
>Translated_103_residues MAERQYDWKAIAKNPKFVELHHKKTAFLFGWWIFSCVYYFLLPIGAAYTPGIFKVKMIGVINFGYVFALSQFFVSWGIAL YYSHVANKDFDRLTRELIDELHL >Mature_102_residues AERQYDWKAIAKNPKFVELHHKKTAFLFGWWIFSCVYYFLLPIGAAYTPGIFKVKMIGVINFGYVFALSQFFVSWGIALY YSHVANKDFDRLTRELIDELHL
Specific function: Unknown
COG id: COG3162
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12163; Mature: 12032
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAERQYDWKAIAKNPKFVELHHKKTAFLFGWWIFSCVYYFLLPIGAAYTPGIFKVKMIGV CCCCCCCHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHH INFGYVFALSQFFVSWGIALYYSHVANKDFDRLTRELIDELHL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC >Mature Secondary Structure AERQYDWKAIAKNPKFVELHHKKTAFLFGWWIFSCVYYFLLPIGAAYTPGIFKVKMIGV CCCCCCHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHH INFGYVFALSQFFVSWGIALYYSHVANKDFDRLTRELIDELHL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA