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The map label for this gene is nfeD [H]

Identifier: 197117601

GI number: 197117601

Start: 1405839

End: 1407158

Strand: Direct

Name: nfeD [H]

Synonym: Gbem_1213

Alternate gene names: 197117601

Gene position: 1405839-1407158 (Clockwise)

Preceding gene: 197117600

Following gene: 197117603

Centisome position: 30.46

GC content: 63.86

Gene sequence:

>1320_bases
GTGAAGAGACTCTTATTGCTGGCGTTGCTGGTTCTGGGGCTAGTGCTGCCGATGCGGCTTTTCGGGGAGCAACCGCAGGT
GGCGGTCATCTCGGTGCGCGGCCCGATCAACCCGGTCACCTCAAGCTATCTGAAGCAGAGCCTGGAGGCGGCGGGAAAGC
GCGGGGACCGGCTCCTCATGGTCGAGCTGGACACGCCAGGGGGGCTGGATACGGCGATGCGCGACGCGGTGCAGGCCATC
TTCGCAAGCCCCGTCCCGGTCGCGGTCTACGTCACGCCGTCCGGGGCTCGCGCCGCTTCGGCAGGGGCGGTGATAGGGCT
GTCGGCGGACGTCCTGGCCATGGCCCCGGGGACCAACATCGGCGCCGCGCATCCGGTGGGGCTTGGGGGCGAAAAGCCGG
ACAAGGTGATGGAGTCGAAGATCGTCAACGACGCGGAGGCGTACGTTGACGGCATCGCCAAAAAGCGCGGCCGCAACGTG
GAACTCGCCAGGCGTATGGTGCGCGACAGCATCTCGCTCACCTCGGAGGCTGCGCTGCAGCAAAGGGTGATCGACCTGAT
CGCCGCCGACCGGCAGGAGCTTCTGGCCAAGCTGGAAGGGCGCAAGGTGCTCCGCGGGGGGAAGGAAGTGGTGTTGCATC
TCTCCAGAGCCAAGGTGACCAGCTACGAGATGGGGACCCGCGACAAGATCCTAGACGCCATCAGCAACCCGGATGTCGCG
TACATGCTGATGCTCCTGGGTATGCTGGGGCTCTTTTTCGAGCTCTCAAACCCGGGGGTGATCCTGCCCGGGGTGATCGG
CGGGATCTCTTTGCTCCTCTCGTTCTTCGCCTTGCAGACCCTGCCGGTGAACTACGCGGGGATCGCCCTGATACTGCTCG
CCATCGTCCTATTCATCGCGGAGGTCAAGGTGGTTTCCTACGGGATGCTCGGGGTGGGGGGGATCGTCTCCATGGTGCTC
GGCTCGCTCATGCTCTTTCCGTCGCCGGAGCCGTACCTGCGCCTTTCCTGGAGCGTCATCATCGCCACGGTGCTCTTAAC
CGCAGGGTTCTTCATCGTGGTGGTCGCCAAGGTGGTGCAGGCACACCGGGAAAAGCCGATCACCGGGGTGGAGGGGATGC
TCGGGGAGGAGGGTGTGGCGGACAGCGACATCGACCAGGAGGGAAGGGTGCTGGTGCGGGGCGAGTACTGGAACGCGGTG
AGCGGCGAGCGGATACTCAAAGGGGAGAAGGTGCGGGTGGTGGAGGTAAAGGGACTGCATCTTAAAGTCGAAACCATAAA
CCGCAAACCATTAACAAGGAGAACGTCTGAGGAGATCTGA

Upstream 100 bases:

>100_bases
GGACCAGCACGCATCTCCCTTGGCGGCGCCCTGATCGCTCCCGGGTACGGGTGAGCCGACGCAGTTTCCGAGGGGGAGGA
AGGGTAGGTTAGGAGGTTCC

Downstream 100 bases:

>100_bases
GAAAAGCGAATCTGGAGAAAACAAAACAACCAAATCTTTAGCCACGGAGAAAATCGGAGAAAAACAGACTTTGTGTAAAA
CCGAAACTAAAGCCGAGACT

Product: NfeD-like membrane-bound serine protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 439; Mature: 439

Protein sequence:

>439_residues
MKRLLLLALLVLGLVLPMRLFGEQPQVAVISVRGPINPVTSSYLKQSLEAAGKRGDRLLMVELDTPGGLDTAMRDAVQAI
FASPVPVAVYVTPSGARAASAGAVIGLSADVLAMAPGTNIGAAHPVGLGGEKPDKVMESKIVNDAEAYVDGIAKKRGRNV
ELARRMVRDSISLTSEAALQQRVIDLIAADRQELLAKLEGRKVLRGGKEVVLHLSRAKVTSYEMGTRDKILDAISNPDVA
YMLMLLGMLGLFFELSNPGVILPGVIGGISLLLSFFALQTLPVNYAGIALILLAIVLFIAEVKVVSYGMLGVGGIVSMVL
GSLMLFPSPEPYLRLSWSVIIATVLLTAGFFIVVVAKVVQAHREKPITGVEGMLGEEGVADSDIDQEGRVLVRGEYWNAV
SGERILKGEKVRVVEVKGLHLKVETINRKPLTRRTSEEI

Sequences:

>Translated_439_residues
MKRLLLLALLVLGLVLPMRLFGEQPQVAVISVRGPINPVTSSYLKQSLEAAGKRGDRLLMVELDTPGGLDTAMRDAVQAI
FASPVPVAVYVTPSGARAASAGAVIGLSADVLAMAPGTNIGAAHPVGLGGEKPDKVMESKIVNDAEAYVDGIAKKRGRNV
ELARRMVRDSISLTSEAALQQRVIDLIAADRQELLAKLEGRKVLRGGKEVVLHLSRAKVTSYEMGTRDKILDAISNPDVA
YMLMLLGMLGLFFELSNPGVILPGVIGGISLLLSFFALQTLPVNYAGIALILLAIVLFIAEVKVVSYGMLGVGGIVSMVL
GSLMLFPSPEPYLRLSWSVIIATVLLTAGFFIVVVAKVVQAHREKPITGVEGMLGEEGVADSDIDQEGRVLVRGEYWNAV
SGERILKGEKVRVVEVKGLHLKVETINRKPLTRRTSEEI
>Mature_439_residues
MKRLLLLALLVLGLVLPMRLFGEQPQVAVISVRGPINPVTSSYLKQSLEAAGKRGDRLLMVELDTPGGLDTAMRDAVQAI
FASPVPVAVYVTPSGARAASAGAVIGLSADVLAMAPGTNIGAAHPVGLGGEKPDKVMESKIVNDAEAYVDGIAKKRGRNV
ELARRMVRDSISLTSEAALQQRVIDLIAADRQELLAKLEGRKVLRGGKEVVLHLSRAKVTSYEMGTRDKILDAISNPDVA
YMLMLLGMLGLFFELSNPGVILPGVIGGISLLLSFFALQTLPVNYAGIALILLAIVLFIAEVKVVSYGMLGVGGIVSMVL
GSLMLFPSPEPYLRLSWSVIIATVLLTAGFFIVVVAKVVQAHREKPITGVEGMLGEEGVADSDIDQEGRVLVRGEYWNAV
SGERILKGEKVRVVEVKGLHLKVETINRKPLTRRTSEEI

Specific function: Unknown

COG id: COG1030

COG function: function code O; Membrane-bound serine protease (ClpP class)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002810
- InterPro:   IPR002825 [H]

Pfam domain/function: PF01972 DUF114; PF01957 NfeD [H]

EC number: NA

Molecular weight: Translated: 46968; Mature: 46968

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLLLLALLVLGLVLPMRLFGEQPQVAVISVRGPINPVTSSYLKQSLEAAGKRGDRLLM
CHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEE
VELDTPGGLDTAMRDAVQAIFASPVPVAVYVTPSGARAASAGAVIGLSADVLAMAPGTNI
EEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEECCCCEEEECCCCCC
GAAHPVGLGGEKPDKVMESKIVNDAEAYVDGIAKKRGRNVELARRMVRDSISLTSEAALQ
CCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
QRVIDLIAADRQELLAKLEGRKVLRGGKEVVLHLSRAKVTSYEMGTRDKILDAISNPDVA
HHHHHHHHHHHHHHHHHHCCHHHHHCCHHHEEEHHHHHHHHHCCCCHHHHHHHHCCCCHH
YMLMLLGMLGLFFELSNPGVILPGVIGGISLLLSFFALQTLPVNYAGIALILLAIVLFIA
HHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
EVKVVSYGMLGVGGIVSMVLGSLMLFPSPEPYLRLSWSVIIATVLLTAGFFIVVVAKVVQ
HHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHH
AHREKPITGVEGMLGEEGVADSDIDQEGRVLVRGEYWNAVSGERILKGEKVRVVEVKGLH
HHHCCCCCCHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHCCCCCEEEEEEECEE
LKVETINRKPLTRRTSEEI
EEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MKRLLLLALLVLGLVLPMRLFGEQPQVAVISVRGPINPVTSSYLKQSLEAAGKRGDRLLM
CHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEE
VELDTPGGLDTAMRDAVQAIFASPVPVAVYVTPSGARAASAGAVIGLSADVLAMAPGTNI
EEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEECCCCEEEECCCCCC
GAAHPVGLGGEKPDKVMESKIVNDAEAYVDGIAKKRGRNVELARRMVRDSISLTSEAALQ
CCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
QRVIDLIAADRQELLAKLEGRKVLRGGKEVVLHLSRAKVTSYEMGTRDKILDAISNPDVA
HHHHHHHHHHHHHHHHHHCCHHHHHCCHHHEEEHHHHHHHHHCCCCHHHHHHHHCCCCHH
YMLMLLGMLGLFFELSNPGVILPGVIGGISLLLSFFALQTLPVNYAGIALILLAIVLFIA
HHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
EVKVVSYGMLGVGGIVSMVLGSLMLFPSPEPYLRLSWSVIIATVLLTAGFFIVVVAKVVQ
HHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHH
AHREKPITGVEGMLGEEGVADSDIDQEGRVLVRGEYWNAVSGERILKGEKVRVVEVKGLH
HHHCCCCCCHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHCCCCCEEEEEEECEE
LKVETINRKPLTRRTSEEI
EEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]