| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197117576
Identifier: 197117576
GI number: 197117576
Start: 1381499
End: 1381984
Strand: Reverse
Name: 197117576
Synonym: Gbem_1188
Alternate gene names: NA
Gene position: 1381984-1381499 (Counterclockwise)
Preceding gene: 197117577
Following gene: 197117566
Centisome position: 29.94
GC content: 51.44
Gene sequence:
>486_bases ATGAATGTATTCGATTGTGCTATCAAAAGAGAGGAAGACACCAGGACGTACTTCGAGGGACTGGTAGAAAAAGCTACAGA TCCTGAGCTAAAGACCCTTTTCTCAATGCTGGCCGACTGCGAGGATGAACATAGGAAGAGACTGCTGGACCTCAAGAAGG GTATGGAGAGCAAGACGACGGTGCTCGCAGACCTCGACGTTTCAGTCTGCAGCTACCGCCCCTTCCTTACTCAGAGCGAA CTGCTTGAGGAAAAGGACAAGGACCCGGACCTGTATCTGTTCACCGTTAAAAAGGAGGAGCAGGATATCACCTTTTATCA AGAACTGGCAGCAAGGGCCAGGGACGAACAGACCCGCAAGAGCCTGCTCATGCTGGCGGACGAGGAACGCCGCCACCTGG AACGGATGGAGGAAATTTATGCCTTCGTGGAAACTCCAAGGACCTACCTGGAAAACGGTGAATTCAGCAATCTGAGAACA CTGTAG
Upstream 100 bases:
>100_bases CTTTACTACGGTTGCACTTAACACTCCTTCTTCTGTTATAATGTGTGGCAGGTGGTGACATAACCACTCGCTGCTTTTTG TGGCAAAAGGAGGACACGAG
Downstream 100 bases:
>100_bases CTAAAACAACCACTTCAACTGAAAAAGCCCGCACTAAGCGGGCTTTTTTTTCATTCAGGCAATAAGGGAATTCAGGGTTC TTCGGCCAAGGCTTCGTCAT
Product: ferritin-like domain-containing protein
Products: NA
Alternate protein names: Ferritin-Like Domain-Containing Protein
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MNVFDCAIKREEDTRTYFEGLVEKATDPELKTLFSMLADCEDEHRKRLLDLKKGMESKTTVLADLDVSVCSYRPFLTQSE LLEEKDKDPDLYLFTVKKEEQDITFYQELAARARDEQTRKSLLMLADEERRHLERMEEIYAFVETPRTYLENGEFSNLRT L
Sequences:
>Translated_161_residues MNVFDCAIKREEDTRTYFEGLVEKATDPELKTLFSMLADCEDEHRKRLLDLKKGMESKTTVLADLDVSVCSYRPFLTQSE LLEEKDKDPDLYLFTVKKEEQDITFYQELAARARDEQTRKSLLMLADEERRHLERMEEIYAFVETPRTYLENGEFSNLRT L >Mature_161_residues MNVFDCAIKREEDTRTYFEGLVEKATDPELKTLFSMLADCEDEHRKRLLDLKKGMESKTTVLADLDVSVCSYRPFLTQSE LLEEKDKDPDLYLFTVKKEEQDITFYQELAARARDEQTRKSLLMLADEERRHLERMEEIYAFVETPRTYLENGEFSNLRT L
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19065; Mature: 19065
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVFDCAIKREEDTRTYFEGLVEKATDPELKTLFSMLADCEDEHRKRLLDLKKGMESKTT CCHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHE VLADLDVSVCSYRPFLTQSELLEEKDKDPDLYLFTVKKEEQDITFYQELAARARDEQTRK EEEECCHHHHHCCCCCCHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHH SLLMLADEERRHLERMEEIYAFVETPRTYLENGEFSNLRTL HHHHHCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCC >Mature Secondary Structure MNVFDCAIKREEDTRTYFEGLVEKATDPELKTLFSMLADCEDEHRKRLLDLKKGMESKTT CCHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHE VLADLDVSVCSYRPFLTQSELLEEKDKDPDLYLFTVKKEEQDITFYQELAARARDEQTRK EEEECCHHHHHCCCCCCHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHH SLLMLADEERRHLERMEEIYAFVETPRTYLENGEFSNLRTL HHHHHCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA