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The map label for this gene is atoS [C]

Identifier: 197117873

GI number: 197117873

Start: 1722704

End: 1725364

Strand: Reverse

Name: atoS [C]

Synonym: Gbem_1486

Alternate gene names: 197117873

Gene position: 1725364-1722704 (Counterclockwise)

Preceding gene: 197117874

Following gene: 308535242

Centisome position: 37.38

GC content: 60.35

Gene sequence:

>2661_bases
ATGGGAAAACGCGCCCTCAACCTGAGATCGAAGATCCTGGCCATATTCCTGACCCTCTCCATGGCGACCATAGCCGGCAT
GGTCGTGATCGCCCTTTTGTTCATCAAGCCCCTTCTGGAATCGAAGCTCGAAAAGCGCGCCCACTCCATAGCCCACGCCA
TCTCTTCCCAATGCACAAACCCGATCCTCTCCAGGAACTTCCTTCAGTTGGACCTGTATTTACGCGAGTACACCGACTTG
GAAAAGGACGTGGCCTACATCTACGTCACGACACCGAGCGGTGAGGTCATCGCCCACTCCTTCGGCCGTACCTTCCCCGT
GGCGCTGAAAGAGTTGAGCCAGCCGACCGGCAAAAAGTCAAACGGAAGCACCAGGCTCCACACGACGGAAGGAGAGGTCA
TCCAGATCTCGGAACCCATCCTCGACGGACATCTGGGCAGGCTGCATGTGGGAATGTCCCTCGCCCCGATACACAAGGAC
ATAAACGAGATCATCATGTCCTTCGTCAGTTTCGCAGCCCTGTTCTTCTTCTCGTCTTTGCTGCTGATACTGTTCATCGA
CAGGTGGATCGTCAGGCCCATTTTCCAGATCAGGTCCGCGTCGTTGAAGGTCAAAGCGGGGGACATCGACAGCAGGGTCA
CGGTACGATCCCGGGACGAGATCGGAAGCCTCGCCGAGGATTTCAACAGCATGCTCGACGCCATCAAGGAGTCAAGGGCG
TCGCTGGTTCAGGAAAAACAGCTGCTGACCGAAAGCGAAAACAGGCTGAGGAAAATCATCCAGCAAAGCCCCCTCTCGAT
GGCGCTCATCTCCCCGGACGGCGCCGTAGAGTACATAAACGACTACGCCGTGCAGACCTTCGGTTACCAGCCGCAGGACA
TACCCCGCATCGAAGACTGGTGGCTCAAGGCGTGCCCCGATCCGGCCTACCGCGAGCAGGTGATCGGGCAGTGGACTGGG
CTCGTGGAAAAGGCGGCCGAGGCAAGCGGCTACATCGAGCGTCGGGAATACCAGGTCACCTGCAAGGACGGAACGCTTAA
GACCATCCTGATTTTCGGGCTGCTGATCGACAGCGAGGTCTTCGTCGTCTTCGAGGACATCACCTCGCTCAAGCGGGTCG
AGGAAGAGTTGAGGGCCTCCAAAGAGCACCTGGACGCCACCATGAACGCCCTGCCGGATCTCTTGTTCAGGATCGACCGG
GAAGGCCGCTTCTACGATGCCCGCTATTCCAGCACGGACGAGCTCTACGTCGCGCCGGAGGTGTTCCTCGGCAAGCGGCT
GGTCGAGGTACTGCCGCCGGAGGCTGCAACCACCATCATGGCCGCGCTTGCCGAGGCCGTTGCCAAGGGGAGCCACCGGG
GGGCCACCTATTCGCTCCCACTGCCCGAGGGAGAGCGGTGGTACGAACTCTCGCTGGCCGCGATGGGAAACCCGGACCTG
CCGCAGACCCAATTTATCGTCCTTGCCCGCGACATCACCGAAAGGAGGCTTGCCGAGCAGGCGCGGCTCAAACTCGAACA
GCAGCTTCTCCACGCCCAGAAACTAGAGAGCCTCGGGGTATTGGCGGGGGGGATCGCCCATGACTTCAACAACCTGCTGA
CCGCCATCGTCGGCAACACCGATCTCGCCTTGATGCGTCTCAACCCGGAGTCGCCGGTACGGGACAACCTGCAGCGCATC
GAGCAGGCGGCCAGCCGTGCGGCAGACCTGTCCAAGCAGATGCTGGCGTACTCCGGCAAAGGGAAGTTCGTCATTCAAAC
CATCGACCTGAACCGGCTGATCAGGGAAATGACGCACATGCTGGAAGTTTCCATCTCCAAGAAGGCCGTGCTCAACTTCA
ACCTTGCCGATCCGCTGCCGCCCATCGAGGCCGACGCCACCCAGCTGCACCAGATCATCATGAACCTGATCATCAACGCC
TCCGAAGCCATCGACCGTGAGAGCGGGGTCATCTCGATTACTACCGGCAGCATGCAGTGCGCCAGGAACTACTTGAACGG
CATCTGGCTGCACGAGCAGCTTGCCGAGGGGCTCTACGTCTGGCTGGAGATAACCGACACCGGTTGCGGCATGGACGCGG
AAACGGCGGGGAAGATCTTCGACCCCTTCTTCACCACCAAGTTCACCGGCCGGGGGCTCGGCATGGCCGCCGTGCTCGGC
ATCGTCCGCGGCCACAAGGGGGCGATCACGGTCAAAAGCGAACCCGGCCGCGGCGCCTCCTTCAAGGTGTTCCTTCCTGC
CGGCGGCAAGCCAAAGGAAACCCTCGACCGGGCAGATCAGGATGCGGCGGAGTGGAGGGGCAGCGGAACCGTGCTGTTCG
TCGACGATGAACAGACGGTCCTGGAGATAGGGAGCGAGATGCTGAAGGAACTCGGTTTCGAGGTCGCAACCGCGGCGGAC
GGCGGCGAGGCGCTGGATATCTTCAAACAGGACGCGGATAGATTTTCCTTCATCATCCTGGACCTGACCATGCCCCGCCT
GGACGGCGAGCAGACCTACCGGCAGCTGAGGCAGCTAAAGCCCGAGGTCAAGGTCATCATGTCCAGCGGCTACAACGAAC
AGGAAATCAACCAGCGCCTGGGCGGCACGGGGCTGGCCGGTTTCATCCAGAAACCGTACAACCTCTCCATGCTCAGGGAC
GTCATCAGGAATATGAAGTAA

Upstream 100 bases:

>100_bases
ATGACCGAGAGCTATGTCCCCATAGAGGACAAGGCCTATGACTCGGTGCGCAACATGAAGAAATGGTTGGCCGGCGAGCA
AAAGGAGCGATAGTCAAGGC

Downstream 100 bases:

>100_bases
GTTAATTTATTGACTTGATCTTGGAGATGTTCTGAGGCGGTTACCGTTGCCGCCTTTCTCGACGCCCCGCACACGAGTCA
CACCGAGCAGTTCATCGTCA

Product: HAMP domain-containing sensor histidine kinase response regulator

Products: NA

Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]

Number of amino acids: Translated: 886; Mature: 885

Protein sequence:

>886_residues
MGKRALNLRSKILAIFLTLSMATIAGMVVIALLFIKPLLESKLEKRAHSIAHAISSQCTNPILSRNFLQLDLYLREYTDL
EKDVAYIYVTTPSGEVIAHSFGRTFPVALKELSQPTGKKSNGSTRLHTTEGEVIQISEPILDGHLGRLHVGMSLAPIHKD
INEIIMSFVSFAALFFFSSLLLILFIDRWIVRPIFQIRSASLKVKAGDIDSRVTVRSRDEIGSLAEDFNSMLDAIKESRA
SLVQEKQLLTESENRLRKIIQQSPLSMALISPDGAVEYINDYAVQTFGYQPQDIPRIEDWWLKACPDPAYREQVIGQWTG
LVEKAAEASGYIERREYQVTCKDGTLKTILIFGLLIDSEVFVVFEDITSLKRVEEELRASKEHLDATMNALPDLLFRIDR
EGRFYDARYSSTDELYVAPEVFLGKRLVEVLPPEAATTIMAALAEAVAKGSHRGATYSLPLPEGERWYELSLAAMGNPDL
PQTQFIVLARDITERRLAEQARLKLEQQLLHAQKLESLGVLAGGIAHDFNNLLTAIVGNTDLALMRLNPESPVRDNLQRI
EQAASRAADLSKQMLAYSGKGKFVIQTIDLNRLIREMTHMLEVSISKKAVLNFNLADPLPPIEADATQLHQIIMNLIINA
SEAIDRESGVISITTGSMQCARNYLNGIWLHEQLAEGLYVWLEITDTGCGMDAETAGKIFDPFFTTKFTGRGLGMAAVLG
IVRGHKGAITVKSEPGRGASFKVFLPAGGKPKETLDRADQDAAEWRGSGTVLFVDDEQTVLEIGSEMLKELGFEVATAAD
GGEALDIFKQDADRFSFIILDLTMPRLDGEQTYRQLRQLKPEVKVIMSSGYNEQEINQRLGGTGLAGFIQKPYNLSMLRD
VIRNMK

Sequences:

>Translated_886_residues
MGKRALNLRSKILAIFLTLSMATIAGMVVIALLFIKPLLESKLEKRAHSIAHAISSQCTNPILSRNFLQLDLYLREYTDL
EKDVAYIYVTTPSGEVIAHSFGRTFPVALKELSQPTGKKSNGSTRLHTTEGEVIQISEPILDGHLGRLHVGMSLAPIHKD
INEIIMSFVSFAALFFFSSLLLILFIDRWIVRPIFQIRSASLKVKAGDIDSRVTVRSRDEIGSLAEDFNSMLDAIKESRA
SLVQEKQLLTESENRLRKIIQQSPLSMALISPDGAVEYINDYAVQTFGYQPQDIPRIEDWWLKACPDPAYREQVIGQWTG
LVEKAAEASGYIERREYQVTCKDGTLKTILIFGLLIDSEVFVVFEDITSLKRVEEELRASKEHLDATMNALPDLLFRIDR
EGRFYDARYSSTDELYVAPEVFLGKRLVEVLPPEAATTIMAALAEAVAKGSHRGATYSLPLPEGERWYELSLAAMGNPDL
PQTQFIVLARDITERRLAEQARLKLEQQLLHAQKLESLGVLAGGIAHDFNNLLTAIVGNTDLALMRLNPESPVRDNLQRI
EQAASRAADLSKQMLAYSGKGKFVIQTIDLNRLIREMTHMLEVSISKKAVLNFNLADPLPPIEADATQLHQIIMNLIINA
SEAIDRESGVISITTGSMQCARNYLNGIWLHEQLAEGLYVWLEITDTGCGMDAETAGKIFDPFFTTKFTGRGLGMAAVLG
IVRGHKGAITVKSEPGRGASFKVFLPAGGKPKETLDRADQDAAEWRGSGTVLFVDDEQTVLEIGSEMLKELGFEVATAAD
GGEALDIFKQDADRFSFIILDLTMPRLDGEQTYRQLRQLKPEVKVIMSSGYNEQEINQRLGGTGLAGFIQKPYNLSMLRD
VIRNMK
>Mature_885_residues
GKRALNLRSKILAIFLTLSMATIAGMVVIALLFIKPLLESKLEKRAHSIAHAISSQCTNPILSRNFLQLDLYLREYTDLE
KDVAYIYVTTPSGEVIAHSFGRTFPVALKELSQPTGKKSNGSTRLHTTEGEVIQISEPILDGHLGRLHVGMSLAPIHKDI
NEIIMSFVSFAALFFFSSLLLILFIDRWIVRPIFQIRSASLKVKAGDIDSRVTVRSRDEIGSLAEDFNSMLDAIKESRAS
LVQEKQLLTESENRLRKIIQQSPLSMALISPDGAVEYINDYAVQTFGYQPQDIPRIEDWWLKACPDPAYREQVIGQWTGL
VEKAAEASGYIERREYQVTCKDGTLKTILIFGLLIDSEVFVVFEDITSLKRVEEELRASKEHLDATMNALPDLLFRIDRE
GRFYDARYSSTDELYVAPEVFLGKRLVEVLPPEAATTIMAALAEAVAKGSHRGATYSLPLPEGERWYELSLAAMGNPDLP
QTQFIVLARDITERRLAEQARLKLEQQLLHAQKLESLGVLAGGIAHDFNNLLTAIVGNTDLALMRLNPESPVRDNLQRIE
QAASRAADLSKQMLAYSGKGKFVIQTIDLNRLIREMTHMLEVSISKKAVLNFNLADPLPPIEADATQLHQIIMNLIINAS
EAIDRESGVISITTGSMQCARNYLNGIWLHEQLAEGLYVWLEITDTGCGMDAETAGKIFDPFFTTKFTGRGLGMAAVLGI
VRGHKGAITVKSEPGRGASFKVFLPAGGKPKETLDRADQDAAEWRGSGTVLFVDDEQTVLEIGSEMLKELGFEVATAADG
GEALDIFKQDADRFSFIILDLTMPRLDGEQTYRQLRQLKPEVKVIMSSGYNEQEINQRLGGTGLAGFIQKPYNLSMLRDV
IRNMK

Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788549, Length=397, Percent_Identity=27.9596977329975, Blast_Score=122, Evalue=9e-29,
Organism=Escherichia coli, GI1790436, Length=248, Percent_Identity=31.8548387096774, Blast_Score=121, Evalue=2e-28,
Organism=Escherichia coli, GI48994928, Length=536, Percent_Identity=23.6940298507463, Blast_Score=94, Evalue=3e-20,
Organism=Escherichia coli, GI87081816, Length=365, Percent_Identity=24.3835616438356, Blast_Score=80, Evalue=7e-16,
Organism=Escherichia coli, GI145693157, Length=279, Percent_Identity=25.8064516129032, Blast_Score=75, Evalue=2e-14,
Organism=Escherichia coli, GI1788713, Length=312, Percent_Identity=22.4358974358974, Blast_Score=74, Evalue=4e-14,
Organism=Escherichia coli, GI1790300, Length=281, Percent_Identity=24.9110320284698, Blast_Score=70, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR011006
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082
- InterPro:   IPR001789 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 98584; Mature: 98453

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: PS50885 HAMP ; PS50112 PAS ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKRALNLRSKILAIFLTLSMATIAGMVVIALLFIKPLLESKLEKRAHSIAHAISSQCTN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PILSRNFLQLDLYLREYTDLEKDVAYIYVTTPSGEVIAHSFGRTFPVALKELSQPTGKKS
HHHCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHCCCHHHHHHHHHCCCCCCCC
NGSTRLHTTEGEVIQISEPILDGHLGRLHVGMSLAPIHKDINEIIMSFVSFAALFFFSSL
CCCCEEEECCCCEEEECCCHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLILFIDRWIVRPIFQIRSASLKVKAGDIDSRVTVRSRDEIGSLAEDFNSMLDAIKESRA
HHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHH
SLVQEKQLLTESENRLRKIIQQSPLSMALISPDGAVEYINDYAVQTFGYQPQDIPRIEDW
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCHHHH
WLKACPDPAYREQVIGQWTGLVEKAAEASGYIERREYQVTCKDGTLKTILIFGLLIDSEV
HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECEEEEEECCCCHHHHHHHHHHHCCCE
FVVFEDITSLKRVEEELRASKEHLDATMNALPDLLFRIDREGRFYDARYSSTDELYVAPE
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCEEECHH
VFLGKRLVEVLPPEAATTIMAALAEAVAKGSHRGATYSLPLPEGERWYELSLAAMGNPDL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCEEEEEEEECCCCCC
PQTQFIVLARDITERRLAEQARLKLEQQLLHAQKLESLGVLAGGIAHDFNNLLTAIVGNT
CCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DLALMRLNPESPVRDNLQRIEQAASRAADLSKQMLAYSGKGKFVIQTIDLNRLIREMTHM
CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHH
LEVSISKKAVLNFNLADPLPPIEADATQLHQIIMNLIINASEAIDRESGVISITTGSMQC
HHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCEEEEECCCHHH
ARNYLNGIWLHEQLAEGLYVWLEITDTGCGMDAETAGKIFDPFFTTKFTGRGLGMAAVLG
HHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCHHCCHHHCEECCCCCHHHHHHH
IVRGHKGAITVKSEPGRGASFKVFLPAGGKPKETLDRADQDAAEWRGSGTVLFVDDEQTV
HHCCCCCEEEEECCCCCCCEEEEEECCCCCCHHHHHHCCCHHHHHCCCCEEEEECCCHHH
LEIGSEMLKELGFEVATAADGGEALDIFKQDADRFSFIILDLTMPRLDGEQTYRQLRQLK
HHHHHHHHHHCCCEEEECCCCCHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHC
PEVKVIMSSGYNEQEINQRLGGTGLAGFIQKPYNLSMLRDVIRNMK
HHHHHHHHCCCCHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
GKRALNLRSKILAIFLTLSMATIAGMVVIALLFIKPLLESKLEKRAHSIAHAISSQCTN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PILSRNFLQLDLYLREYTDLEKDVAYIYVTTPSGEVIAHSFGRTFPVALKELSQPTGKKS
HHHCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHCCCHHHHHHHHHCCCCCCCC
NGSTRLHTTEGEVIQISEPILDGHLGRLHVGMSLAPIHKDINEIIMSFVSFAALFFFSSL
CCCCEEEECCCCEEEECCCHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLILFIDRWIVRPIFQIRSASLKVKAGDIDSRVTVRSRDEIGSLAEDFNSMLDAIKESRA
HHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHH
SLVQEKQLLTESENRLRKIIQQSPLSMALISPDGAVEYINDYAVQTFGYQPQDIPRIEDW
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCHHHH
WLKACPDPAYREQVIGQWTGLVEKAAEASGYIERREYQVTCKDGTLKTILIFGLLIDSEV
HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECEEEEEECCCCHHHHHHHHHHHCCCE
FVVFEDITSLKRVEEELRASKEHLDATMNALPDLLFRIDREGRFYDARYSSTDELYVAPE
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCEEECHH
VFLGKRLVEVLPPEAATTIMAALAEAVAKGSHRGATYSLPLPEGERWYELSLAAMGNPDL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCEEEEEEEECCCCCC
PQTQFIVLARDITERRLAEQARLKLEQQLLHAQKLESLGVLAGGIAHDFNNLLTAIVGNT
CCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DLALMRLNPESPVRDNLQRIEQAASRAADLSKQMLAYSGKGKFVIQTIDLNRLIREMTHM
CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHH
LEVSISKKAVLNFNLADPLPPIEADATQLHQIIMNLIINASEAIDRESGVISITTGSMQC
HHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCEEEEECCCHHH
ARNYLNGIWLHEQLAEGLYVWLEITDTGCGMDAETAGKIFDPFFTTKFTGRGLGMAAVLG
HHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCHHCCHHHCEECCCCCHHHHHHH
IVRGHKGAITVKSEPGRGASFKVFLPAGGKPKETLDRADQDAAEWRGSGTVLFVDDEQTV
HHCCCCCEEEEECCCCCCCEEEEEECCCCCCHHHHHHCCCHHHHHCCCCEEEEECCCHHH
LEIGSEMLKELGFEVATAADGGEALDIFKQDADRFSFIILDLTMPRLDGEQTYRQLRQLK
HHHHHHHHHHCCCEEEECCCCCHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHC
PEVKVIMSSGYNEQEINQRLGGTGLAGFIQKPYNLSMLRDVIRNMK
HHHHHHHHCCCCHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA