Click here to switch to the map view.

The map label for this gene is 197117689

Identifier: 197117689

GI number: 197117689

Start: 1503102

End: 1503695

Strand: Direct

Name: 197117689

Synonym: Gbem_1301

Alternate gene names: NA

Gene position: 1503102-1503695 (Clockwise)

Preceding gene: 197117688

Following gene: 197117690

Centisome position: 32.57

GC content: 61.28

Gene sequence:

>594_bases
ATGCCCAAGGCCAACCCGCAAAGAAGCTGCCTCGCCTGCCGTGAGACCAAGGACAAGGGGAGCCTGCTTCGCCTGGTGCT
GGCCCCGGACGGCACGGTAGTCCCCGACCTGCAGCAGAAACTTCCCGGACGCGGTGCCTATACCTGCATGAAGGGGAGCT
GCCTCAAGCAGGCGGCGCAAAAAAGGCAGTTCGGCCGCGGCTTCAAAACCGAGGTCGCCCAGGTCGACCCGGAAGGGCTG
GCGCGGCAGGTAGTAGAAAAGCTCGAGGAGCGGATAGCCTCCTATCTCTCCCTGGCCAACAAGGCCGGGAAGATCGTCTC
GGGCTCGGACCAGGCGCTGGAGAAGCTGAAAAAGAGCGGAGCCGGGATCCTCTTTCTGGCCACAGACATCTCCGCCGACA
TCGGGGAGAAGTTCCGCGCCGTCGCGAAGCTTAGGGGGGTACCGTGCGTCTCCCTGTTCACCAAGGAACGCCTCGGGGCG
CTTTTGGGCAAAGAGCTTAGGAGTGTCCTCGTGGTGACGGAGAGCGGCTTTGTCGGGTCTATTGAATTGGAAATTGAAAA
GTACAGGAACTTCTTTGAGGAGGAGCGTGAGTAG

Upstream 100 bases:

>100_bases
TGCCTCCTACGACGGCACCGAGGTGGAAGAGGAGCCGGCCGAAGAGGCGACGGAAGCCCAGCCGCAGGTCGAGGCCGCCG
AAGAGGAGATCTAGCGCAGC

Downstream 100 bases:

>100_bases
ATGAGCAAAACCCGCGTATATGAGCTGGCGCAGCAGATGGGGATAGACAATAAAGAGCTTATGGCAAGGCTGGCCGACGC
TGGTGTGTCGGTAAAGAACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MPKANPQRSCLACRETKDKGSLLRLVLAPDGTVVPDLQQKLPGRGAYTCMKGSCLKQAAQKRQFGRGFKTEVAQVDPEGL
ARQVVEKLEERIASYLSLANKAGKIVSGSDQALEKLKKSGAGILFLATDISADIGEKFRAVAKLRGVPCVSLFTKERLGA
LLGKELRSVLVVTESGFVGSIELEIEKYRNFFEEERE

Sequences:

>Translated_197_residues
MPKANPQRSCLACRETKDKGSLLRLVLAPDGTVVPDLQQKLPGRGAYTCMKGSCLKQAAQKRQFGRGFKTEVAQVDPEGL
ARQVVEKLEERIASYLSLANKAGKIVSGSDQALEKLKKSGAGILFLATDISADIGEKFRAVAKLRGVPCVSLFTKERLGA
LLGKELRSVLVVTESGFVGSIELEIEKYRNFFEEERE
>Mature_196_residues
PKANPQRSCLACRETKDKGSLLRLVLAPDGTVVPDLQQKLPGRGAYTCMKGSCLKQAAQKRQFGRGFKTEVAQVDPEGLA
RQVVEKLEERIASYLSLANKAGKIVSGSDQALEKLKKSGAGILFLATDISADIGEKFRAVAKLRGVPCVSLFTKERLGAL
LGKELRSVLVVTESGFVGSIELEIEKYRNFFEEERE

Specific function: Unknown

COG id: COG2740

COG function: function code K; Predicted nucleic-acid-binding protein implicated in transcription termination

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21531; Mature: 21400

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKANPQRSCLACRETKDKGSLLRLVLAPDGTVVPDLQQKLPGRGAYTCMKGSCLKQAAQ
CCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHCCCCCCHHHHCCHHHHHHHH
KRQFGRGFKTEVAQVDPEGLARQVVEKLEERIASYLSLANKAGKIVSGSDQALEKLKKSG
HHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCC
AGILFLATDISADIGEKFRAVAKLRGVPCVSLFTKERLGALLGKELRSVLVVTESGFVGS
CCEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEE
IELEIEKYRNFFEEERE
EEEHHHHHHHHHHHHCC
>Mature Secondary Structure 
PKANPQRSCLACRETKDKGSLLRLVLAPDGTVVPDLQQKLPGRGAYTCMKGSCLKQAAQ
CCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHCCCCCCHHHHCCHHHHHHHH
KRQFGRGFKTEVAQVDPEGLARQVVEKLEERIASYLSLANKAGKIVSGSDQALEKLKKSG
HHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCC
AGILFLATDISADIGEKFRAVAKLRGVPCVSLFTKERLGALLGKELRSVLVVTESGFVGS
CCEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEE
IELEIEKYRNFFEEERE
EEEHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA