| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197117552
Identifier: 197117552
GI number: 197117552
Start: 1354291
End: 1355772
Strand: Reverse
Name: 197117552
Synonym: Gbem_1164
Alternate gene names: NA
Gene position: 1355772-1354291 (Counterclockwise)
Preceding gene: 197117562
Following gene: 197117536
Centisome position: 29.38
GC content: 63.5
Gene sequence:
>1482_bases ATGTCAGCATCAGGAAGCGTCAGTCACACTCTGACCGAAGAGATCCTCGCCATCATCGAAGCTGGCGTCGATGCCGATCT CTCCGATGAGAGGTTCAACGACTACTGCATGAAGCTCTTCACCCTGCAGTACGAAACCAACGCCATATTCCGCGAGTTCT GCGACGTGAAGAAGGTCCGCCCGGGGGACATCACCCGTTGGCAGGACGTCCCCATGGTGTACAACGACGTCTTCAAGACC CACCTGGTCGCTTCCTTCCCGCTGGAGCAGTCGGTCATGGCCTGCCTCACCGGGGGTACCACCAGCCTGACCCAGCGCGG CCGCATCTTCCGCGACGAGGACGGCAAGAAGCTCGTCTTCGGCGCCAACAAGATGATGACCAACTCCTACCTCTTCCCCG ACTTCGAGGAAGGGAAGCGCTGCCGCATCCTGATCCTAGCCCCCAGCCCCGAGATGGCCCCTTCCATGGGGATGGCCATC GGCATGGACCAGACCCGCAAGGCCTTCGGCACCCCGGACAGCATGTTCCTTCTGGGCAAGAGCGGGATCGACATCAAGAA CCTTCTGAAGGCGCTGCGCGAGTCGGAGGCAAGCGGGGTTCCCGTCGCCCTCATCGGCGCCACGGCCGCCTACGTCTACT TCTTCCAGGCCTGCCGCCGCAGAAAGATCAGCTTCAAGCTTCCCGCCGGCAGCCGCGTCTGCGACGGCGGCGGCTATCGC GGCCGTTTCGGCGTGGTCACCCGCGACGATTACTACGACATGGTGCAGGAGATCCTGGACGTCCCGCGCACCCACTGCGT GAACGTGTTGGGCGAGGCCGAGACCGCCACCAACCTCTTCGACGACGCCTTGAGGCGCCACGTGAAGGGGCTCCCCGAAA AAAAGCTGGCCCGCCCGGTACCGCCCTGGTCCCGCGTCCTGGCCATGAACATCGACGACCTCTCGCCGCTTCCCGATGGC GAGGTGGGGCTATTGGCCCACTGGGACCTGGCCAACGTCCCCACCGTTTTGGCCGTCATCACCGACAACCTGGGCTACAC CACCGACAACGGCAAAAGCTGCGAGATGGTGGGACGCGCGAAGATCGAGAACGGGAAGGTGTCGCCGCTCCCCGACGAGG AGAGGACCATGGGGCCGATGGGGGACTCCGCCATCTTCCGCATGCTGGAGACCTACACCAACTTCTCCATCGACCTGAAA ATGCGGCTCGCCAAGGACCCGAAGGTTGCTCCGAGCCCCCGCGAGGAGATCGAGGCGAGGCCCGGTTCGGTCGCCTCCTG TCCGCAGGTGGTCGACGAGATCCTCGTCTCGCAGGCGGATAAAGAAGCGGCGGAGCAGAGGGATCTTGCTCTCGGGACTT TCAAGGATCAGACCGAACGCCCGCTCGACTGGTTCTTAGCCGAAGCGGAAAAGCAGAAGCTCATGGACCACCCGGCGGGG CTTAAATCAGAGAAGCCGGCCCCGGCGAAGAAGCCGCAGTAG
Upstream 100 bases:
>100_bases AATACTTGCGTCGTTTTATTATAATCTTGACTGGCACAAAACCTGTAAGTACTATGACCGCTAACGTGTTTTAATAGCCA GCCGTTAAAAGGAGTTTGCC
Downstream 100 bases:
>100_bases CCAACGAGTCTCCCTCCTGCATCCTTCCCCCTCCCACCGGAGGGGGGAGGGCGGGAGGGGGTAAACTAGCCCCTAGCCCC TAGCCCCTAGCCCCCAGCCC
Product: acyl-protein synthetase
Products: NA
Alternate protein names: Acyl-Protein Synthetase LuxE; Long-Chain-Fatty-Acid-Luciferin-Component Ligase; Acyl-Protein Synthetase; Acyl Protein Synthase; Acyl-CoA Synthetase/AMP-Acid Ligse II; Acyl Protein Synthase/Acyl-CoA; Cobalamin
Number of amino acids: Translated: 493; Mature: 492
Protein sequence:
>493_residues MSASGSVSHTLTEEILAIIEAGVDADLSDERFNDYCMKLFTLQYETNAIFREFCDVKKVRPGDITRWQDVPMVYNDVFKT HLVASFPLEQSVMACLTGGTTSLTQRGRIFRDEDGKKLVFGANKMMTNSYLFPDFEEGKRCRILILAPSPEMAPSMGMAI GMDQTRKAFGTPDSMFLLGKSGIDIKNLLKALRESEASGVPVALIGATAAYVYFFQACRRRKISFKLPAGSRVCDGGGYR GRFGVVTRDDYYDMVQEILDVPRTHCVNVLGEAETATNLFDDALRRHVKGLPEKKLARPVPPWSRVLAMNIDDLSPLPDG EVGLLAHWDLANVPTVLAVITDNLGYTTDNGKSCEMVGRAKIENGKVSPLPDEERTMGPMGDSAIFRMLETYTNFSIDLK MRLAKDPKVAPSPREEIEARPGSVASCPQVVDEILVSQADKEAAEQRDLALGTFKDQTERPLDWFLAEAEKQKLMDHPAG LKSEKPAPAKKPQ
Sequences:
>Translated_493_residues MSASGSVSHTLTEEILAIIEAGVDADLSDERFNDYCMKLFTLQYETNAIFREFCDVKKVRPGDITRWQDVPMVYNDVFKT HLVASFPLEQSVMACLTGGTTSLTQRGRIFRDEDGKKLVFGANKMMTNSYLFPDFEEGKRCRILILAPSPEMAPSMGMAI GMDQTRKAFGTPDSMFLLGKSGIDIKNLLKALRESEASGVPVALIGATAAYVYFFQACRRRKISFKLPAGSRVCDGGGYR GRFGVVTRDDYYDMVQEILDVPRTHCVNVLGEAETATNLFDDALRRHVKGLPEKKLARPVPPWSRVLAMNIDDLSPLPDG EVGLLAHWDLANVPTVLAVITDNLGYTTDNGKSCEMVGRAKIENGKVSPLPDEERTMGPMGDSAIFRMLETYTNFSIDLK MRLAKDPKVAPSPREEIEARPGSVASCPQVVDEILVSQADKEAAEQRDLALGTFKDQTERPLDWFLAEAEKQKLMDHPAG LKSEKPAPAKKPQ >Mature_492_residues SASGSVSHTLTEEILAIIEAGVDADLSDERFNDYCMKLFTLQYETNAIFREFCDVKKVRPGDITRWQDVPMVYNDVFKTH LVASFPLEQSVMACLTGGTTSLTQRGRIFRDEDGKKLVFGANKMMTNSYLFPDFEEGKRCRILILAPSPEMAPSMGMAIG MDQTRKAFGTPDSMFLLGKSGIDIKNLLKALRESEASGVPVALIGATAAYVYFFQACRRRKISFKLPAGSRVCDGGGYRG RFGVVTRDDYYDMVQEILDVPRTHCVNVLGEAETATNLFDDALRRHVKGLPEKKLARPVPPWSRVLAMNIDDLSPLPDGE VGLLAHWDLANVPTVLAVITDNLGYTTDNGKSCEMVGRAKIENGKVSPLPDEERTMGPMGDSAIFRMLETYTNFSIDLKM RLAKDPKVAPSPREEIEARPGSVASCPQVVDEILVSQADKEAAEQRDLALGTFKDQTERPLDWFLAEAEKQKLMDHPAGL KSEKPAPAKKPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54561; Mature: 54430
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASGSVSHTLTEEILAIIEAGVDADLSDERFNDYCMKLFTLQYETNAIFREFCDVKKVR CCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEEHHHHHHHHHHHHCCCC PGDITRWQDVPMVYNDVFKTHLVASFPLEQSVMACLTGGTTSLTQRGRIFRDEDGKKLVF CCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHCCCCEECCCCCEEEE GANKMMTNSYLFPDFEEGKRCRILILAPSPEMAPSMGMAIGMDQTRKAFGTPDSMFLLGK ECCHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEECCHHHHHHHCCCCCEEEECC SGIDIKNLLKALRESEASGVPVALIGATAAYVYFFQACRRRKISFKLPAGSRVCDGGGYR CCCCHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHCCCCEEECCCCCEEECCCCCC GRFGVVTRDDYYDMVQEILDVPRTHCVNVLGEAETATNLFDDALRRHVKGLPEKKLARPV CEEEEEECCHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHCCCC PPWSRVLAMNIDDLSPLPDGEVGLLAHWDLANVPTVLAVITDNLGYTTDNGKSCEMVGRA CCHHHEEEECCCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCEECCCCCCEEEEECE KIENGKVSPLPDEERTMGPMGDSAIFRMLETYTNFSIDLKMRLAKDPKVAPSPREEIEAR EECCCCCCCCCCHHHCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCHHHHHCC PGSVASCPQVVDEILVSQADKEAAEQRDLALGTFKDQTERPLDWFLAEAEKQKLMDHPAG CCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCC LKSEKPAPAKKPQ CCCCCCCCCCCCC >Mature Secondary Structure SASGSVSHTLTEEILAIIEAGVDADLSDERFNDYCMKLFTLQYETNAIFREFCDVKKVR CCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEEHHHHHHHHHHHHCCCC PGDITRWQDVPMVYNDVFKTHLVASFPLEQSVMACLTGGTTSLTQRGRIFRDEDGKKLVF CCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHCCCCEECCCCCEEEE GANKMMTNSYLFPDFEEGKRCRILILAPSPEMAPSMGMAIGMDQTRKAFGTPDSMFLLGK ECCHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEECCHHHHHHHCCCCCEEEECC SGIDIKNLLKALRESEASGVPVALIGATAAYVYFFQACRRRKISFKLPAGSRVCDGGGYR CCCCHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHCCCCEEECCCCCEEECCCCCC GRFGVVTRDDYYDMVQEILDVPRTHCVNVLGEAETATNLFDDALRRHVKGLPEKKLARPV CEEEEEECCHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHCCCC PPWSRVLAMNIDDLSPLPDGEVGLLAHWDLANVPTVLAVITDNLGYTTDNGKSCEMVGRA CCHHHEEEECCCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCEECCCCCCEEEEECE KIENGKVSPLPDEERTMGPMGDSAIFRMLETYTNFSIDLKMRLAKDPKVAPSPREEIEAR EECCCCCCCCCCHHHCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCHHHHHCC PGSVASCPQVVDEILVSQADKEAAEQRDLALGTFKDQTERPLDWFLAEAEKQKLMDHPAG CCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCC LKSEKPAPAKKPQ CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA