| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is ftsX [H]
Identifier: 197117676
GI number: 197117676
Start: 1485489
End: 1486433
Strand: Direct
Name: ftsX [H]
Synonym: Gbem_1288
Alternate gene names: 197117676
Gene position: 1485489-1486433 (Clockwise)
Preceding gene: 197117675
Following gene: 197117677
Centisome position: 32.19
GC content: 62.65
Gene sequence:
>945_bases ATGTCCAAAACTAACAAGGCGGTCCGTCCCAAGCTGGCGCAGGAGGGCTTCTTCGGGCGCTTGAGCTATTACTCCAGCCG CGCCGTCGCGAACCTCAGGCAAAACGTCTTCGTGAGCGCGGTCACCGTCGGGACCATCGCGCTTGCGCTTCTCATCGCCT CGCTCTTTCTGCTGGTCTACGTGAACCTTTCCGGAATGGCCGAGGGATGGAGCGACAAGGTGCAGGTGACCGCCTACTTC GATGCCGAGCCGGCCCCGCTGGCGGTGGCCGCGCTGAAGGGGAGGGTGCAGGCCATACCCGGCACCGCCAAGGTTCTCTT CGTGAGCCAGGCCGAGGCGGAGAAACGCCTGCGGAGCCGGCTCAAGGGGCAGGAGTCCCTTCTTGAGGGAATCTCCGCCG AAGTGCTCCCCGCATCGCTCGAGATCCGCCTGGACCGCGACCACCGCGACAACGAGTCGGTGGCGGCCTACGTGGCGAAG CTCAAGCAGATCCAGGGGATCACCGAGGTGCAGTACGGCGAGGAGTGGGTCAGGCGCTTCAACTCTTTCATGAACCTCTT CCGCCTGATGGGGGCGCTCCTCGGGGGCTTCCTCACCATAACGGTGCTCTTCATCGTCTCCAACACCATTAAGCTCACCA TCTACGCAAGGAAGGACGAACTGGAGCTCCTGGGCCTTGTGGGGGCGACCCGCTTCTTCATCAAGGCTCCTTTCCTCATC GAGGGGGTGCTGCAGGGGGCAGCAGGGGCGGTGATCTCGCTTTTGGCGCTTCTTGGTTGCTATTTCGCCTTCCTGAAGAA CGCCGGTGACTTCCTCGGCATCAACCCGGCTTCGGCTGGGCTTTCCTTTCTTCCCCCCTCGCACCTGGCTGGGGTAGTAC TGGGAGGCGTGCTGCTCGGTTTCATCGGCAGCGCGACCTCGCTGAAGAGGTTCATAAACGTCTAG
Upstream 100 bases:
>100_bases GGCACCACCGTGGTGGTGGCGACCCACGACCGGCGCGTGATCGAGAACTCCCACCGCAGGGTGATCCGGCTGGAGAAGGG ACGCATGGTGGAGGTGCCCG
Downstream 100 bases:
>100_bases CATGCGTCACATTCTACTGATAAGCTGTCTGGCCCTGATTTTGGCCCCTTCCCTTTGCGGCGCGGGGGCCAAGGAAGAGC TGCAGACCATAAAGAAACAG
Product: cell division ABC transporter membrane protein FtsX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MSKTNKAVRPKLAQEGFFGRLSYYSSRAVANLRQNVFVSAVTVGTIALALLIASLFLLVYVNLSGMAEGWSDKVQVTAYF DAEPAPLAVAALKGRVQAIPGTAKVLFVSQAEAEKRLRSRLKGQESLLEGISAEVLPASLEIRLDRDHRDNESVAAYVAK LKQIQGITEVQYGEEWVRRFNSFMNLFRLMGALLGGFLTITVLFIVSNTIKLTIYARKDELELLGLVGATRFFIKAPFLI EGVLQGAAGAVISLLALLGCYFAFLKNAGDFLGINPASAGLSFLPPSHLAGVVLGGVLLGFIGSATSLKRFINV
Sequences:
>Translated_314_residues MSKTNKAVRPKLAQEGFFGRLSYYSSRAVANLRQNVFVSAVTVGTIALALLIASLFLLVYVNLSGMAEGWSDKVQVTAYF DAEPAPLAVAALKGRVQAIPGTAKVLFVSQAEAEKRLRSRLKGQESLLEGISAEVLPASLEIRLDRDHRDNESVAAYVAK LKQIQGITEVQYGEEWVRRFNSFMNLFRLMGALLGGFLTITVLFIVSNTIKLTIYARKDELELLGLVGATRFFIKAPFLI EGVLQGAAGAVISLLALLGCYFAFLKNAGDFLGINPASAGLSFLPPSHLAGVVLGGVLLGFIGSATSLKRFINV >Mature_313_residues SKTNKAVRPKLAQEGFFGRLSYYSSRAVANLRQNVFVSAVTVGTIALALLIASLFLLVYVNLSGMAEGWSDKVQVTAYFD AEPAPLAVAALKGRVQAIPGTAKVLFVSQAEAEKRLRSRLKGQESLLEGISAEVLPASLEIRLDRDHRDNESVAAYVAKL KQIQGITEVQYGEEWVRRFNSFMNLFRLMGALLGGFLTITVLFIVSNTIKLTIYARKDELELLGLVGATRFFIKAPFLIE GVLQGAAGAVISLLALLGCYFAFLKNAGDFLGINPASAGLSFLPPSHLAGVVLGGVLLGFIGSATSLKRFINV
Specific function: Part of the ABC transporter ftsEX involved in sporulation. May act as an importer, possibly at the top of a hierarchical cascade leading to the correct temporal initiation of sporulation. Acts upstream of the histidine kinases KinA, KinB and KInC, the Rap
COG id: COG2177
COG function: function code D; Cell division protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable). Note=Unlike the E.coli ortholog, localization is not restricted to division septa, nor is it dependent on ftsZ [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ABC-4 integral membrane protein family. FtsX subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789872, Length=234, Percent_Identity=29.0598290598291, Blast_Score=103, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003838 [H]
Pfam domain/function: PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 33847; Mature: 33716
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKTNKAVRPKLAQEGFFGRLSYYSSRAVANLRQNVFVSAVTVGTIALALLIASLFLLVY CCCCCCHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VNLSGMAEGWSDKVQVTAYFDAEPAPLAVAALKGRVQAIPGTAKVLFVSQAEAEKRLRSR HHHCCCCCCCCCCEEEEEEECCCCCCHHHHHHHCCCEECCCCEEEEEEEHHHHHHHHHHH LKGQESLLEGISAEVLPASLEIRLDRDHRDNESVAAYVAKLKQIQGITEVQYGEEWVRRF HCCHHHHHHCCCHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH NSFMNLFRLMGALLGGFLTITVLFIVSNTIKLTIYARKDELELLGLVGATRFFIKAPFLI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHCHHHH EGVLQGAAGAVISLLALLGCYFAFLKNAGDFLGINPASAGLSFLPPSHLAGVVLGGVLLG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHCCCCCCCHHHHHHHHHHHHHHH FIGSATSLKRFINV HHCCHHHHHHHHCC >Mature Secondary Structure SKTNKAVRPKLAQEGFFGRLSYYSSRAVANLRQNVFVSAVTVGTIALALLIASLFLLVY CCCCCHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VNLSGMAEGWSDKVQVTAYFDAEPAPLAVAALKGRVQAIPGTAKVLFVSQAEAEKRLRSR HHHCCCCCCCCCCEEEEEEECCCCCCHHHHHHHCCCEECCCCEEEEEEEHHHHHHHHHHH LKGQESLLEGISAEVLPASLEIRLDRDHRDNESVAAYVAKLKQIQGITEVQYGEEWVRRF HCCHHHHHHCCCHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH NSFMNLFRLMGALLGGFLTITVLFIVSNTIKLTIYARKDELELLGLVGATRFFIKAPFLI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHCHHHH EGVLQGAAGAVISLLALLGCYFAFLKNAGDFLGINPASAGLSFLPPSHLAGVVLGGVLLG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHCCCCCCCHHHHHHHHHHHHHHH FIGSATSLKRFINV HHCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]