| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is cheX-3
Identifier: 197117278
GI number: 197117278
Start: 1040423
End: 1040923
Strand: Direct
Name: cheX-3
Synonym: Gbem_0888
Alternate gene names: NA
Gene position: 1040423-1040923 (Clockwise)
Preceding gene: 197117277
Following gene: 197117283
Centisome position: 22.54
GC content: 59.08
Gene sequence:
>501_bases TTGAGCAGTATCACGTTCGAAGAAATCATGTTCACCATCATGTCCGCCACGCAGGATACCTTCAAGAGCTACATGAACAC AGACATCTTCGCGGGGAAGGTGGAAAAGAAGATAAACCCGCTGCATAGCGACGTGGTCGGCATCGTCGGGGTCGCCGGAG ACCGGGTCGGCTACATCCTCTTCGCCACCGAGAAAGGGTCGGCCGAGCAGATAGCGAAGGAACTCATGATGATGGACGAG GCGGACGACGAATCGATCAACGACGCGGTGGGCGAGGTGGTCAACAACATCGCCGGCGTGTTCAAGACCAAGTACCACGA GCAGTACGGCAGCGTGGCGCTGGGACTTCCCCTGGTACTCTCCGGCCGCCTGAGGCCGATCACCGACCCTCCCGAGCAGG CGGCTAGCGACGGGAGCATGGTGGTTCAATGCAAGGGGGTAACCATCCCCTTCACCACCATGGACGGCAGGCTCACGTTC CGGGTCATGGTCTACATGTAA
Upstream 100 bases:
>100_bases GTTATGAATACCACGGCATTTAGTTGTCAATTATCAATTGTCAATTGTCAATTGGTTTAAGACCAAGCGTCAATTGCCAA TTGAACCTCAGGAGGTTGCC
Downstream 100 bases:
>100_bases CGGCTGGGGCTAGGGGCTAGGGGCTGGATAGACTGCACGGCCACCGGTCCTGTTTATACGGCTCCTCCTCAGCTACTCCT CCAACGGAAAAGCCCCCGCT
Product: chemotaxis protein phosphatase CheX
Products: NA
Alternate protein names: Chemotaxis Protein Phosphatase CheX
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MSSITFEEIMFTIMSATQDTFKSYMNTDIFAGKVEKKINPLHSDVVGIVGVAGDRVGYILFATEKGSAEQIAKELMMMDE ADDESINDAVGEVVNNIAGVFKTKYHEQYGSVALGLPLVLSGRLRPITDPPEQAASDGSMVVQCKGVTIPFTTMDGRLTF RVMVYM
Sequences:
>Translated_166_residues MSSITFEEIMFTIMSATQDTFKSYMNTDIFAGKVEKKINPLHSDVVGIVGVAGDRVGYILFATEKGSAEQIAKELMMMDE ADDESINDAVGEVVNNIAGVFKTKYHEQYGSVALGLPLVLSGRLRPITDPPEQAASDGSMVVQCKGVTIPFTTMDGRLTF RVMVYM >Mature_165_residues SSITFEEIMFTIMSATQDTFKSYMNTDIFAGKVEKKINPLHSDVVGIVGVAGDRVGYILFATEKGSAEQIAKELMMMDEA DDESINDAVGEVVNNIAGVFKTKYHEQYGSVALGLPLVLSGRLRPITDPPEQAASDGSMVVQCKGVTIPFTTMDGRLTFR VMVYM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18131; Mature: 18000
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 6.6 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 6.1 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSITFEEIMFTIMSATQDTFKSYMNTDIFAGKVEKKINPLHSDVVGIVGVAGDRVGYIL CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHEEECCCCEEEEE FATEKGSAEQIAKELMMMDEADDESINDAVGEVVNNIAGVFKTKYHEQYGSVALGLPLVL EEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHEE SGRLRPITDPPEQAASDGSMVVQCKGVTIPFTTMDGRLTFRVMVYM CCCCCCCCCCHHHHCCCCCEEEEECCCEEEEEECCCCEEEEEEEEC >Mature Secondary Structure SSITFEEIMFTIMSATQDTFKSYMNTDIFAGKVEKKINPLHSDVVGIVGVAGDRVGYIL CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHEEECCCCEEEEE FATEKGSAEQIAKELMMMDEADDESINDAVGEVVNNIAGVFKTKYHEQYGSVALGLPLVL EEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHEE SGRLRPITDPPEQAASDGSMVVQCKGVTIPFTTMDGRLTFRVMVYM CCCCCCCCCCHHHHCCCCCEEEEECCCEEEEEECCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA