Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197117903

Identifier: 197117903

GI number: 197117903

Start: 1754127

End: 1755344

Strand: Reverse

Name: 197117903

Synonym: Gbem_1516

Alternate gene names: NA

Gene position: 1755344-1754127 (Counterclockwise)

Preceding gene: 197117904

Following gene: 197117902

Centisome position: 38.03

GC content: 61.99

Gene sequence:

>1218_bases
ATGCCACACCGGGTCTACCTACCAGAACCAAGCGACGCGGAACTCCTCAAAGAGCTCCTGGGGGAGGTGCACGCGTACCT
GCCGCTTTTGGACCGGGGAGAGATGCGCCGCTTCCTCAACGGGCTTAAGCTCGAAGTCGAAGAAGAGTTGGGAGAGTTGC
GCAACGCTTCCGGCGAGGAGGAGCAGCTTCTCGAGCGGGTGCGCCGCGAGTCCGACTACGGCCGGCTCTTCCAGATCCAC
GAGGAACTGAACCGGATCGAGATGGAGCGTTTCCTCTCCTTCTATTCGGTCACCGCGCTGCACGAGAACTGCACCAGTTA
CCGCGATGCCCTGGCCGACCGCGCCCTTCAACTGGTAATGGAGGAGATGGGCACCCCCCCGCCGGTCCCATTCGCCCTGA
TCAGCATGGGAAGCGACGGGCGGGAGGAGCAGACCCTCATCACCGACCAGGACTACCTGATCGTCTACGGCGACGAGGGA
GGGGAAGAGGCGGACGCCTGGTTCAGGCAGTACTCCGAGATCCTCGTGGAGCGGCTGGCGGAGATTGGTTTCAAGAAATG
CACCGGCGGCATCATGCCCTGCAACGACAATTGGCGCGGTTCGCTGTCGCAGTGGCAGCGGCGGCTTCTGGGGATAGTCC
GCTACGAGACCGAGGACTACGGCAAAAACCTGATGGACCTGATCGTACTTTCCGACGCCCGCTTCGTCGCCGGAGACGGC
GAGCTCGCCGGAGTCCTGGTAAGCCGGATCCGCTCGCTTTTACAGGACTACTTCATGGCGCTTTGGGGTATGGCCAAGGC
GGCCACCGAGATGCGGCTGGCACTAGGGTTTCTGAAGCGCTTCTGGACCGAGGGAAGCGGCGAGCACAAGGGGTGCTTCA
ACCTGAAGCTCCTCGCCTGGGCGCCGCTGGTGATGAACGTAAGGATTCTCGCCATCAACCAGGGGATCCCCGCCACCTCG
ACGGTGCGGCGCATCGAGCTTTTGGAGCGCGAGCACAGCTTTTCCGCGGAGAGTGCGCGCGGGCTTATCGAGGCGTACCG
GATCCTCACCAAACACCGCATCCTGCTCCAGGTCAAGGTGATCAAGGGGATTCAGGACGACGCCTACTACCTGAACCCCT
ACTCGCTTCCGGCCGACGAGCGGGAGAGGATCAGGCAGGCGCTTCTGATGATAGAGGACCTGCAGAAGACCATCCACACC
AACTTCTCCATAGTTTAG

Upstream 100 bases:

>100_bases
TTTTATACCTAGCCATCCGATCCGCTGCAAAACAGTTTTACATCATAGTTTTTTTCTGTAGAATCAACGCCACGATCTCA
TTTGAAAGCAGGCGGATAGC

Downstream 100 bases:

>100_bases
ATCCTTGCCCCTGCCCCCGCCGGGGCGGCGGCAAGGAACGGAGGCGCCATGAGCCAGCCGGAAAAAAACTATCAGGTCAA
CCTGTTGCGCCCGAAGCAAG

Product: nucleotidyltransferase

Products: NA

Alternate protein names: Nucleotidyltransferase; Signal-Transduction Protein; Signal Transduction Protein; Signal Transduction Protein With CBS Domains; Signal-Transduction Protein With CBS Domains; Nucleotidyltransferase Family; CBS Domain Protein; Signal Protein; Inosine-5-Monophosphate Dehydrogenase; Nucleotidyltransferase Domain Family Protein; DNA Polymerase III Subunit Epsilon; Endonuclease/Nucleotidyltransferase; Multidomain-Containing Protein; Cyclic Nucleotide-Regulated Nucleotidyltransferase; Methyl-Accepting Chemotaxis Protein A; Nucleotidyltransferases

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MPHRVYLPEPSDAELLKELLGEVHAYLPLLDRGEMRRFLNGLKLEVEEELGELRNASGEEEQLLERVRRESDYGRLFQIH
EELNRIEMERFLSFYSVTALHENCTSYRDALADRALQLVMEEMGTPPPVPFALISMGSDGREEQTLITDQDYLIVYGDEG
GEEADAWFRQYSEILVERLAEIGFKKCTGGIMPCNDNWRGSLSQWQRRLLGIVRYETEDYGKNLMDLIVLSDARFVAGDG
ELAGVLVSRIRSLLQDYFMALWGMAKAATEMRLALGFLKRFWTEGSGEHKGCFNLKLLAWAPLVMNVRILAINQGIPATS
TVRRIELLEREHSFSAESARGLIEAYRILTKHRILLQVKVIKGIQDDAYYLNPYSLPADERERIRQALLMIEDLQKTIHT
NFSIV

Sequences:

>Translated_405_residues
MPHRVYLPEPSDAELLKELLGEVHAYLPLLDRGEMRRFLNGLKLEVEEELGELRNASGEEEQLLERVRRESDYGRLFQIH
EELNRIEMERFLSFYSVTALHENCTSYRDALADRALQLVMEEMGTPPPVPFALISMGSDGREEQTLITDQDYLIVYGDEG
GEEADAWFRQYSEILVERLAEIGFKKCTGGIMPCNDNWRGSLSQWQRRLLGIVRYETEDYGKNLMDLIVLSDARFVAGDG
ELAGVLVSRIRSLLQDYFMALWGMAKAATEMRLALGFLKRFWTEGSGEHKGCFNLKLLAWAPLVMNVRILAINQGIPATS
TVRRIELLEREHSFSAESARGLIEAYRILTKHRILLQVKVIKGIQDDAYYLNPYSLPADERERIRQALLMIEDLQKTIHT
NFSIV
>Mature_404_residues
PHRVYLPEPSDAELLKELLGEVHAYLPLLDRGEMRRFLNGLKLEVEEELGELRNASGEEEQLLERVRRESDYGRLFQIHE
ELNRIEMERFLSFYSVTALHENCTSYRDALADRALQLVMEEMGTPPPVPFALISMGSDGREEQTLITDQDYLIVYGDEGG
EEADAWFRQYSEILVERLAEIGFKKCTGGIMPCNDNWRGSLSQWQRRLLGIVRYETEDYGKNLMDLIVLSDARFVAGDGE
LAGVLVSRIRSLLQDYFMALWGMAKAATEMRLALGFLKRFWTEGSGEHKGCFNLKLLAWAPLVMNVRILAINQGIPATST
VRRIELLEREHSFSAESARGLIEAYRILTKHRILLQVKVIKGIQDDAYYLNPYSLPADERERIRQALLMIEDLQKTIHTN
FSIV

Specific function: Unknown

COG id: COG2905

COG function: function code T; Predicted signal-transduction protein containing cAMP-binding and CBS domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46509; Mature: 46378

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHRVYLPEPSDAELLKELLGEVHAYLPLLDRGEMRRFLNGLKLEVEEELGELRNASGEE
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEHHHHHHHHHCCCCCH
EQLLERVRRESDYGRLFQIHEELNRIEMERFLSFYSVTALHENCTSYRDALADRALQLVM
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEMGTPPPVPFALISMGSDGREEQTLITDQDYLIVYGDEGGEEADAWFRQYSEILVERLA
HHHCCCCCCCEEEEECCCCCCCCCEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
EIGFKKCTGGIMPCNDNWRGSLSQWQRRLLGIVRYETEDYGKNLMDLIVLSDARFVAGDG
HCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHCCHHHHHHHCCCCCEEECCC
ELAGVLVSRIRSLLQDYFMALWGMAKAATEMRLALGFLKRFWTEGSGEHKGCFNLKLLAW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHH
APLVMNVRILAINQGIPATSTVRRIELLEREHSFSAESARGLIEAYRILTKHRILLQVKV
HHHHHCEEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEHH
IKGIQDDAYYLNPYSLPADERERIRQALLMIEDLQKTIHTNFSIV
HHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PHRVYLPEPSDAELLKELLGEVHAYLPLLDRGEMRRFLNGLKLEVEEELGELRNASGEE
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEHHHHHHHHHCCCCCH
EQLLERVRRESDYGRLFQIHEELNRIEMERFLSFYSVTALHENCTSYRDALADRALQLVM
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEMGTPPPVPFALISMGSDGREEQTLITDQDYLIVYGDEGGEEADAWFRQYSEILVERLA
HHHCCCCCCCEEEEECCCCCCCCCEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
EIGFKKCTGGIMPCNDNWRGSLSQWQRRLLGIVRYETEDYGKNLMDLIVLSDARFVAGDG
HCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHCCHHHHHHHCCCCCEEECCC
ELAGVLVSRIRSLLQDYFMALWGMAKAATEMRLALGFLKRFWTEGSGEHKGCFNLKLLAW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHH
APLVMNVRILAINQGIPATSTVRRIELLEREHSFSAESARGLIEAYRILTKHRILLQVKV
HHHHHCEEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEHH
IKGIQDDAYYLNPYSLPADERERIRQALLMIEDLQKTIHTNFSIV
HHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA