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The map label for this gene is bamL [H]

Identifier: 197117824

GI number: 197117824

Start: 1659572

End: 1660339

Strand: Direct

Name: bamL [H]

Synonym: Gbem_1437

Alternate gene names: 197117824

Gene position: 1659572-1660339 (Clockwise)

Preceding gene: 197117823

Following gene: 197117825

Centisome position: 35.96

GC content: 62.89

Gene sequence:

>768_bases
ATGGCTTCTGTTTATCGTTACGAAAAAGGGGCCGTTACCGCAGCTGAGAGGGAAGTGGTGGCCGAGGTCCCCGTGGTTCT
GCACGTGAACGGCAGGGAGCTTGCCACCCTGATCGCCTCCCCCCACGAGCTCCGTTTCCTGGTTGCCGGGTTTCTCAGGC
TGCAGGGGCTCGTGGACCGGGTCGAGGATTTCAACGCCCTCTCGGTCTGCGACGATCACGGCATCGCCAGCGCCCAGGTT
AAAAAGGAGCTTCCGGAAAAGCTGAAGCCTGTCCTCACCTCCGGTTGCGGCACCGGCATTAGTTTTTCCGTCCCTAGGGT
CGATGCCGCGCAAAGCGCCGTAGAAAACGGGAAAACCTACACCCCCGCCGCCGTCTTCTCCATGATGGACGGGCTGGCCC
GGAAGGCGCAGGGGTACCAGGCCCACGGCGGCATGTACTCGGCCGCGGTAGGCGACGGAGACGTCGTACTCTTTTCCGAG
GACCTCGGGCGCCATAATACTATCGACCGCATCGCGGGAGAGGCGCTCATGAAGGGAATAGACCTCTCAGGGATGATGCT
GGTCACCTCGGGGCGCGTCTCCACCGAACTGATCGCCAAGGCGGCGCTTTTGGGGATCACGGTTGTCGCCTCGCGCACTT
CACCCACCGGGACCGCCGTGAAAATGGCCGAGGAAGCGGGGATCACCATGATCGGCTACGTGCGGGCGGACCGCTTCGAT
GTCTACAGCCATCCGGAGCGGATCGACTTGGCAGCGGTTGCCAGCTGA

Upstream 100 bases:

>100_bases
GGGATCCGCCGCATCGTCCACGACAAGCCAGGCCGTCACCGGTTCGACGAGGAAGCCGGCGTCGTAGCGCCCTTCGTCAT
GGCAGGGATAGGGGGATAGG

Downstream 100 bases:

>100_bases
CCCAGCCCGTGCTGTATGTATTGACGGAAACGCCGGATTTCATGTATACAAATGACTCCTAATGGCATCAAAAGCAGTCC
GATTCCAGCGCTCCCCCTCC

Product: formate dehydrogenase accessory protein FdhD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 254

Protein sequence:

>255_residues
MASVYRYEKGAVTAAEREVVAEVPVVLHVNGRELATLIASPHELRFLVAGFLRLQGLVDRVEDFNALSVCDDHGIASAQV
KKELPEKLKPVLTSGCGTGISFSVPRVDAAQSAVENGKTYTPAAVFSMMDGLARKAQGYQAHGGMYSAAVGDGDVVLFSE
DLGRHNTIDRIAGEALMKGIDLSGMMLVTSGRVSTELIAKAALLGITVVASRTSPTGTAVKMAEEAGITMIGYVRADRFD
VYSHPERIDLAAVAS

Sequences:

>Translated_255_residues
MASVYRYEKGAVTAAEREVVAEVPVVLHVNGRELATLIASPHELRFLVAGFLRLQGLVDRVEDFNALSVCDDHGIASAQV
KKELPEKLKPVLTSGCGTGISFSVPRVDAAQSAVENGKTYTPAAVFSMMDGLARKAQGYQAHGGMYSAAVGDGDVVLFSE
DLGRHNTIDRIAGEALMKGIDLSGMMLVTSGRVSTELIAKAALLGITVVASRTSPTGTAVKMAEEAGITMIGYVRADRFD
VYSHPERIDLAAVAS
>Mature_254_residues
ASVYRYEKGAVTAAEREVVAEVPVVLHVNGRELATLIASPHELRFLVAGFLRLQGLVDRVEDFNALSVCDDHGIASAQVK
KELPEKLKPVLTSGCGTGISFSVPRVDAAQSAVENGKTYTPAAVFSMMDGLARKAQGYQAHGGMYSAAVGDGDVVLFSED
LGRHNTIDRIAGEALMKGIDLSGMMLVTSGRVSTELIAKAALLGITVVASRTSPTGTAVKMAEEAGITMIGYVRADRFDV
YSHPERIDLAAVAS

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=249, Percent_Identity=25.7028112449799, Blast_Score=86, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 26954; Mature: 26823

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASVYRYEKGAVTAAEREVVAEVPVVLHVNGRELATLIASPHELRFLVAGFLRLQGLVDR
CCCCEEECCCCCCHHHHHHHHHCCEEEEECCHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
VEDFNALSVCDDHGIASAQVKKELPEKLKPVLTSGCGTGISFSVPRVDAAQSAVENGKTY
HHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHCCCCC
TPAAVFSMMDGLARKAQGYQAHGGMYSAAVGDGDVVLFSEDLGRHNTIDRIAGEALMKGI
CHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHCC
DLSGMMLVTSGRVSTELIAKAALLGITVVASRTSPTGTAVKMAEEAGITMIGYVRADRFD
CCCCEEEEECCCHHHHHHHHHHHHHHEEEEECCCCCCHHEEEHHHCCCEEEEEEECCCEE
VYSHPERIDLAAVAS
CCCCCCCCCEEEECC
>Mature Secondary Structure 
ASVYRYEKGAVTAAEREVVAEVPVVLHVNGRELATLIASPHELRFLVAGFLRLQGLVDR
CCCEEECCCCCCHHHHHHHHHCCEEEEECCHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
VEDFNALSVCDDHGIASAQVKKELPEKLKPVLTSGCGTGISFSVPRVDAAQSAVENGKTY
HHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHCCCCC
TPAAVFSMMDGLARKAQGYQAHGGMYSAAVGDGDVVLFSEDLGRHNTIDRIAGEALMKGI
CHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHCC
DLSGMMLVTSGRVSTELIAKAALLGITVVASRTSPTGTAVKMAEEAGITMIGYVRADRFD
CCCCEEEEECCCHHHHHHHHHHHHHHEEEEECCCCCCHHEEEHHHCCCEEEEEEECCCEE
VYSHPERIDLAAVAS
CCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA