| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is maeB-2 [H]
Identifier: 197117842
GI number: 197117842
Start: 1684354
End: 1686693
Strand: Direct
Name: maeB-2 [H]
Synonym: Gbem_1455
Alternate gene names: 197117842
Gene position: 1684354-1686693 (Clockwise)
Preceding gene: 197117841
Following gene: 197117843
Centisome position: 36.5
GC content: 63.63
Gene sequence:
>2340_bases ATGAAGAAGATGTCCGATGCACTGGAATACCATGCCACTGGCCGCAAGGGGAAGATCGAGGTAATCGCCACCAAGCCGTG CCAGACCGCGCAGGACCTGTCGCTGGCCTATTCGCCGGGAGTCGCCGAGCCCTGCCTCGCCATCGAGCAGAACCCTGAGG ACGCCTACCAGTACACCGCCAAGGGGAACTTGGTGGCCGTGGTATCCAACGGCACCGCCGTCCTTGGCCTCGGCAACATC GGCGCGCTCGCGGGCAAGCCGGTCATGGAAGGGAAGGGGGTTCTCTTCAAGCGCTTCGCCGACGTCGACGTCTTCGATAT CGAGTTGAACAGCGAGGACCCGGACGAGATCATCAAGGCCTGCCAGCTTCTGGAGCCCACCTTCGGCGGCATCAACCTGG AGGACATCAAGGCGCCCGAGTGCTTCTACATCGAAGAGGAACTGAAGAAGACCATGAACATCCCGGTCTTCCACGACGAC CAGCACGGAACGGCGATCATCTCGGCAGCCGGGCTCATCAACGCGCTCGAACTGGTCGGCAAGAAGATAGAGGACGTGAA GATAGTGGTGAACGGCGCAGGCGCATCGGCCAACGCATGCGCGAACCTCGCCATCTCCCTGGGCCTCAAGCTGGAAAACC TCATCATGTGCGACACCAAGGGGGTCATCTACAAGGGGAGAGTGGAGGGGATGAACAAGTACAAGGAGCGCTTCGCCGCC GACACCCCGCTGCGCACCCTGGAAGAGGCGGCGGTCGGCTGCGACGTCATGTATGGTCTCTCCTCCAAAGGGGCCATCAC CCAGGACATGGTGCGCAGCATGGCGGCCAACCCCATCATCTTCGCCATGGCGAATCCGGACCCCGAGATCACCCCGGAAG AGGCGCACGCGGTCCGCGGCGACGTACTCATCGCCACCGGGCGCTCCGACTATCCGAACCAGGTCAACAACGTGCTGGGC TTCCCGTTCATCTTCCGCGGCGCGCTCGACGTGCGGGCCACCACCATCAACGAAGAGATGAAAAAGGCGGCAGTCTTCGC CCTGGCGGAACTCGCCCGCGAGGAATGCCCCGACTCCGTCTGCCGCGCCTATGGCGACGTCAAGTTCAGCTTCGGCCGCG ATTACATCATCCCCAAACCCTTCGACCCCCGGGCGCTGTTGCGGGTCGCCCCGGCCATAGCCAAGGCGGCAATGGAGACG GGGGTGGCGCGCCAGCCCATCGCGGACATGAACAAGTACGTGGAGCATCTGGAGTCGCTGCAGGGCAAATCCAAGGAGAC GCTGCGCCAGATCATCAACAAGGCCAAATGCGATCCGAAGACCGTGGTCTTCCCCGAGGGCGAAAACGACAAGGTGCTGC GCGCAGCGCAGATGCTGGTCGAGCAGGGGATCGCGCGGCCGATCCTTCTGGGGAACGAAGACAAGATCCGCTGCACCCTG AAACATCTCGACATCGACCTGAACGGCGGGGTCACCATCATCGACCCGGCCACCTCGGAACACTCCGAATCGTACGCCAG CGAACTCTTCCTGCTCAGGCAGAGAAAGGGGCTCACCCTCTCCGAGGCCCGCAGGCTCATCAGCCGCAAGTCGCGCACCC ACTTCGGCTGCATGATGGTGCGCCGCGGCCACGCCGACGCCCTTTTGGCCGGGGTCGACGCCAACTACGCCGACACCATC CGCCCCGCGCTGCAGGTGATCGGCAAACAGGAAGGGCTCTCCAGCGTGCACGGCCTCTACATGATGGTCTTCAAGAAGGA CATCTTCTTCCTGGCCGACACCACCGTCTGCATCGATCCGGATGCTGCGGAGCTGGCCGAGACGGCGATCCTCGCGGCGG ACAAGGCGGCCATGCTCGGCATCGACCCGAGCGTCGCCATGCTCTCCATGTCCAACTTCGGCTCGGTGCGGCATCCGCAG GCCGACCGGGTGAGAAGCGCCGTGGAGATGGTGAAAAAGAGGGCGCCCGGGCTCGACATCGACGGGGAGATGCAGGCGGA TACCGCCGTCGTTTCCGAGATGCTGCAGGCGAATTTCCCCTTCACGACACTGAAAAAAGCTGCTAATGTCCTGGTCTTCC CGGACCTTACTTCGGGGAACATCTGCTACAAGCTCCTGCGGCAGTTGGGCGGCGCCGACGCCATCGGTCCCATCCTCATG GGGATGAACAAGCCGGTGCACATCCTGCAGCAGGGGGACGACGTCATGGACATAGTCAACATGGCGGCCATCGCCGTGGT GGACGCGCAGACCTGCGGCAAGTCGGCCACCGTAGCCGACGCGCCGGAAAAGAAGGCGCCGCGCCCGGCGCAGTTCACGG GCGCCTACGCCGGAGCCTGA
Upstream 100 bases:
>100_bases CCGGGGGGAGGAGTAGCGGAGATCGTCGTCAATTGTCAATTATCAATTGTCAATTGCCGTTGGTTATCAATTGTCAATTG CCTTTGGAGGGTTCGCCGAT
Downstream 100 bases:
>100_bases GGAGGCGTCCATGATGCCCGCGCACGAGCCGATGAGACCAGCCGCCGTCGCCGGCCACTACAGCTCCCCCGACCTGGAAT CCAGGGTGCTGGCGGCGCTG
Product: malic enzyme
Products: NA
Alternate protein names: NADP-ME [H]
Number of amino acids: Translated: 779; Mature: 779
Protein sequence:
>779_residues MKKMSDALEYHATGRKGKIEVIATKPCQTAQDLSLAYSPGVAEPCLAIEQNPEDAYQYTAKGNLVAVVSNGTAVLGLGNI GALAGKPVMEGKGVLFKRFADVDVFDIELNSEDPDEIIKACQLLEPTFGGINLEDIKAPECFYIEEELKKTMNIPVFHDD QHGTAIISAAGLINALELVGKKIEDVKIVVNGAGASANACANLAISLGLKLENLIMCDTKGVIYKGRVEGMNKYKERFAA DTPLRTLEEAAVGCDVMYGLSSKGAITQDMVRSMAANPIIFAMANPDPEITPEEAHAVRGDVLIATGRSDYPNQVNNVLG FPFIFRGALDVRATTINEEMKKAAVFALAELAREECPDSVCRAYGDVKFSFGRDYIIPKPFDPRALLRVAPAIAKAAMET GVARQPIADMNKYVEHLESLQGKSKETLRQIINKAKCDPKTVVFPEGENDKVLRAAQMLVEQGIARPILLGNEDKIRCTL KHLDIDLNGGVTIIDPATSEHSESYASELFLLRQRKGLTLSEARRLISRKSRTHFGCMMVRRGHADALLAGVDANYADTI RPALQVIGKQEGLSSVHGLYMMVFKKDIFFLADTTVCIDPDAAELAETAILAADKAAMLGIDPSVAMLSMSNFGSVRHPQ ADRVRSAVEMVKKRAPGLDIDGEMQADTAVVSEMLQANFPFTTLKKAANVLVFPDLTSGNICYKLLRQLGGADAIGPILM GMNKPVHILQQGDDVMDIVNMAAIAVVDAQTCGKSATVADAPEKKAPRPAQFTGAYAGA
Sequences:
>Translated_779_residues MKKMSDALEYHATGRKGKIEVIATKPCQTAQDLSLAYSPGVAEPCLAIEQNPEDAYQYTAKGNLVAVVSNGTAVLGLGNI GALAGKPVMEGKGVLFKRFADVDVFDIELNSEDPDEIIKACQLLEPTFGGINLEDIKAPECFYIEEELKKTMNIPVFHDD QHGTAIISAAGLINALELVGKKIEDVKIVVNGAGASANACANLAISLGLKLENLIMCDTKGVIYKGRVEGMNKYKERFAA DTPLRTLEEAAVGCDVMYGLSSKGAITQDMVRSMAANPIIFAMANPDPEITPEEAHAVRGDVLIATGRSDYPNQVNNVLG FPFIFRGALDVRATTINEEMKKAAVFALAELAREECPDSVCRAYGDVKFSFGRDYIIPKPFDPRALLRVAPAIAKAAMET GVARQPIADMNKYVEHLESLQGKSKETLRQIINKAKCDPKTVVFPEGENDKVLRAAQMLVEQGIARPILLGNEDKIRCTL KHLDIDLNGGVTIIDPATSEHSESYASELFLLRQRKGLTLSEARRLISRKSRTHFGCMMVRRGHADALLAGVDANYADTI RPALQVIGKQEGLSSVHGLYMMVFKKDIFFLADTTVCIDPDAAELAETAILAADKAAMLGIDPSVAMLSMSNFGSVRHPQ ADRVRSAVEMVKKRAPGLDIDGEMQADTAVVSEMLQANFPFTTLKKAANVLVFPDLTSGNICYKLLRQLGGADAIGPILM GMNKPVHILQQGDDVMDIVNMAAIAVVDAQTCGKSATVADAPEKKAPRPAQFTGAYAGA >Mature_779_residues MKKMSDALEYHATGRKGKIEVIATKPCQTAQDLSLAYSPGVAEPCLAIEQNPEDAYQYTAKGNLVAVVSNGTAVLGLGNI GALAGKPVMEGKGVLFKRFADVDVFDIELNSEDPDEIIKACQLLEPTFGGINLEDIKAPECFYIEEELKKTMNIPVFHDD QHGTAIISAAGLINALELVGKKIEDVKIVVNGAGASANACANLAISLGLKLENLIMCDTKGVIYKGRVEGMNKYKERFAA DTPLRTLEEAAVGCDVMYGLSSKGAITQDMVRSMAANPIIFAMANPDPEITPEEAHAVRGDVLIATGRSDYPNQVNNVLG FPFIFRGALDVRATTINEEMKKAAVFALAELAREECPDSVCRAYGDVKFSFGRDYIIPKPFDPRALLRVAPAIAKAAMET GVARQPIADMNKYVEHLESLQGKSKETLRQIINKAKCDPKTVVFPEGENDKVLRAAQMLVEQGIARPILLGNEDKIRCTL KHLDIDLNGGVTIIDPATSEHSESYASELFLLRQRKGLTLSEARRLISRKSRTHFGCMMVRRGHADALLAGVDANYADTI RPALQVIGKQEGLSSVHGLYMMVFKKDIFFLADTTVCIDPDAAELAETAILAADKAAMLGIDPSVAMLSMSNFGSVRHPQ ADRVRSAVEMVKKRAPGLDIDGEMQADTAVVSEMLQANFPFTTLKKAANVLVFPDLTSGNICYKLLRQLGGADAIGPILM GMNKPVHILQQGDDVMDIVNMAAIAVVDAQTCGKSATVADAPEKKAPRPAQFTGAYAGA
Specific function: Unknown
COG id: COG0281
COG function: function code C; Malic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the phosphate acetyltransferase and butyryltransferase family [H]
Homologues:
Organism=Homo sapiens, GI62420882, Length=324, Percent_Identity=29.6296296296296, Blast_Score=88, Evalue=4e-17, Organism=Homo sapiens, GI62420880, Length=324, Percent_Identity=29.6296296296296, Blast_Score=88, Evalue=4e-17, Organism=Homo sapiens, GI239049447, Length=324, Percent_Identity=29.6296296296296, Blast_Score=88, Evalue=4e-17, Organism=Homo sapiens, GI4505143, Length=345, Percent_Identity=28.4057971014493, Blast_Score=79, Evalue=2e-14, Organism=Homo sapiens, GI4505145, Length=319, Percent_Identity=29.4670846394984, Blast_Score=70, Evalue=6e-12, Organism=Homo sapiens, GI270265879, Length=320, Percent_Identity=29.375, Blast_Score=70, Evalue=9e-12, Organism=Escherichia coli, GI1788806, Length=750, Percent_Identity=52.2666666666667, Blast_Score=760, Evalue=0.0, Organism=Escherichia coli, GI1788635, Length=343, Percent_Identity=34.402332361516, Blast_Score=197, Evalue=2e-51, Organism=Escherichia coli, GI1788800, Length=318, Percent_Identity=36.7924528301887, Blast_Score=190, Evalue=2e-49, Organism=Caenorhabditis elegans, GI17537199, Length=424, Percent_Identity=26.1792452830189, Blast_Score=79, Evalue=8e-15, Organism=Saccharomyces cerevisiae, GI6322823, Length=268, Percent_Identity=28.7313432835821, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI24646388, Length=353, Percent_Identity=30.028328611898, Blast_Score=98, Evalue=2e-20, Organism=Drosophila melanogaster, GI24646386, Length=350, Percent_Identity=29.7142857142857, Blast_Score=98, Evalue=3e-20, Organism=Drosophila melanogaster, GI78707242, Length=407, Percent_Identity=27.027027027027, Blast_Score=86, Evalue=1e-16, Organism=Drosophila melanogaster, GI78707238, Length=407, Percent_Identity=27.027027027027, Blast_Score=86, Evalue=1e-16, Organism=Drosophila melanogaster, GI21356279, Length=396, Percent_Identity=26.2626262626263, Blast_Score=83, Evalue=7e-16, Organism=Drosophila melanogaster, GI281362672, Length=396, Percent_Identity=26.2626262626263, Blast_Score=83, Evalue=7e-16, Organism=Drosophila melanogaster, GI281362674, Length=396, Percent_Identity=26.2626262626263, Blast_Score=83, Evalue=7e-16, Organism=Drosophila melanogaster, GI78707240, Length=345, Percent_Identity=27.8260869565217, Blast_Score=81, Evalue=3e-15, Organism=Drosophila melanogaster, GI78707232, Length=376, Percent_Identity=25, Blast_Score=69, Evalue=2e-11, Organism=Drosophila melanogaster, GI281363503, Length=376, Percent_Identity=25, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI281363505, Length=376, Percent_Identity=25, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI78707236, Length=376, Percent_Identity=25, Blast_Score=68, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015884 - InterPro: IPR012301 - InterPro: IPR012302 - InterPro: IPR012188 - InterPro: IPR016040 - InterPro: IPR002505 [H]
Pfam domain/function: PF00390 malic; PF03949 Malic_M; PF01515 PTA_PTB [H]
EC number: =1.1.1.40 [H]
Molecular weight: Translated: 83976; Mature: 83976
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: PS00331 MALIC_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKMSDALEYHATGRKGKIEVIATKPCQTAQDLSLAYSPGVAEPCLAIEQNPEDAYQYTA CCCHHHHHHHHCCCCCCEEEEEEECCCCCHHHCCEEECCCCCCCCCEECCCCHHHHEEEC KGNLVAVVSNGTAVLGLGNIGALAGKPVMEGKGVLFKRFADVDVFDIELNSEDPDEIIKA CCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCEEEEEEECCCCHHHHHHH CQLLEPTFGGINLEDIKAPECFYIEEELKKTMNIPVFHDDQHGTAIISAAGLINALELVG HHHHCCCCCCCCHHHCCCCCEEEEHHHHHHHCCCCEEECCCCCCEEEHHHHHHHHHHHHC KKIEDVKIVVNGAGASANACANLAISLGLKLENLIMCDTKGVIYKGRVEGMNKYKERFAA CCCCEEEEEEECCCCCCHHHHHHHHHCCCEECEEEEECCCCCEEECHHHHHHHHHHHHCC DTPLRTLEEAAVGCDVMYGLSSKGAITQDMVRSMAANPIIFAMANPDPEITPEEAHAVRG CCCHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHCCC DVLIATGRSDYPNQVNNVLGFPFIFRGALDVRATTINEEMKKAAVFALAELAREECPDSV CEEEEECCCCCCHHHHHHCCCHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCHHH CRAYGDVKFSFGRDYIIPKPFDPRALLRVAPAIAKAAMETGVARQPIADMNKYVEHLESL HHHHCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH QGKSKETLRQIINKAKCDPKTVVFPEGENDKVLRAAQMLVEQGIARPILLGNEDKIRCTL CCCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCEEECCCCCEEEEE KHLDIDLNGGVTIIDPATSEHSESYASELFLLRQRKGLTLSEARRLISRKSRTHFGCMMV EEEEEEECCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHEEEEE RRGHADALLAGVDANYADTIRPALQVIGKQEGLSSVHGLYMMVFKKDIFFLADTTVCIDP ECCCCCEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCEEEEECCEEEECC DAAELAETAILAADKAAMLGIDPSVAMLSMSNFGSVRHPQADRVRSAVEMVKKRAPGLDI CHHHHHHHHHHHCCCHHEECCCCCHHEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCC DGEMQADTAVVSEMLQANFPFTTLKKAANVLVFPDLTSGNICYKLLRQLGGADAIGPILM CCCCCHHHHHHHHHHHCCCCHHHHHHHCCEEEECCCCCCHHHHHHHHHHCCCCCHHHHHH GMNKPVHILQQGDDVMDIVNMAAIAVVDAQTCGKSATVADAPEKKAPRPAQFTGAYAGA CCCCCEEEECCCCHHHHHHHHHHHHEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKKMSDALEYHATGRKGKIEVIATKPCQTAQDLSLAYSPGVAEPCLAIEQNPEDAYQYTA CCCHHHHHHHHCCCCCCEEEEEEECCCCCHHHCCEEECCCCCCCCCEECCCCHHHHEEEC KGNLVAVVSNGTAVLGLGNIGALAGKPVMEGKGVLFKRFADVDVFDIELNSEDPDEIIKA CCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCEEEEEEECCCCHHHHHHH CQLLEPTFGGINLEDIKAPECFYIEEELKKTMNIPVFHDDQHGTAIISAAGLINALELVG HHHHCCCCCCCCHHHCCCCCEEEEHHHHHHHCCCCEEECCCCCCEEEHHHHHHHHHHHHC KKIEDVKIVVNGAGASANACANLAISLGLKLENLIMCDTKGVIYKGRVEGMNKYKERFAA CCCCEEEEEEECCCCCCHHHHHHHHHCCCEECEEEEECCCCCEEECHHHHHHHHHHHHCC DTPLRTLEEAAVGCDVMYGLSSKGAITQDMVRSMAANPIIFAMANPDPEITPEEAHAVRG CCCHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHCCC DVLIATGRSDYPNQVNNVLGFPFIFRGALDVRATTINEEMKKAAVFALAELAREECPDSV CEEEEECCCCCCHHHHHHCCCHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCHHH CRAYGDVKFSFGRDYIIPKPFDPRALLRVAPAIAKAAMETGVARQPIADMNKYVEHLESL HHHHCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH QGKSKETLRQIINKAKCDPKTVVFPEGENDKVLRAAQMLVEQGIARPILLGNEDKIRCTL CCCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCEEECCCCCEEEEE KHLDIDLNGGVTIIDPATSEHSESYASELFLLRQRKGLTLSEARRLISRKSRTHFGCMMV EEEEEEECCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHEEEEE RRGHADALLAGVDANYADTIRPALQVIGKQEGLSSVHGLYMMVFKKDIFFLADTTVCIDP ECCCCCEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCEEEEECCEEEECC DAAELAETAILAADKAAMLGIDPSVAMLSMSNFGSVRHPQADRVRSAVEMVKKRAPGLDI CHHHHHHHHHHHCCCHHEECCCCCHHEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCC DGEMQADTAVVSEMLQANFPFTTLKKAANVLVFPDLTSGNICYKLLRQLGGADAIGPILM CCCCCHHHHHHHHHHHCCCCHHHHHHHCCEEEECCCCCCHHHHHHHHHHCCCCCHHHHHH GMNKPVHILQQGDDVMDIVNMAAIAVVDAQTCGKSATVADAPEKKAPRPAQFTGAYAGA CCCCCEEEECCCCHHHHHHHHHHHHEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 36376 [H]