Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197117723

Identifier: 197117723

GI number: 197117723

Start: 1538602

End: 1539231

Strand: Direct

Name: 197117723

Synonym: Gbem_1335

Alternate gene names: NA

Gene position: 1538602-1539231 (Clockwise)

Preceding gene: 197117722

Following gene: 197117725

Centisome position: 33.34

GC content: 62.06

Gene sequence:

>630_bases
ATGGACCAGGCTTGCGAACTGATACTGCCTCATGGAGGCTTCCGGAAGCTGCGTAGCTTCGCCGTTGCGCTGGCGGCTTA
TGACGGCACCGTGCTTTTTTGCGACCGGTTTGTGCAGAAGCGCTCGCGCACCCACGACCAGATGGTGCAGGCCGCGCGCA
GCGGGGTCCAGAACATAGCCGAAGGGTCGCTCGCCTCCGGGACTTCCAAAAAGACCGAGCTGAAGCTGACCGGCGTAGCT
CGGGCCAGTCTGGGCGAGCTGATCAGGGACTACGAAGACTATCTGCGGCAGAACCGGCTGGAGATTTGGGACAAGGATTC
GGCGCGCGTGCGCGCCATGCGGGCCAGGCTCGCCGGGAAGCTGAAAAGGGGAAAGGCATTGTCGGACCAGTCGGACAGGT
CAGACAGGTCTGACAGGTCTGACAGGTCTGAGTTTTTCGACGAACCGCTGCTGTCTGCGCTGCAGGCGCTTCGTAGCGCC
AGCGCGGAAGTGAGCGCCAACATCCTGCTCTGCTTGACGCACCAGGCAAGCTACCTGCTCAAGCGCCAGATGGACCGGCT
GGCGAGTGACTTCGCCGAAAACGGCGGCTTCACCGAAAGGCTCTACCACTACCGTAAAGAGCACCGCTGA

Upstream 100 bases:

>100_bases
CGGAGAGGTGGCCGACGTGCTGGTAGTTGCGGACGTGATGCAGTTCGTTCCAGCTCTCACCGCAAAGCTGGCTAAGTGAG
GGCAACAACGAGGAGCCGGT

Downstream 100 bases:

>100_bases
ATCCCTACTGCATCAACTCCAGAAAATCATCCTCGCTCAACACCCGCACGCCCAGCTGCTGCGCTTTATCCAGCTTGCTC
CCGGCATCGGCGCCGGCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MDQACELILPHGGFRKLRSFAVALAAYDGTVLFCDRFVQKRSRTHDQMVQAARSGVQNIAEGSLASGTSKKTELKLTGVA
RASLGELIRDYEDYLRQNRLEIWDKDSARVRAMRARLAGKLKRGKALSDQSDRSDRSDRSDRSEFFDEPLLSALQALRSA
SAEVSANILLCLTHQASYLLKRQMDRLASDFAENGGFTERLYHYRKEHR

Sequences:

>Translated_209_residues
MDQACELILPHGGFRKLRSFAVALAAYDGTVLFCDRFVQKRSRTHDQMVQAARSGVQNIAEGSLASGTSKKTELKLTGVA
RASLGELIRDYEDYLRQNRLEIWDKDSARVRAMRARLAGKLKRGKALSDQSDRSDRSDRSDRSEFFDEPLLSALQALRSA
SAEVSANILLCLTHQASYLLKRQMDRLASDFAENGGFTERLYHYRKEHR
>Mature_209_residues
MDQACELILPHGGFRKLRSFAVALAAYDGTVLFCDRFVQKRSRTHDQMVQAARSGVQNIAEGSLASGTSKKTELKLTGVA
RASLGELIRDYEDYLRQNRLEIWDKDSARVRAMRARLAGKLKRGKALSDQSDRSDRSDRSDRSEFFDEPLLSALQALRSA
SAEVSANILLCLTHQASYLLKRQMDRLASDFAENGGFTERLYHYRKEHR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23659; Mature: 23659

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQACELILPHGGFRKLRSFAVALAAYDGTVLFCDRFVQKRSRTHDQMVQAARSGVQNIA
CCCCCCEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
EGSLASGTSKKTELKLTGVARASLGELIRDYEDYLRQNRLEIWDKDSARVRAMRARLAGK
CCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHH
LKRGKALSDQSDRSDRSDRSDRSEFFDEPLLSALQALRSASAEVSANILLCLTHQASYLL
HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCHHEEEEHHHHHHHH
KRQMDRLASDFAENGGFTERLYHYRKEHR
HHHHHHHHHHHHHCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MDQACELILPHGGFRKLRSFAVALAAYDGTVLFCDRFVQKRSRTHDQMVQAARSGVQNIA
CCCCCCEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
EGSLASGTSKKTELKLTGVARASLGELIRDYEDYLRQNRLEIWDKDSARVRAMRARLAGK
CCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHH
LKRGKALSDQSDRSDRSDRSDRSEFFDEPLLSALQALRSASAEVSANILLCLTHQASYLL
HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCHHEEEEHHHHHHHH
KRQMDRLASDFAENGGFTERLYHYRKEHR
HHHHHHHHHHHHHCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA