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The map label for this gene is 197117647

Identifier: 197117647

GI number: 197117647

Start: 1456244

End: 1457482

Strand: Direct

Name: 197117647

Synonym: Gbem_1259

Alternate gene names: NA

Gene position: 1456244-1457482 (Clockwise)

Preceding gene: 197117646

Following gene: 197117648

Centisome position: 31.55

GC content: 65.21

Gene sequence:

>1239_bases
ATGAAGAAGCTTTCCTTTCTCGCCTTTATCCTCATGCTGGCGTTCGCCGCCACGGCGGTCGCCGGGGATCCCGTCACCTA
TGCCGCCAAGGCCCGGCAGCTGATCGAGCGCGGCGAATACGAGCAGGCGCTGGACGAGCTGAAGCGGGCCTCCTCGCTCT
TTCCCTACGAGCAGTCGCTCAAGGTCAACCTGGCCCTGACCTACACCGAGATCGCCAAGCGCGACATGAACGCGGGGCGC
TACGCCAAGGCGGCGCGTAGCCTTTCCGAGGCGCGGGAGCTCTTGCCGGGAAACAGGGAGCTCACGCTCATGCGCGGCGT
GGCCCTCTACCTGGACAAGGATTACCTGACGGCGGCAAGCGAGTTCAAGGAAGCAGGCGAGGGCGTCGATCCGCTCATCT
ACCTGGGGAAGATCGGCTACGACACCGGCGACCTGCAGGGGGCGCTTTCCTATTGGCGCCGCGCCCGAGAAATGGAGCCT
GACAACAAGATGCTGGCTACCCTCATCGCCAAGGCGGAGCGGGAACTACCGGTGGAGTCCCGCATGGACAAGGGGTTCAG
CTCCATGTTTGACCTGAGCTTCGATGCGGAGCTCCCTCCGGGGCTCTCAAGAGAGGTGCTGGACGCCCTGGAGAGCGCCT
ACAATTCGGTGGGCGCCGATCTCGGGCTTTTCCCGACCGCGCGCATCCCGGTGCTCCTCTACACCAAGCGCGACTACGGC
AGCGTGACCGCCGGCCCCGACTGGTCCGGAGGGCTCTACGACGGCAAGATCCGGCTCCCGATAGGGGGGATCACAAGGAT
CACCCCGCAACTGCGCGCCGTCATCTTCCACGAATTCACCCACGTGCTGATCGCGGAGATCACCCACGGCAACGTCCCCA
CCTGGCTCAACGAGGGGCTGGCGGAGATCGAGGGGCGCAAGGAGTTCGTCCACCCCGGCCGCAACCCGAACCTGGTCGAC
GCCTCGCATCAGTTGCCCCTGGTCACCCTCTCCGGCTCCTTCACCTCCATGGACGGTCAGCAGGCGGGCCTCGCCTACCA
GCAGAGCTATTCCATGGCCCAGTTCATGGTGAACCGCTACGGGTGGTATGCCGTTCAGAACGTGCTCAAGAACCTGGGGG
AGCGGGTCACCATGGAGAAGGCGGTGGCCAAGGCCCTTTCCGACTGGTCGCTCGACCTGCCGGGGTTGCTGCGCGAGTGG
CAGCAAGCGCTGCCTGCGTCGGCCGGCAAGGCTCAGTGA

Upstream 100 bases:

>100_bases
GTATCGCCCGGAGCATCCGGGAGGCGAGGGGGCAGTCGCCGCAGGAGTTGGTCCTGGAACCGGCGGACCGGCCCGACGGC
GCCGATCTGTCGTCCCGACC

Downstream 100 bases:

>100_bases
GCCGTTGTTGTGAGTATCAGCGTGAACGGTTATAGTGTTAGCAGGACCGCGAGATCGATTCGATCTGACAGATCTCCCGG
AAGACAGGAGCTTTTGTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Domain Protein; Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MKKLSFLAFILMLAFAATAVAGDPVTYAAKARQLIERGEYEQALDELKRASSLFPYEQSLKVNLALTYTEIAKRDMNAGR
YAKAARSLSEARELLPGNRELTLMRGVALYLDKDYLTAASEFKEAGEGVDPLIYLGKIGYDTGDLQGALSYWRRAREMEP
DNKMLATLIAKAERELPVESRMDKGFSSMFDLSFDAELPPGLSREVLDALESAYNSVGADLGLFPTARIPVLLYTKRDYG
SVTAGPDWSGGLYDGKIRLPIGGITRITPQLRAVIFHEFTHVLIAEITHGNVPTWLNEGLAEIEGRKEFVHPGRNPNLVD
ASHQLPLVTLSGSFTSMDGQQAGLAYQQSYSMAQFMVNRYGWYAVQNVLKNLGERVTMEKAVAKALSDWSLDLPGLLREW
QQALPASAGKAQ

Sequences:

>Translated_412_residues
MKKLSFLAFILMLAFAATAVAGDPVTYAAKARQLIERGEYEQALDELKRASSLFPYEQSLKVNLALTYTEIAKRDMNAGR
YAKAARSLSEARELLPGNRELTLMRGVALYLDKDYLTAASEFKEAGEGVDPLIYLGKIGYDTGDLQGALSYWRRAREMEP
DNKMLATLIAKAERELPVESRMDKGFSSMFDLSFDAELPPGLSREVLDALESAYNSVGADLGLFPTARIPVLLYTKRDYG
SVTAGPDWSGGLYDGKIRLPIGGITRITPQLRAVIFHEFTHVLIAEITHGNVPTWLNEGLAEIEGRKEFVHPGRNPNLVD
ASHQLPLVTLSGSFTSMDGQQAGLAYQQSYSMAQFMVNRYGWYAVQNVLKNLGERVTMEKAVAKALSDWSLDLPGLLREW
QQALPASAGKAQ
>Mature_412_residues
MKKLSFLAFILMLAFAATAVAGDPVTYAAKARQLIERGEYEQALDELKRASSLFPYEQSLKVNLALTYTEIAKRDMNAGR
YAKAARSLSEARELLPGNRELTLMRGVALYLDKDYLTAASEFKEAGEGVDPLIYLGKIGYDTGDLQGALSYWRRAREMEP
DNKMLATLIAKAERELPVESRMDKGFSSMFDLSFDAELPPGLSREVLDALESAYNSVGADLGLFPTARIPVLLYTKRDYG
SVTAGPDWSGGLYDGKIRLPIGGITRITPQLRAVIFHEFTHVLIAEITHGNVPTWLNEGLAEIEGRKEFVHPGRNPNLVD
ASHQLPLVTLSGSFTSMDGQQAGLAYQQSYSMAQFMVNRYGWYAVQNVLKNLGERVTMEKAVAKALSDWSLDLPGLLREW
QQALPASAGKAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45529; Mature: 45529

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLSFLAFILMLAFAATAVAGDPVTYAAKARQLIERGEYEQALDELKRASSLFPYEQSL
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCC
KVNLALTYTEIAKRDMNAGRYAKAARSLSEARELLPGNRELTLMRGVALYLDKDYLTAAS
EEEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEHHHHEEHEECCHHHHHHH
EFKEAGEGVDPLIYLGKIGYDTGDLQGALSYWRRAREMEPDNKMLATLIAKAERELPVES
HHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHH
RMDKGFSSMFDLSFDAELPPGLSREVLDALESAYNSVGADLGLFPTARIPVLLYTKRDYG
HHCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCC
SVTAGPDWSGGLYDGKIRLPIGGITRITPQLRAVIFHEFTHVLIAEITHGNVPTWLNEGL
CCCCCCCCCCCEECCEEEECCCCHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
AEIEGRKEFVHPGRNPNLVDASHQLPLVTLSGSFTSMDGQQAGLAYQQSYSMAQFMVNRY
HHHCCCHHHCCCCCCCCEECCCCCCCEEEECCCCCCCCCCHHCHHHHHHHHHHHHHHHHH
GWYAVQNVLKNLGERVTMEKAVAKALSDWSLDLPGLLREWQQALPASAGKAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKKLSFLAFILMLAFAATAVAGDPVTYAAKARQLIERGEYEQALDELKRASSLFPYEQSL
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCC
KVNLALTYTEIAKRDMNAGRYAKAARSLSEARELLPGNRELTLMRGVALYLDKDYLTAAS
EEEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEHHHHEEHEECCHHHHHHH
EFKEAGEGVDPLIYLGKIGYDTGDLQGALSYWRRAREMEPDNKMLATLIAKAERELPVES
HHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHH
RMDKGFSSMFDLSFDAELPPGLSREVLDALESAYNSVGADLGLFPTARIPVLLYTKRDYG
HHCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCC
SVTAGPDWSGGLYDGKIRLPIGGITRITPQLRAVIFHEFTHVLIAEITHGNVPTWLNEGL
CCCCCCCCCCCEECCEEEECCCCHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
AEIEGRKEFVHPGRNPNLVDASHQLPLVTLSGSFTSMDGQQAGLAYQQSYSMAQFMVNRY
HHHCCCHHHCCCCCCCCEECCCCCCCEEEECCCCCCCCCCHHCHHHHHHHHHHHHHHHHH
GWYAVQNVLKNLGERVTMEKAVAKALSDWSLDLPGLLREWQQALPASAGKAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA