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The map label for this gene is fadF [H]

Identifier: 197117747

GI number: 197117747

Start: 1565795

End: 1567771

Strand: Direct

Name: fadF [H]

Synonym: Gbem_1359

Alternate gene names: 197117747

Gene position: 1565795-1567771 (Clockwise)

Preceding gene: 197117746

Following gene: 197117748

Centisome position: 33.93

GC content: 63.23

Gene sequence:

>1977_bases
ATGCAACCTGATCCTGTTATCTTTACGCCGCTTCTGGCTGCGGCCTGCACCATCTTCCTTTGGAGCTGCTACCGCCGTTT
CAGCCTGGTCACCGTCGGCGCCGCCGAGGACCGCTTCTCCAACACCTGGGACCGGTTGCAGGCGATGTTCGTCTACGCCT
TCTTGCAAAAGAGGGTGGTGAAGCGTCCCTTCGGCGTCAACCACGTGTTCATCTTCTGGTCCTTCCTGATCCTGGCCGTG
GCCAATACGGAATTCCTCATCTGCGGCGTCTTTCCGGCGGCGAAGCTTTCCCTGCTGCTCCCGGCGGCGCTCTACCAGCC
GCTACTGTTTGCGTTCGACCTGGTCTCGCTCTTCGCCCTGGGCGCCGTCGTCATCGCCCTGGTCCGCCGAGCGGTAGCCC
CGCCGTACAAAGGGGCGCGCACTGGTGAAGCGTTCGCCATCCTTTCCATGATCGGGACGCTGATGCTGGCCTATTTCGGC
TTTCATGCCGCGGAGATCGCTCTGGGCCACGAGCCCGCGGCTCACGTCATGCCGCTTTCCTCGTTGCTCGCCGCCGCTCT
CTCCAGCCTGAGCCCGGCAACGCTCGGCACCGTGGGGGTAGCTTCCTGGTGGCTCCACGCCGGGGTGCTTCTATTCTTCC
TCAACTACCTCCCCTACAGCAAGCACATGCACATCCTCGCCGCCATCCCCAACTGCTACTTCAAGGGGCTCGGTACGCCC
AACACCCAGGCGCGGGAGGAGTTCGCCGAAGGAAACGTCTACGGCGCAGGGAGCATCGAAAACTTCACCTGGAAGGACCT
CTTCGATTCCTTCTCCTGCACCGAGTGCGGCCGCTGCGAAAACGCCTGTCCCGCGGCCGCTACAGGGAAACCGCTCAACC
CGCGCCTTGTAATGCATGACATCAAGGTGAACCTCCTGGCCAACGGCGCGCAGCTGCAGCGCGGCGGCGTGGCGACGGTT
CCGGTGATCGGGGAAGGGGAGGGGAGCGTGGAAGTCGACGCCCTCTGGTCCTGCACCACCTGCGGCGCCTGCCTTAACGC
CTGCCCGGTCTTCATCGAGCAGATGCCCAAGATCAACAAGATGCGCCGGCACCTGGTCCAGATGGAGGCGGATTTCCCCG
AGGAGCTTTTGAACCTCTTCGAGAACATGGAACAGCGCTCCAACCCGTGGGGGATCGCCCCCGGCGACCGCGGCAAATGG
GTCGGCGGCCACGAAGTAAAACCGTTCGAGGCGGGCCAGACCGAATACCTCTTCTACGTCGGCTGCGCCGGCTCCTTCGA
CTCCCGCGCCAAGCAGGTGACCCTTTCCATGGCGCGGATCCTCGACGCCGCTGGCATTTCCTGGGGAATCCTCGGCAAGG
AAGAGAAGTGCTGCGGCGACAGCGTGCGCAGGCTGGGTAACGAATATGTCTTCGACAAGATGGCGCGCGAGAACGTGGCC
ATGTTCCAGGAGAAGAAGGTGACCAAGGTGATCACCCAGTGTCCGCACTGCTTCAGCACCCTCAAAAACGATTACCGGCA
GTACGGCCTGGAACTGGAGGTCATCCCGCACGCCGAGCTGATCGAGCAGTTGCTGGGGGAAGGGAAGTTGCAGCTTGATA
TGCACGAGGCCACGGGCGGGAACATCGTCTTCCACGACTCCTGCTACCTCGGGCGCCATAACGGCGTCTACGAGGCGCCG
CGTAAGGTCATCGCCCAGGCGACCGGTACCGCCCCCGCGGAGATGCCGAGAAACCGCGAGAATTCCTTCTGCTGCGGCGC
CGGCGGCGGCCGCATGTGGCTTGAAGAGCACCTGGGGGAGAGGATCAACCTGAACCGCGTCAACGAGGCGCTGGCCGGAT
CCCCCGGCACCATCTGCGTCACCTGCCCGTACTGCATGACCATGATGGAAGACGGCCTCAAGGACCGCGCCAGCGGGCAG
ACCAAGGTGAAGGACATCGCGGAAATCGTTGCAGAGGGATTGAAAGGTAGGGCTTAG

Upstream 100 bases:

>100_bases
GGCGGATGAGGGATTCGCCCCGGCGTAAGCGTGAGCACCGCCCTCACCCTGACCCTCTCCCGGAGGGAGAGGGGACTTAA
CTTCGAGAAGGGATATTACT

Downstream 100 bases:

>100_bases
ACGCTCGAAGGATTGAATCAGAGGAAGATCACCATGCGACAATGTACCGCTGCCGCGTTTTCCCAATTCCAGGCAACAGA
GCCCGCTTTCCTGGAGTACC

Product: iron-sulfur cluster-binding oxidoreductase lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 658; Mature: 658

Protein sequence:

>658_residues
MQPDPVIFTPLLAAACTIFLWSCYRRFSLVTVGAAEDRFSNTWDRLQAMFVYAFLQKRVVKRPFGVNHVFIFWSFLILAV
ANTEFLICGVFPAAKLSLLLPAALYQPLLFAFDLVSLFALGAVVIALVRRAVAPPYKGARTGEAFAILSMIGTLMLAYFG
FHAAEIALGHEPAAHVMPLSSLLAAALSSLSPATLGTVGVASWWLHAGVLLFFLNYLPYSKHMHILAAIPNCYFKGLGTP
NTQAREEFAEGNVYGAGSIENFTWKDLFDSFSCTECGRCENACPAAATGKPLNPRLVMHDIKVNLLANGAQLQRGGVATV
PVIGEGEGSVEVDALWSCTTCGACLNACPVFIEQMPKINKMRRHLVQMEADFPEELLNLFENMEQRSNPWGIAPGDRGKW
VGGHEVKPFEAGQTEYLFYVGCAGSFDSRAKQVTLSMARILDAAGISWGILGKEEKCCGDSVRRLGNEYVFDKMARENVA
MFQEKKVTKVITQCPHCFSTLKNDYRQYGLELEVIPHAELIEQLLGEGKLQLDMHEATGGNIVFHDSCYLGRHNGVYEAP
RKVIAQATGTAPAEMPRNRENSFCCGAGGGRMWLEEHLGERINLNRVNEALAGSPGTICVTCPYCMTMMEDGLKDRASGQ
TKVKDIAEIVAEGLKGRA

Sequences:

>Translated_658_residues
MQPDPVIFTPLLAAACTIFLWSCYRRFSLVTVGAAEDRFSNTWDRLQAMFVYAFLQKRVVKRPFGVNHVFIFWSFLILAV
ANTEFLICGVFPAAKLSLLLPAALYQPLLFAFDLVSLFALGAVVIALVRRAVAPPYKGARTGEAFAILSMIGTLMLAYFG
FHAAEIALGHEPAAHVMPLSSLLAAALSSLSPATLGTVGVASWWLHAGVLLFFLNYLPYSKHMHILAAIPNCYFKGLGTP
NTQAREEFAEGNVYGAGSIENFTWKDLFDSFSCTECGRCENACPAAATGKPLNPRLVMHDIKVNLLANGAQLQRGGVATV
PVIGEGEGSVEVDALWSCTTCGACLNACPVFIEQMPKINKMRRHLVQMEADFPEELLNLFENMEQRSNPWGIAPGDRGKW
VGGHEVKPFEAGQTEYLFYVGCAGSFDSRAKQVTLSMARILDAAGISWGILGKEEKCCGDSVRRLGNEYVFDKMARENVA
MFQEKKVTKVITQCPHCFSTLKNDYRQYGLELEVIPHAELIEQLLGEGKLQLDMHEATGGNIVFHDSCYLGRHNGVYEAP
RKVIAQATGTAPAEMPRNRENSFCCGAGGGRMWLEEHLGERINLNRVNEALAGSPGTICVTCPYCMTMMEDGLKDRASGQ
TKVKDIAEIVAEGLKGRA
>Mature_658_residues
MQPDPVIFTPLLAAACTIFLWSCYRRFSLVTVGAAEDRFSNTWDRLQAMFVYAFLQKRVVKRPFGVNHVFIFWSFLILAV
ANTEFLICGVFPAAKLSLLLPAALYQPLLFAFDLVSLFALGAVVIALVRRAVAPPYKGARTGEAFAILSMIGTLMLAYFG
FHAAEIALGHEPAAHVMPLSSLLAAALSSLSPATLGTVGVASWWLHAGVLLFFLNYLPYSKHMHILAAIPNCYFKGLGTP
NTQAREEFAEGNVYGAGSIENFTWKDLFDSFSCTECGRCENACPAAATGKPLNPRLVMHDIKVNLLANGAQLQRGGVATV
PVIGEGEGSVEVDALWSCTTCGACLNACPVFIEQMPKINKMRRHLVQMEADFPEELLNLFENMEQRSNPWGIAPGDRGKW
VGGHEVKPFEAGQTEYLFYVGCAGSFDSRAKQVTLSMARILDAAGISWGILGKEEKCCGDSVRRLGNEYVFDKMARENVA
MFQEKKVTKVITQCPHCFSTLKNDYRQYGLELEVIPHAELIEQLLGEGKLQLDMHEATGGNIVFHDSCYLGRHNGVYEAP
RKVIAQATGTAPAEMPRNRENSFCCGAGGGRMWLEEHLGERINLNRVNEALAGSPGTICVTCPYCMTMMEDGLKDRASGQ
TKVKDIAEIVAEGLKGRA

Specific function: Unknown

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 72086; Mature: 72086

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPDPVIFTPLLAAACTIFLWSCYRRFSLVTVGAAEDRFSNTWDRLQAMFVYAFLQKRVV
CCCCCEEHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
KRPFGVNHVFIFWSFLILAVANTEFLICGVFPAAKLSLLLPAALYQPLLFAFDLVSLFAL
HCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAVVIALVRRAVAPPYKGARTGEAFAILSMIGTLMLAYFGFHAAEIALGHEPAAHVMPLS
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
SLLAAALSSLSPATLGTVGVASWWLHAGVLLFFLNYLPYSKHMHILAAIPNCYFKGLGTP
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEECCHHHHCCCCCC
NTQAREEFAEGNVYGAGSIENFTWKDLFDSFSCTECGRCENACPAAATGKPLNPRLVMHD
CHHHHHHHHCCCEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
IKVNLLANGAQLQRGGVATVPVIGEGEGSVEVDALWSCTTCGACLNACPVFIEQMPKINK
EEEEEEECCCCCCCCCEEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHH
MRRHLVQMEADFPEELLNLFENMEQRSNPWGIAPGDRGKWVGGHEVKPFEAGQTEYLFYV
HHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
GCAGSFDSRAKQVTLSMARILDAAGISWGILGKEEKCCGDSVRRLGNEYVFDKMARENVA
ECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHH
MFQEKKVTKVITQCPHCFSTLKNDYRQYGLELEVIPHAELIEQLLGEGKLQLDMHEATGG
HHHHHHHHHHHHHCHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHCCCCEEEEEEECCCC
NIVFHDSCYLGRHNGVYEAPRKVIAQATGTAPAEMPRNRENSFCCGAGGGRMWLEEHLGE
CEEEECCEEECCCCCHHHHHHHHHHHHCCCCCHHCCCCCCCCEEECCCCCCHHHHHHCCC
RINLNRVNEALAGSPGTICVTCPYCMTMMEDGLKDRASGQTKVKDIAEIVAEGLKGRA
CCCHHHHHHHHCCCCCCEEEECHHHHHHHHHCHHHHCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQPDPVIFTPLLAAACTIFLWSCYRRFSLVTVGAAEDRFSNTWDRLQAMFVYAFLQKRVV
CCCCCEEHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
KRPFGVNHVFIFWSFLILAVANTEFLICGVFPAAKLSLLLPAALYQPLLFAFDLVSLFAL
HCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAVVIALVRRAVAPPYKGARTGEAFAILSMIGTLMLAYFGFHAAEIALGHEPAAHVMPLS
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
SLLAAALSSLSPATLGTVGVASWWLHAGVLLFFLNYLPYSKHMHILAAIPNCYFKGLGTP
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEECCHHHHCCCCCC
NTQAREEFAEGNVYGAGSIENFTWKDLFDSFSCTECGRCENACPAAATGKPLNPRLVMHD
CHHHHHHHHCCCEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
IKVNLLANGAQLQRGGVATVPVIGEGEGSVEVDALWSCTTCGACLNACPVFIEQMPKINK
EEEEEEECCCCCCCCCEEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHH
MRRHLVQMEADFPEELLNLFENMEQRSNPWGIAPGDRGKWVGGHEVKPFEAGQTEYLFYV
HHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
GCAGSFDSRAKQVTLSMARILDAAGISWGILGKEEKCCGDSVRRLGNEYVFDKMARENVA
ECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHH
MFQEKKVTKVITQCPHCFSTLKNDYRQYGLELEVIPHAELIEQLLGEGKLQLDMHEATGG
HHHHHHHHHHHHHCHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHCCCCEEEEEEECCCC
NIVFHDSCYLGRHNGVYEAPRKVIAQATGTAPAEMPRNRENSFCCGAGGGRMWLEEHLGE
CEEEECCEEECCCCCHHHHHHHHHHHHCCCCCHHCCCCCCCCEEECCCCCCHHHHHHCCC
RINLNRVNEALAGSPGTICVTCPYCMTMMEDGLKDRASGQTKVKDIAEIVAEGLKGRA
CCCHHHHHHHHCCCCCCEEEECHHHHHHHHHCHHHHCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]