Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197117546

Identifier: 197117546

GI number: 197117546

Start: 1347700

End: 1349064

Strand: Direct

Name: 197117546

Synonym: Gbem_1158

Alternate gene names: NA

Gene position: 1347700-1349064 (Clockwise)

Preceding gene: 308535221

Following gene: 197117547

Centisome position: 29.2

GC content: 63.81

Gene sequence:

>1365_bases
ATGATGCACTTCCCCGGCCTGCCTACCTGCCTTGTCTGCGCCGGGCTCCTGTTGCCGGCTCTTGCGGGATGTCAACAGCA
GGAGCAAAGCCGCGCTTATCCGGCACCCACCGTAAAGGGTGCCATCGCTACCCCCGCCGTGCTGGCGACCATCCCCCCCG
ACGCTGTATTGACTCCCCCAGGCAGCAGCGATCCCGCCAAGATCGTTGTGAATGAGGAGGGTAAGGGGGCTGTTTACGTT
GCATATCGTAACGGAAAGTCGGTCGTGGTGCATAACGGCCGCTCCGGTCCCGAGTACGACAAAGTGGCCAACGTATCGCT
CAGTCCCGACGGGCAGCACGTGGCCTACGGTGTGACCGTGCAGGAGAAACAGCGGCGCATCGTGTGGGACGGGAGGGAAG
GGGATGTCTACGTCGATGTCTGGAATCCCGTCTTCAGTCCGGACAACCGTCACATAGCCTACATCGCCCAGATCGGTGAG
GACTCACACATCGTTGTAGATGGCAGCATCACCGGCGCCTACCCCTCGCTTCTCAGCGGCAACCCGGTCTTTGCCGCCGA
TGCCTCGCACGTCGCCTTTCACCTCACCCCTGGTGCGGGCGGCAAGGGAAGGCTCGTTGTCGCGAGCCGCGACCTCAAGC
ACCTGAAGAGTTGGGACTGCGTGAACCACGAGATGGTGCTGGACGCGGACAGGACGCGCGCGGCGGCGGTCGTGCCGGCC
GAAGGGAAGCAGCGCGCGGTGATCGTGAGCCTGCTTAATCCCGAAGAAATCAAGGAAGGTCCCCTCTACGAAGAGGTTAC
CGGTCTCACCCTGAGCCCCGACGGCGCCTCGTTCGCCTACGTGGCCGTGAAAGAGGGTAGGCGATACCTGGTCCTCGACG
GTAAGGAGGAGCCTCTCCCGGAGGGCGAAATGCGCCAACCCCCGGTGGTCAAGCCGGGCGGCAAAGGGGCGGGGATCATC
CTGACGACGGGCAAGGGTTTCCGCCTGCACCCGGGCTTTGGCGGCGGCAAAGACGGCAGGAGCTATCAGGAGGCCGCCGG
TCTCATTTACAGCAAGGACGGCAGCCAGACCGCATACCTGGCGCGCAGGGAGAAGAGCATCTTCGCCGTGGTCAACGGGA
AGGAAAGCCCCGGGTACGACATGATCGTAACCCCGAAGTTCTCCCCCGACGGCAGGTTCCTGGTCTGCCGCGCCCGCAAG
GACGGCAGGCGCTTCGTTGTGGTGCTGGACCGTGACGGCAAGGTGGTCCGAGAGCACCCCCGCTACGAGATGGTGTTCGA
CGTTACCTTCACCCCGGACGGCAAATCGGTGGCGTATGGCATCAAGGAGGGGCGGCAGCTCGCCTGGGAGGTGGAAAAGC
TATGA

Upstream 100 bases:

>100_bases
GCCAGCCGGTTAAGTTGCTTGCCATTCTCCCGCAATTTCGGGTATTCTGGCGGCACTTCATTAAGTTGTTGGTGGTTTAC
TCGTTCATGGAGAACACAAC

Downstream 100 bases:

>100_bases
GGCGCTTGCTTTTCGCCCTGAACCTCTCCGCGCTGCTCCTCGCGCTGCTTGTCGCCCCTGCCCTCGCGGCGCCGGCCGAT
CAGGCCGAGCGGAAACTACA

Product: lipoprotein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 454; Mature: 454

Protein sequence:

>454_residues
MMHFPGLPTCLVCAGLLLPALAGCQQQEQSRAYPAPTVKGAIATPAVLATIPPDAVLTPPGSSDPAKIVVNEEGKGAVYV
AYRNGKSVVVHNGRSGPEYDKVANVSLSPDGQHVAYGVTVQEKQRRIVWDGREGDVYVDVWNPVFSPDNRHIAYIAQIGE
DSHIVVDGSITGAYPSLLSGNPVFAADASHVAFHLTPGAGGKGRLVVASRDLKHLKSWDCVNHEMVLDADRTRAAAVVPA
EGKQRAVIVSLLNPEEIKEGPLYEEVTGLTLSPDGASFAYVAVKEGRRYLVLDGKEEPLPEGEMRQPPVVKPGGKGAGII
LTTGKGFRLHPGFGGGKDGRSYQEAAGLIYSKDGSQTAYLARREKSIFAVVNGKESPGYDMIVTPKFSPDGRFLVCRARK
DGRRFVVVLDRDGKVVREHPRYEMVFDVTFTPDGKSVAYGIKEGRQLAWEVEKL

Sequences:

>Translated_454_residues
MMHFPGLPTCLVCAGLLLPALAGCQQQEQSRAYPAPTVKGAIATPAVLATIPPDAVLTPPGSSDPAKIVVNEEGKGAVYV
AYRNGKSVVVHNGRSGPEYDKVANVSLSPDGQHVAYGVTVQEKQRRIVWDGREGDVYVDVWNPVFSPDNRHIAYIAQIGE
DSHIVVDGSITGAYPSLLSGNPVFAADASHVAFHLTPGAGGKGRLVVASRDLKHLKSWDCVNHEMVLDADRTRAAAVVPA
EGKQRAVIVSLLNPEEIKEGPLYEEVTGLTLSPDGASFAYVAVKEGRRYLVLDGKEEPLPEGEMRQPPVVKPGGKGAGII
LTTGKGFRLHPGFGGGKDGRSYQEAAGLIYSKDGSQTAYLARREKSIFAVVNGKESPGYDMIVTPKFSPDGRFLVCRARK
DGRRFVVVLDRDGKVVREHPRYEMVFDVTFTPDGKSVAYGIKEGRQLAWEVEKL
>Mature_454_residues
MMHFPGLPTCLVCAGLLLPALAGCQQQEQSRAYPAPTVKGAIATPAVLATIPPDAVLTPPGSSDPAKIVVNEEGKGAVYV
AYRNGKSVVVHNGRSGPEYDKVANVSLSPDGQHVAYGVTVQEKQRRIVWDGREGDVYVDVWNPVFSPDNRHIAYIAQIGE
DSHIVVDGSITGAYPSLLSGNPVFAADASHVAFHLTPGAGGKGRLVVASRDLKHLKSWDCVNHEMVLDADRTRAAAVVPA
EGKQRAVIVSLLNPEEIKEGPLYEEVTGLTLSPDGASFAYVAVKEGRRYLVLDGKEEPLPEGEMRQPPVVKPGGKGAGII
LTTGKGFRLHPGFGGGKDGRSYQEAAGLIYSKDGSQTAYLARREKSIFAVVNGKESPGYDMIVTPKFSPDGRFLVCRARK
DGRRFVVVLDRDGKVVREHPRYEMVFDVTFTPDGKSVAYGIKEGRQLAWEVEKL

Specific function: Unknown

COG id: COG2319

COG function: function code R; FOG: WD40 repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48891; Mature: 48891

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMHFPGLPTCLVCAGLLLPALAGCQQQEQSRAYPAPTVKGAIATPAVLATIPPDAVLTPP
CCCCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCEEEEECCCCCEECCC
GSSDPAKIVVNEEGKGAVYVAYRNGKSVVVHNGRSGPEYDKVANVSLSPDGQHVAYGVTV
CCCCCCEEEEECCCCCEEEEEEECCCEEEEECCCCCCCHHHEEEEEECCCCCEEEEEEEE
QEKQRRIVWDGREGDVYVDVWNPVFSPDNRHIAYIAQIGEDSHIVVDGSITGAYPSLLSG
CCCCCEEEEECCCCCEEEEECCCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCHHHHCC
NPVFAADASHVAFHLTPGAGGKGRLVVASRDLKHLKSWDCVNHEMVLDADRTRAAAVVPA
CEEEEECCCEEEEEEECCCCCCCEEEEEECCHHHHHCCCCCCCEEEEECCCCCEEEEECC
EGKQRAVIVSLLNPEEIKEGPLYEEVTGLTLSPDGASFAYVAVKEGRRYLVLDGKEEPLP
CCCCCEEEEEECCHHHHCCCCCHHHHCCCEECCCCCCEEEEEEECCCEEEEECCCCCCCC
EGEMRQPPVVKPGGKGAGIILTTGKGFRLHPGFGGGKDGRSYQEAAGLIYSKDGSQTAYL
CCCCCCCCEECCCCCCCEEEEECCCCEEECCCCCCCCCCCCHHHHCCEEEECCCCCEEEE
ARREKSIFAVVNGKESPGYDMIVTPKFSPDGRFLVCRARKDGRRFVVVLDRDGKVVREHP
EECCCEEEEEEECCCCCCCCEEEECCCCCCCCEEEEEECCCCCEEEEEECCCCCEEECCC
RYEMVFDVTFTPDGKSVAYGIKEGRQLAWEVEKL
CEEEEEEEEECCCCCEEEEECCCCCEEEEEEECC
>Mature Secondary Structure
MMHFPGLPTCLVCAGLLLPALAGCQQQEQSRAYPAPTVKGAIATPAVLATIPPDAVLTPP
CCCCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCEEEEECCCCCEECCC
GSSDPAKIVVNEEGKGAVYVAYRNGKSVVVHNGRSGPEYDKVANVSLSPDGQHVAYGVTV
CCCCCCEEEEECCCCCEEEEEEECCCEEEEECCCCCCCHHHEEEEEECCCCCEEEEEEEE
QEKQRRIVWDGREGDVYVDVWNPVFSPDNRHIAYIAQIGEDSHIVVDGSITGAYPSLLSG
CCCCCEEEEECCCCCEEEEECCCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCHHHHCC
NPVFAADASHVAFHLTPGAGGKGRLVVASRDLKHLKSWDCVNHEMVLDADRTRAAAVVPA
CEEEEECCCEEEEEEECCCCCCCEEEEEECCHHHHHCCCCCCCEEEEECCCCCEEEEECC
EGKQRAVIVSLLNPEEIKEGPLYEEVTGLTLSPDGASFAYVAVKEGRRYLVLDGKEEPLP
CCCCCEEEEEECCHHHHCCCCCHHHHCCCEECCCCCCEEEEEEECCCEEEEECCCCCCCC
EGEMRQPPVVKPGGKGAGIILTTGKGFRLHPGFGGGKDGRSYQEAAGLIYSKDGSQTAYL
CCCCCCCCEECCCCCCCEEEEECCCCEEECCCCCCCCCCCCHHHHCCEEEECCCCCEEEE
ARREKSIFAVVNGKESPGYDMIVTPKFSPDGRFLVCRARKDGRRFVVVLDRDGKVVREHP
EECCCEEEEEEECCCCCCCCEEEECCCCCCCCEEEEEECCCCCEEEEEECCCCCEEECCC
RYEMVFDVTFTPDGKSVAYGIKEGRQLAWEVEKL
CEEEEEEEEECCCCCEEEEECCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA