| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is yjeE [C]
Identifier: 197117651
GI number: 197117651
Start: 1459986
End: 1460447
Strand: Direct
Name: yjeE [C]
Synonym: Gbem_1263
Alternate gene names: 197117651
Gene position: 1459986-1460447 (Clockwise)
Preceding gene: 197117650
Following gene: 197117652
Centisome position: 31.63
GC content: 66.45
Gene sequence:
>462_bases ATGCCAAGCGTGGAGACCAAAAGCTCGGAAGAGACGGTGGAGTTGGGGGCGAGGCTCGGCAGGCTCCTGGAGCCGGGGGA TTTCGTCGCCCTAGTTGGGGAGCTCGGGGCGGGGAAGACCCAGTTCGCCAAGGGGGTCGCCCTGGGGCTCGAGGTGGACC CGGAGACGCCGGTGACAAGCCCCACCTACACCATCTTGAACGTCTACCAGGGGAGGATTCCGCTCTACCACTTCGACCTG TACCGCCTGCAAGGGGCGGACGAGGTGGCCGACCTCGGTTTCGAGGAGTACTTCTCCGGCGACGGGGCCTGCGTGGTCGA GTGGGCCGAGCGCCTGGAAGACGAGGTCCCCGAAGAGCTCCTCACCGTCGAGCTGAGCCACCGCGGGGAGGGGCGCTGCG TTTCCTTTCACGCCGAAGGGGCACGGCCGAATGCCGTTTTGGAAGCCCTTTTCCCCTCCTGA
Upstream 100 bases:
>100_bases GACCAGCAAACGGATTCAGGCGGTGCCGGTCGTGGAGGGACGGCGCGTGGTCGGCATCATCGGCCGCATCGACATGGTGA AGACCATGATCGGGTAGCCG
Downstream 100 bases:
>100_bases TCTCTTGCTATAAACAGCATCTTCAAACAGCGGGTTGCCCGGCCGCGTCAAAGGCCGGGCAACTTGTTTCAAGCCGCAGC CCCGCTCGTCTCATGATGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MPSVETKSSEETVELGARLGRLLEPGDFVALVGELGAGKTQFAKGVALGLEVDPETPVTSPTYTILNVYQGRIPLYHFDL YRLQGADEVADLGFEEYFSGDGACVVEWAERLEDEVPEELLTVELSHRGEGRCVSFHAEGARPNAVLEALFPS
Sequences:
>Translated_153_residues MPSVETKSSEETVELGARLGRLLEPGDFVALVGELGAGKTQFAKGVALGLEVDPETPVTSPTYTILNVYQGRIPLYHFDL YRLQGADEVADLGFEEYFSGDGACVVEWAERLEDEVPEELLTVELSHRGEGRCVSFHAEGARPNAVLEALFPS >Mature_152_residues PSVETKSSEETVELGARLGRLLEPGDFVALVGELGAGKTQFAKGVALGLEVDPETPVTSPTYTILNVYQGRIPLYHFDLY RLQGADEVADLGFEEYFSGDGACVVEWAERLEDEVPEELLTVELSHRGEGRCVSFHAEGARPNAVLEALFPS
Specific function: Unknown
COG id: COG0802
COG function: function code R; Predicted ATPase or kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0079 family [H]
Homologues:
Organism=Escherichia coli, GI1790610, Length=126, Percent_Identity=34.9206349206349, Blast_Score=84, Evalue=4e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003442 [H]
Pfam domain/function: PF02367 UPF0079 [H]
EC number: NA
Molecular weight: Translated: 16643; Mature: 16512
Theoretical pI: Translated: 4.07; Mature: 4.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSVETKSSEETVELGARLGRLLEPGDFVALVGELGAGKTQFAKGVALGLEVDPETPVTS CCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHCCEEEEEEECCCCCCCC PTYTILNVYQGRIPLYHFDLYRLQGADEVADLGFEEYFSGDGACVVEWAERLEDEVPEEL CCHHEEEECCCCCCEEEEEEEEECCCCHHHHCCHHHHHCCCCEEEHHHHHHHHHHCCHHH LTVELSHRGEGRCVSFHAEGARPNAVLEALFPS EEEEECCCCCCCEEEEECCCCCCHHHHHCCCCC >Mature Secondary Structure PSVETKSSEETVELGARLGRLLEPGDFVALVGELGAGKTQFAKGVALGLEVDPETPVTS CCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHCCEEEEEEECCCCCCCC PTYTILNVYQGRIPLYHFDLYRLQGADEVADLGFEEYFSGDGACVVEWAERLEDEVPEEL CCHHEEEECCCCCCEEEEEEEEECCCCHHHHCCHHHHHCCCCEEEHHHHHHHHHHCCHHH LTVELSHRGEGRCVSFHAEGARPNAVLEALFPS EEEEECCCCCCCEEEEECCCCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]