Click here to switch to the map view.

The map label for this gene is etfB-1 [H]

Identifier: 197117745

GI number: 197117745

Start: 1563323

End: 1564135

Strand: Direct

Name: etfB-1 [H]

Synonym: Gbem_1357

Alternate gene names: 197117745

Gene position: 1563323-1564135 (Clockwise)

Preceding gene: 197117744

Following gene: 197117746

Centisome position: 33.87

GC content: 63.96

Gene sequence:

>813_bases
ATGTACGTGGTTGCTTGCATTAAACAGGTTCCGGACACTACCCAGGTGCAGATCGATCCGGTGACCAACACGCTGGTGCG
CGACGGTATCCCCTTCATCATCAACCCCTACGATACGCACGCGCTGGAGGAGAGCCTGCGCATGAAGGGACGCTACGGCT
TCAAGGCCGCGGCTCTCTCCATGGGCCCGCCCAACGCGGAAGCGGCCCTCAGAAAGGCGCTCGCGCTCGGCGTGGACGAA
GCCATCCTCCTTTCCGACCGCGCCTTCGGCGGCGCCGATACCCTTTCCACCAGCAACGTCCTCGCTGCCGCCATCAGCAA
GCTGGCGCAGGACGATGAGGTGGGGATCGTGTTCTGCGGCAAGCAGACCATTGACGGGGATACCGCGCAGGTCGGCCCGG
GCATTGCGATACGGCTCGGTTTTTCGCAGCTTACCCTGGTGGACCGCATCGAGCACCTGGATTTCCTGGCAAAGAAGATC
AGGGTCAGGCGCAAGCTGGAAGGGCGCTACGAGATCGTGGAAGCGAAACTCCCCGCCATGATCACCGTGGTGCGCGAACT
GAACCGCCCCCGCTACCCAACGGTGCCGATGCGCCTGAAGGCTTCCAAGGGCGAGGTGAGGGTCTGGGACAACAGCGAGC
TGAAGCTCGATCCCAACAGCATCGGGCTCAAGGGGTCGCCGACCTGGGTGAGCAGGATCTTCTCTCCCGAGCGGAGCAAG
GGCGAGATGCTCGGCGACGGCCTGAACGACCCGAAGGGGACCGCGCGCCTCCTGGTGGAGCGGCTTTTGGCCAGGGACAT
GCTGGCGGTGTAG

Upstream 100 bases:

>100_bases
TAAAAGCTTTGGTGGACCACATGGACTCTATGGACCTGGTGGACCCGATGGACGTGGCTGAGAGCAGATAAAAGTTAACT
GGAGAGAGAGGTTTTAGCCC

Downstream 100 bases:

>100_bases
TCACTAACAAACCTTGTGGACTGAATGGACGCCATGGACTTGGTGGATGTGATGGACGTGACCGAAAGTGGGGAGAATGA
TGAGTGAGGCAAAACCTAAA

Product: electron transfer flavoprotein subunit beta

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MYVVACIKQVPDTTQVQIDPVTNTLVRDGIPFIINPYDTHALEESLRMKGRYGFKAAALSMGPPNAEAALRKALALGVDE
AILLSDRAFGGADTLSTSNVLAAAISKLAQDDEVGIVFCGKQTIDGDTAQVGPGIAIRLGFSQLTLVDRIEHLDFLAKKI
RVRRKLEGRYEIVEAKLPAMITVVRELNRPRYPTVPMRLKASKGEVRVWDNSELKLDPNSIGLKGSPTWVSRIFSPERSK
GEMLGDGLNDPKGTARLLVERLLARDMLAV

Sequences:

>Translated_270_residues
MYVVACIKQVPDTTQVQIDPVTNTLVRDGIPFIINPYDTHALEESLRMKGRYGFKAAALSMGPPNAEAALRKALALGVDE
AILLSDRAFGGADTLSTSNVLAAAISKLAQDDEVGIVFCGKQTIDGDTAQVGPGIAIRLGFSQLTLVDRIEHLDFLAKKI
RVRRKLEGRYEIVEAKLPAMITVVRELNRPRYPTVPMRLKASKGEVRVWDNSELKLDPNSIGLKGSPTWVSRIFSPERSK
GEMLGDGLNDPKGTARLLVERLLARDMLAV
>Mature_270_residues
MYVVACIKQVPDTTQVQIDPVTNTLVRDGIPFIINPYDTHALEESLRMKGRYGFKAAALSMGPPNAEAALRKALALGVDE
AILLSDRAFGGADTLSTSNVLAAAISKLAQDDEVGIVFCGKQTIDGDTAQVGPGIAIRLGFSQLTLVDRIEHLDFLAKKI
RVRRKLEGRYEIVEAKLPAMITVVRELNRPRYPTVPMRLKASKGEVRVWDNSELKLDPNSIGLKGSPTWVSRIFSPERSK
GEMLGDGLNDPKGTARLLVERLLARDMLAV

Specific function: May play a role in a redox process involved in nitrogen fixation [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=222, Percent_Identity=32.4324324324324, Blast_Score=102, Evalue=3e-22,
Organism=Homo sapiens, GI62420877, Length=207, Percent_Identity=33.3333333333333, Blast_Score=102, Evalue=4e-22,
Organism=Escherichia coli, GI87081682, Length=255, Percent_Identity=27.843137254902, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI2367123, Length=215, Percent_Identity=26.9767441860465, Blast_Score=65, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI25141345, Length=221, Percent_Identity=29.4117647058824, Blast_Score=101, Evalue=5e-22,
Organism=Saccharomyces cerevisiae, GI6321646, Length=217, Percent_Identity=32.258064516129, Blast_Score=94, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24651147, Length=198, Percent_Identity=30.8080808080808, Blast_Score=91, Evalue=9e-19,
Organism=Drosophila melanogaster, GI24651145, Length=198, Percent_Identity=30.8080808080808, Blast_Score=91, Evalue=9e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 29535; Mature: 29535

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYVVACIKQVPDTTQVQIDPVTNTLVRDGIPFIINPYDTHALEESLRMKGRYGFKAAALS
CEEEEEHHHCCCCCEEEECCCHHHHHHCCCCEEECCCHHHHHHHHHHHCCCCCCEEEEEC
MGPPNAEAALRKALALGVDEAILLSDRAFGGADTLSTSNVLAAAISKLAQDDEVGIVFCG
CCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEC
KQTIDGDTAQVGPGIAIRLGFSQLTLVDRIEHLDFLAKKIRVRRKLEGRYEIVEAKLPAM
CCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHH
ITVVRELNRPRYPTVPMRLKASKGEVRVWDNSELKLDPNSIGLKGSPTWVSRIFSPERSK
HHHHHHHCCCCCCCCCEEEECCCCCEEEECCCCEEECCCCCCCCCCHHHHHHHCCCCCCC
GEMLGDGLNDPKGTARLLVERLLARDMLAV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYVVACIKQVPDTTQVQIDPVTNTLVRDGIPFIINPYDTHALEESLRMKGRYGFKAAALS
CEEEEEHHHCCCCCEEEECCCHHHHHHCCCCEEECCCHHHHHHHHHHHCCCCCCEEEEEC
MGPPNAEAALRKALALGVDEAILLSDRAFGGADTLSTSNVLAAAISKLAQDDEVGIVFCG
CCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEC
KQTIDGDTAQVGPGIAIRLGFSQLTLVDRIEHLDFLAKKIRVRRKLEGRYEIVEAKLPAM
CCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHH
ITVVRELNRPRYPTVPMRLKASKGEVRVWDNSELKLDPNSIGLKGSPTWVSRIFSPERSK
HHHHHHHCCCCCCCCCEEEECCCCCEEEECCCCEEECCCCCCCCCCHHHHHHHCCCCCCC
GEMLGDGLNDPKGTARLLVERLLARDMLAV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA