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The map label for this gene is yibQ [H]

Identifier: 197117641

GI number: 197117641

Start: 1448918

End: 1449871

Strand: Direct

Name: yibQ [H]

Synonym: Gbem_1253

Alternate gene names: 197117641

Gene position: 1448918-1449871 (Clockwise)

Preceding gene: 197117638

Following gene: 197117643

Centisome position: 31.39

GC content: 64.15

Gene sequence:

>954_bases
TTGGCAAAAAAGGGCAGGTCGGTAAACAGACGTAAACCTTCACCGGGGGGGGGGCGCAGGCCTTTGGTCGCGCTGATTGC
GGTCGCCATCGTGATCGCCCTTGCCCTGTTCTTCTTGGAGAAGAGCCGCAAGGAGCCGGCACCGGCCGCGCCGGCAAAGG
TCGAAGCGCCGGCGGTTACCTCTCCGCATCTCCCTCTACCCGAACATGCGAAGCCGGTGCAGCAAAACCTCTCCACCGCC
CAGGCCCCGGCTCCCAAACCCCATGTCGCCGTTGTCCCGCGCGCGCATGGGCCCGGGCGCGTCGCCATAATCATCGACGA
CATGGGGAGCAGCATGCAGGAACTGCAGACGCTGCAATCCATAGGACTCCCCATCACCTATTCCATCATCCCGAGCCTTC
CCCGCGCGCGTCAAGTGGCTGATTCCGCGCACGCGGCTGGCGCCGAGGTGATGGTGCACATGCCGATGGAGCCGGAGGGG
TATCCGAAGCAGAAGATGGAAAGCATCGGGCTTTTGGTGACCATGGACGACGCCGAGATAGCGAAGCGGGTGAGCGATTA
CTTCAGCCGCGTGCCGCATGCCGTGGGGGCCAACAACCACATGGGGTCGCGCTTCACGCAGCATGCGGACAAGATGGAGG
CGGCGCTTGGGGTCTTGAAGGAGAAGGGGGTGTTCTTCATCGACAGCAGGACTTCTCCCGCCTCGGTCGGCTACCAGACC
GCCCGCGCCCTGGGGATAAAGGCGGGGACCCGGCAGGTGTTCCTGGACAACGTGCAGGATGAGGGGGCGATAGGAAAGCA
GCTTTTAGAGGCCGCCGCCGTCGCCAGGAAAAGGGGCGGGGCGATAGCCATCTGCCACCCGCACCCCGCGACCCTGCGAG
CTCTGAAGGCTTACCTGCCGGAGTTGGCCAAGACCGGCATCACCTTCGTCTACGCCTCCGCTTTAACCAGCTGA

Upstream 100 bases:

>100_bases
GCGAAGTAAGCGCGTCACAGCTCAAATGATTTGCATTGTCTGCGACGATCATGCTATTTCCCTGTCGTTGTTTATAAAGA
GACAGTGGCGGAGGTAGGTT

Downstream 100 bases:

>100_bases
AAACCATCACGCAAAGCCGTCACGCAAAGCCGCAAAGGCGCAAAGAACGTCAAAACCCACGGGTGGGGTCTTGGCGTCTT
TGCGCCTTTGCATGAGTGGC

Product: divergent polysaccharide deacetylase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 316

Protein sequence:

>317_residues
MAKKGRSVNRRKPSPGGGRRPLVALIAVAIVIALALFFLEKSRKEPAPAAPAKVEAPAVTSPHLPLPEHAKPVQQNLSTA
QAPAPKPHVAVVPRAHGPGRVAIIIDDMGSSMQELQTLQSIGLPITYSIIPSLPRARQVADSAHAAGAEVMVHMPMEPEG
YPKQKMESIGLLVTMDDAEIAKRVSDYFSRVPHAVGANNHMGSRFTQHADKMEAALGVLKEKGVFFIDSRTSPASVGYQT
ARALGIKAGTRQVFLDNVQDEGAIGKQLLEAAAVARKRGGAIAICHPHPATLRALKAYLPELAKTGITFVYASALTS

Sequences:

>Translated_317_residues
MAKKGRSVNRRKPSPGGGRRPLVALIAVAIVIALALFFLEKSRKEPAPAAPAKVEAPAVTSPHLPLPEHAKPVQQNLSTA
QAPAPKPHVAVVPRAHGPGRVAIIIDDMGSSMQELQTLQSIGLPITYSIIPSLPRARQVADSAHAAGAEVMVHMPMEPEG
YPKQKMESIGLLVTMDDAEIAKRVSDYFSRVPHAVGANNHMGSRFTQHADKMEAALGVLKEKGVFFIDSRTSPASVGYQT
ARALGIKAGTRQVFLDNVQDEGAIGKQLLEAAAVARKRGGAIAICHPHPATLRALKAYLPELAKTGITFVYASALTS
>Mature_316_residues
AKKGRSVNRRKPSPGGGRRPLVALIAVAIVIALALFFLEKSRKEPAPAAPAKVEAPAVTSPHLPLPEHAKPVQQNLSTAQ
APAPKPHVAVVPRAHGPGRVAIIIDDMGSSMQELQTLQSIGLPITYSIIPSLPRARQVADSAHAAGAEVMVHMPMEPEGY
PKQKMESIGLLVTMDDAEIAKRVSDYFSRVPHAVGANNHMGSRFTQHADKMEAALGVLKEKGVFFIDSRTSPASVGYQTA
RALGIKAGTRQVFLDNVQDEGAIGKQLLEAAAVARKRGGAIAICHPHPATLRALKAYLPELAKTGITFVYASALTS

Specific function: Unknown

COG id: COG2861

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0755 [H]

Homologues:

Organism=Escherichia coli, GI87082298, Length=219, Percent_Identity=36.986301369863, Blast_Score=145, Evalue=4e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006837
- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF04748 Polysacc_deac_2 [H]

EC number: NA

Molecular weight: Translated: 33643; Mature: 33511

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKGRSVNRRKPSPGGGRRPLVALIAVAIVIALALFFLEKSRKEPAPAAPAKVEAPAVT
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
SPHLPLPEHAKPVQQNLSTAQAPAPKPHVAVVPRAHGPGRVAIIIDDMGSSMQELQTLQS
CCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEEEECCCCHHHHHHHHHH
IGLPITYSIIPSLPRARQVADSAHAAGAEVMVHMPMEPEGYPKQKMESIGLLVTMDDAEI
CCCCEEEHHHCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHCCEEEEECHHHH
AKRVSDYFSRVPHAVGANNHMGSRFTQHADKMEAALGVLKEKGVFFIDSRTSPASVGYQT
HHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHH
ARALGIKAGTRQVFLDNVQDEGAIGKQLLEAAAVARKRGGAIAICHPHPATLRALKAYLP
HHHHHCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHH
ELAKTGITFVYASALTS
HHHHCCHHHHHHHHHCC
>Mature Secondary Structure 
AKKGRSVNRRKPSPGGGRRPLVALIAVAIVIALALFFLEKSRKEPAPAAPAKVEAPAVT
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
SPHLPLPEHAKPVQQNLSTAQAPAPKPHVAVVPRAHGPGRVAIIIDDMGSSMQELQTLQS
CCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEEEECCCCHHHHHHHHHH
IGLPITYSIIPSLPRARQVADSAHAAGAEVMVHMPMEPEGYPKQKMESIGLLVTMDDAEI
CCCCEEEHHHCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHCCEEEEECHHHH
AKRVSDYFSRVPHAVGANNHMGSRFTQHADKMEAALGVLKEKGVFFIDSRTSPASVGYQT
HHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHH
ARALGIKAGTRQVFLDNVQDEGAIGKQLLEAAAVARKRGGAIAICHPHPATLRALKAYLP
HHHHHCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHH
ELAKTGITFVYASALTS
HHHHCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]