| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197117665
Identifier: 197117665
GI number: 197117665
Start: 1475414
End: 1475599
Strand: Direct
Name: 197117665
Synonym: Gbem_1277
Alternate gene names: NA
Gene position: 1475414-1475599 (Clockwise)
Preceding gene: 197117664
Following gene: 197117666
Centisome position: 31.97
GC content: 62.37
Gene sequence:
>186_bases ATGTCCGATACGCTTTGGTCCATAATCTGCCTCGCCGGGCTCTGGGGCTTCGTCGCCTGCACTATTTTGCTGATCCTCAA GGCCTTTCCGGCCCGGGACAGCTTCGACCGCTCCGCCGCCCTCAAATGGGGAGCGGGCGTGCTCGTCTGTTTCGTCGCGT GGATCGTCGGCATGACTCAGGCCTGA
Upstream 100 bases:
>100_bases CGAAGATGTCCAAGAGGATCGTGCGCGAGGCGGTGGTGATGGTATGGAAGCTGAAGTTCGGCTCGCTGTTACGGGGCCTT TTGCCCAAGGAGAGGGTGTG
Downstream 100 bases:
>100_bases CCGCCGCAGTAGACAGAATTGGTTTTCTTTTAAGTTTTAATTCAGCCCTATTTGTGGTACTCATAGTGCCTTATGCCCGT CTTTACCTGTAAAATAGGCG
Product: lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 61; Mature: 60
Protein sequence:
>61_residues MSDTLWSIICLAGLWGFVACTILLILKAFPARDSFDRSAALKWGAGVLVCFVAWIVGMTQA
Sequences:
>Translated_61_residues MSDTLWSIICLAGLWGFVACTILLILKAFPARDSFDRSAALKWGAGVLVCFVAWIVGMTQA >Mature_60_residues SDTLWSIICLAGLWGFVACTILLILKAFPARDSFDRSAALKWGAGVLVCFVAWIVGMTQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6606; Mature: 6475
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 5.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTLWSIICLAGLWGFVACTILLILKAFPARDSFDRSAALKWGAGVLVCFVAWIVGMTQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC A C >Mature Secondary Structure SDTLWSIICLAGLWGFVACTILLILKAFPARDSFDRSAALKWGAGVLVCFVAWIVGMTQ CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA