Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197117788

Identifier: 197117788

GI number: 197117788

Start: 1614340

End: 1614795

Strand: Direct

Name: 197117788

Synonym: Gbem_1400

Alternate gene names: NA

Gene position: 1614340-1614795 (Clockwise)

Preceding gene: 197117786

Following gene: 197117795

Centisome position: 34.98

GC content: 53.51

Gene sequence:

>456_bases
ATGTCAGGAACAAGAATGGGGCGTTTGGTACGTGGGACGATTGCTGCAGGTGCAGTGCTGGTGGGGTCTGTGGCTTTCTT
CGGCTGCTCCAAAGTCGAGACGGCGAAGATCGAGGGCGGCGTCGTCACCATACCCGTTGCCAAAGTGACTGAGCAAGCGA
AGTTCTACAAATACGTCGATAACGGGAAAGAGATCAGTTATTTCGTGGCCAAAGCCCCGGACGGAAGTTACAAAGCCGCT
TTTAACGCCTGTGATTCCTGCTTTCGCGAAAAGAAAGGGTATGAACAGCAAGGCAGCGTGATGAACTGCATAAACTGCAA
CCAGAAGTTCGCCATCGACCGTCTTGGTCCCAACGCCACTGGCGGCTGCAACCCCGGTTATCTCCCGATAGAGGTCAAAG
GCGATGCCATTACTATCCCGGAGAGCACCCTGAAGGGTGGGGCAAAATACTTCTAA

Upstream 100 bases:

>100_bases
AATCCTGAATTCGGATACTTAGAGGTAGCGACTCGTGCTGGCATGGTTGATGTAAGGTTTTGGGGGCCGCGAAAAAATAA
CGGGAATATAGGAGATCTTC

Downstream 100 bases:

>100_bases
ATAATCTGCATCGGCAGAGCCGGAACTATTTCCCGAATACCTTGCGCAGCAGCTCGGTTCCCCTGGCCGCCGGGTCGGTC
CGTATCTTCTTTTCCTCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MSGTRMGRLVRGTIAAGAVLVGSVAFFGCSKVETAKIEGGVVTIPVAKVTEQAKFYKYVDNGKEISYFVAKAPDGSYKAA
FNACDSCFREKKGYEQQGSVMNCINCNQKFAIDRLGPNATGGCNPGYLPIEVKGDAITIPESTLKGGAKYF

Sequences:

>Translated_151_residues
MSGTRMGRLVRGTIAAGAVLVGSVAFFGCSKVETAKIEGGVVTIPVAKVTEQAKFYKYVDNGKEISYFVAKAPDGSYKAA
FNACDSCFREKKGYEQQGSVMNCINCNQKFAIDRLGPNATGGCNPGYLPIEVKGDAITIPESTLKGGAKYF
>Mature_150_residues
SGTRMGRLVRGTIAAGAVLVGSVAFFGCSKVETAKIEGGVVTIPVAKVTEQAKFYKYVDNGKEISYFVAKAPDGSYKAAF
NACDSCFREKKGYEQQGSVMNCINCNQKFAIDRLGPNATGGCNPGYLPIEVKGDAITIPESTLKGGAKYF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16028; Mature: 15896

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGTRMGRLVRGTIAAGAVLVGSVAFFGCSKVETAKIEGGVVTIPVAKVTEQAKFYKYVD
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEHHHHHHHHHHHHHHC
NGKEISYFVAKAPDGSYKAAFNACDSCFREKKGYEQQGSVMNCINCNQKFAIDRLGPNAT
CCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEECCCCCCC
GGCNPGYLPIEVKGDAITIPESTLKGGAKYF
CCCCCCEEEEEECCCEEECCHHHHCCCCCCC
>Mature Secondary Structure 
SGTRMGRLVRGTIAAGAVLVGSVAFFGCSKVETAKIEGGVVTIPVAKVTEQAKFYKYVD
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEHHHHHHHHHHHHHHC
NGKEISYFVAKAPDGSYKAAFNACDSCFREKKGYEQQGSVMNCINCNQKFAIDRLGPNAT
CCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEECCCCCCC
GGCNPGYLPIEVKGDAITIPESTLKGGAKYF
CCCCCCEEEEEECCCEEECCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA